LOC120570932


Basic Information

Item Value
gene id LOC120570932
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 32408383 ~ 32415662 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819629.1
ATGTCGCCAGACGCCCGAGCCCTGGAGGACCTGCTGTACGCCGGTGACCTTGGTGACGAGGGGGAGGGGGCGGGGCCAGGCAGCCGAGGCCCAGCGGGGACGGAGGAAAGTGCTGCTGCAGACAATGAGCCAATGACGTGTGCCGGCTGCGGCGAGCAGGTGTGCGACCGCTTCTTCCTATTGGCTGCCGGCTGCGTGTGGCACGGTGTGTGCCTCCGCTGCAGCCAGTGTCACTGCGAGCTGCAGACGCACCCCTCGCTTTACTGGAGAGACGGACACATCTACTGCCAGGAAGACTACTGCAGGATGTTTGGCGGCGGTCAGTGCGCTCGCTGCTTCCAGCCAATCCCAGCCTCCGCTTTGGTCATGAGGTCTGGAGATCTGACCTTCCACCCTCACTGCTTCTCCTGCCAGGAGTGTGATGTGGCATTAATACCAGGGAACCTGTACTGCATGCAGGGCCAGAACCTCTACTGTCAGTCCCATTATCATGTTGACGATCTCCAGCCTAAACCCGGTCTGAAAGAAgCTCTGAATCAGGTCTCAGGTGAAGGGGAGGAGTCGGTCAGCAGTCCTGAGCCACGATTGGACGACAGGGCGACAGGCGGGCGGAGCCGCAGGCGGTCCAAGCGAATTAGGACGTGTTTCCGCAGCGAGCAGCTCAGAGCGCTGGAGTCGTATTTCGCTCAGAAACACAACCCCGACGGTAAAGACTGGAACTGCCTCGCGCACAAGACCGGCCTGCCCAAGAGAGTCCTGCAGgtGTGGTTTCAAAACGCTCGGGCCAAACTGAGACGCTCCCTCACCGCCGATGACTCTCAGGTCAATTCGCCCTCCGCTCCCCAGGGAGGCGTAACCGTGGCGACTGGCTCCCCATCCCCATCCTGCTCCCCGGCCGACCAATCACAGCCCTTCTCTTCTAACACCAGCACCATCGACCAGCTGCAGCTCGCTCTGCTCACCGCCCCGCTCACCCCACCGCTGGCGAGCCCGGCCGCCAGCCAGTCGCTTCAGCTGCGAAGCCCCGCCTTCTTCCTGGACTACGACTCCCAGAGTGCACCAGGGTGCATCTCCTCTCTGGAGGCCTTCGAGGACTTCGGAGAGCCAGGAGGAGGAGCGGAGGGAGATGTTGATTCTGATAGTTCTTATAGACCGCATTACTGCTGA

Function

GO: NA

KEGG:

id description
K09373 LHX2_9; LIM homeobox protein 2/9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819629.1 True 1167 mRNA 0.62 6 32408383 32415662

Neighbor

gene id symbol gene type direction distance location
LOC120571106 NA coding upstream 9641 32348283 ~ 32398742 (+)
atf6b atf6b coding upstream 131818 32244994 ~ 32276565 (+)
LOC120571701 NA coding upstream 456190 31933992 ~ 31952193 (+)
vps52 vps52 coding upstream 490540 31881882 ~ 31917843 (+)
LOC120571697 ring1 coding upstream 537995 31860945 ~ 31870388 (+)
LOC120570933 NA coding downstream 7550 32423212 ~ 32426098 (+)
LOC120571113 NA coding downstream 14752 32430414 ~ 32451519 (+)
LOC120571114 NA coding downstream 38535 32454197 ~ 32535677 (+)
LOC120571111 NA coding downstream 67388 32483050 ~ 32512626 (+)
LOC120571110 NA coding downstream 100794 32516456 ~ 32529882 (+)
G138068 NA non-coding upstream 1360 32406664 ~ 32407023 (+)
G137981 NA non-coding upstream 124490 32282111 ~ 32283893 (+)
G137983 NA non-coding upstream 126405 32281455 ~ 32281978 (+)
G137970 NA non-coding upstream 262892 32144610 ~ 32145491 (+)
G137956 NA non-coding upstream 280024 32107861 ~ 32128359 (+)
G138083 NA non-coding downstream 136349 32552011 ~ 32554565 (+)
G138111 NA non-coding downstream 291180 32706842 ~ 32707949 (+)
G138116 NA non-coding downstream 300328 32715990 ~ 32718124 (+)
G138117 NA non-coding downstream 317148 32732810 ~ 32740022 (+)
G138118 NA non-coding downstream 322583 32738245 ~ 32857673 (+)
LOC120571558 NA other upstream 404703 31995001 ~ 32003680 (+)
LOC120570800 NA other upstream 724931 31617595 ~ 31683452 (+)
G137773 NA other upstream 1471526 30921166 ~ 30936857 (+)
G137743 NA other upstream 1661375 30745785 ~ 30747008 (+)
rnf139 rnf139,LOC106674496 other upstream 1749944 30571463 ~ 30658439 (+)
G138076 NA other downstream 14748 32430410 ~ 32504976 (+)
LOC120571115 NA other downstream 122615 32538277 ~ 32566162 (+)
G138105 NA other downstream 225979 32641641 ~ 32699309 (+)
G138130 NA other downstream 568100 32983762 ~ 33020409 (+)
LOC120572048 NA other downstream 746714 33162376 ~ 33200180 (+)

Expression


Co-expression Network