Gene
RNA
| Item | Value |
|---|---|
| RNA id | unassigned_transcript_395 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.49 |
| exon number | 1 |
| gene id | trnaf-gaa_12 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 6518241 ~ 6518313 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU139519 | lncRNA | upstream | 11074 | 6506866 ~ 6507167 (+) | True | G103742 |
| TU139516 | lncRNA | upstream | 35326 | 6482596 ~ 6482915 (+) | True | G103739 |
| TU139511 | lncRNA | upstream | 149051 | 6368865 ~ 6369190 (+) | True | G103734 |
| TU139376 | lncRNA | upstream | 597701 | 5917239 ~ 5920540 (+) | True | G103631 |
| TU139375 | lncRNA | upstream | 601377 | 5916553 ~ 5916864 (+) | True | G103630 |
| XR_005640368.1 | lncRNA | downstream | 35848 | 6554161 ~ 6554829 (+) | True | LOC120566291 |
| TU139521 | lncRNA | downstream | 136659 | 6654972 ~ 6655228 (+) | True | G103744 |
| TU139530 | lncRNA | downstream | 195640 | 6713953 ~ 6714209 (+) | True | G103752 |
| TU139531 | lncRNA | downstream | 202937 | 6721250 ~ 6721597 (+) | True | G103753 |
| TU139570 | lncRNA | downstream | 596968 | 7115281 ~ 7115562 (+) | True | G103788 |
| XM_039813595.1 | mRNA | upstream | 327677 | 6178291 ~ 6190564 (+) | False | irf2 |
| XM_039813594.1 | mRNA | upstream | 327678 | 6177998 ~ 6190563 (+) | True | irf2 |
| XM_039813663.1 | mRNA | upstream | 349709 | 6156479 ~ 6168532 (+) | True | LOC120566943 |
| XM_039812601.1 | mRNA | upstream | 394656 | 6111751 ~ 6123585 (+) | True | cenpu |
| XM_039814342.1 | mRNA | downstream | 29614 | 6547927 ~ 6552607 (+) | True | LOC120567385 |
| XM_039814343.1 | mRNA | downstream | 36539 | 6554852 ~ 6556324 (+) | True | LOC120567386 |
| XM_039814362.1 | mRNA | downstream | 1603257 | 8121570 ~ 8122651 (+) | True | LOC120567399 |
| XM_039814314.1 | mRNA | downstream | 1617011 | 8135324 ~ 8138663 (+) | True | LOC120567357 |
| XM_039814326.1 | mRNA | downstream | 1821424 | 8339737 ~ 8346534 (+) | False | LOC120567362 |
| unassigned_transcript_394 | other | upstream | 534 | 6517635 ~ 6517707 (+) | True | trnaf-gaa_11 |
| unassigned_transcript_393 | other | upstream | 6983 | 6511186 ~ 6511258 (+) | True | trnaf-gaa_10 |
| unassigned_transcript_392 | other | upstream | 8633 | 6509536 ~ 6509608 (+) | True | trnaf-gaa_9 |
| XR_005640485.1 | other | upstream | 330049 | 6177996 ~ 6188192 (+) | False | irf2 |
| XR_005640592.1 | other | upstream | 517328 | 6000777 ~ 6000913 (+) | True | LOC120567500 |
| unassigned_transcript_396 | other | downstream | 534 | 6518847 ~ 6518919 (+) | True | trnaf-gaa_13 |
| unassigned_transcript_397 | other | downstream | 1052 | 6519365 ~ 6519437 (+) | True | trnaf-gaa_14 |
| unassigned_transcript_398 | other | downstream | 2508 | 6520821 ~ 6520893 (+) | True | trnaf-gaa_15 |
| unassigned_transcript_399 | other | downstream | 3445 | 6521758 ~ 6521830 (+) | True | trnaf-gaa_16 |
| unassigned_transcript_400 | other | downstream | 6102 | 6524415 ~ 6524487 (+) | True | trnaf-gaa_17 |
