trnaf-gaa_12


Basic Information

Item Value
gene id trnaf-gaa_12
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 6518241 ~ 6518313 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_395
gccgaaatagctcagttgggagagcattagactgaagatctaaaggtccctggttcaaTCCTGGGTTTCGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_395 True 73 tRNA 0.49 1 6518241 6518313

Neighbor

gene id symbol gene type direction distance location
LOC120566943 NA coding upstream 349709 6156479 ~ 6168532 (+)
cenpu NA coding upstream 394656 6111094 ~ 6123585 (+)
LOC120567168 LOC103373597 coding upstream 409086 6079087 ~ 6109155 (+)
st3gal5 NA coding upstream 440632 6032764 ~ 6077609 (+)
LOC120567500 NA coding upstream 517328 6000777 ~ 6000913 (+)
LOC120567385 LOC107574244 coding downstream 29614 6547927 ~ 6552607 (+)
trnaf-gaa_30 NA coding downstream 30416 6548729 ~ 6548801 (+)
trnaf-gaa_31 NA coding downstream 30934 6549247 ~ 6549319 (+)
trnaf-gaa_32 NA coding downstream 31453 6549766 ~ 6549838 (+)
LOC120567386 NA coding downstream 36539 6554852 ~ 6556324 (+)
trnaf-gaa_11 NA non-coding upstream 534 6517635 ~ 6517707 (+)
trnaf-gaa_10 NA non-coding upstream 6983 6511186 ~ 6511258 (+)
trnaf-gaa_9 NA non-coding upstream 8633 6509536 ~ 6509608 (+)
G103742 NA non-coding upstream 11074 6506866 ~ 6507167 (+)
G103739 NA non-coding upstream 35326 6482596 ~ 6482915 (+)
trnaf-gaa_13 NA non-coding downstream 534 6518847 ~ 6518919 (+)
trnaf-gaa_14 NA non-coding downstream 1052 6519365 ~ 6519437 (+)
trnaf-gaa_15 NA non-coding downstream 2508 6520821 ~ 6520893 (+)
trnaf-gaa_16 NA non-coding downstream 3445 6521758 ~ 6521830 (+)
trnaf-gaa_17 NA non-coding downstream 6102 6524415 ~ 6524487 (+)
irf2 irf2 other upstream 327677 6177996 ~ 6190564 (+)
G103305 NA other upstream 2448627 4068811 ~ 4069614 (+)
smad5 LOC103363483,LOC104920560,LOC103391130,LOC101064562 other upstream 2645408 3860635 ~ 3872833 (+)
G103034 NA other upstream 3002524 3514023 ~ 3515717 (+)
zgc:110843 cisd1 other upstream 3266610 3247545 ~ 3251631 (+)
trnam-cau_9 NA other downstream 337869 6856182 ~ 6856254 (+)
G103836 NA other downstream 1103325 7621638 ~ 7643183 (+)
LOC120567362 NA other downstream 1821103 8339416 ~ 8346534 (+)
LOC120567404 LOC104951845 other downstream 1956303 8474616 ~ 8476449 (+)
G104301 NA other downstream 3399559 9917872 ~ 9918315 (+)

Expression


Co-expression Network