LOC120570794


Basic Information

Item Value
gene id LOC120570794
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 31847055 ~ 31849340 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641131.1
GAGTCCTACCATATAAATAGAGCAGAAGACAGGGAGCAAAAGACAAACtcaaggagaggagagacacagCAAGATACGCCAAGGAAACAGAATCAATTCACTTTGCCTGACTTCACTACAACAGCCAAGAGGTTCATCTGAAATTCTGGAAGAGAAAgtggaggagaaaagaaacAGTTCACAATGATCATCAAGACGTTTATCGTTGTCCTTACACTTCTTGCATTCAACAGTCAGCCTGCTGAAGGAAGCCTGAGACAGAAATGTCCCACAGGAAACACCACTATGgccccaacaacaacaccaTCACACGCAGAAATTGCAGCAACTGCAGCAATAGCAAGTGCgaaagcagcagcaacagcggcatcaatagcagcagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641131.1 True 384 lncRNA 0.46 3 31847055 31849340

Neighbor

gene id symbol gene type direction distance location
LOC120570797 NA coding upstream 45373 31799108 ~ 31801682 (+)
LOC120571681 NA coding upstream 375888 31468125 ~ 31471167 (+)
si:ch211-264f5.6 NA coding upstream 680965 31119789 ~ 31166090 (+)
LOC120571534 NA coding upstream 736630 31103816 ~ 31110425 (+)
tmem65 tmem65,LOC103374125 coding upstream 1211082 30591473 ~ 30635973 (+)
LOC120571697 ring1 coding downstream 11605 31860945 ~ 31870388 (+)
vps52 vps52 coding downstream 32542 31881882 ~ 31917843 (+)
LOC120571701 NA coding downstream 84652 31933992 ~ 31952193 (+)
atf6b atf6b coding downstream 395654 32244994 ~ 32276565 (+)
LOC120571106 NA coding downstream 498943 32348283 ~ 32398742 (+)
G137879 NA non-coding upstream 123449 31721804 ~ 31723606 (+)
G137836 NA non-coding upstream 356996 31489860 ~ 31490059 (+)
G137834 NA non-coding upstream 540014 31306827 ~ 31307041 (+)
G137832 NA non-coding upstream 568490 31278145 ~ 31278565 (+)
G137831 NA non-coding upstream 576558 31270094 ~ 31270497 (+)
G137915 NA non-coding downstream 19795 31869135 ~ 31920674 (+)
G137929 LOC103374120 non-coding downstream 94457 31943797 ~ 31948488 (+)
G137952 NA non-coding downstream 250703 32100043 ~ 32100373 (+)
G137953 NA non-coding downstream 253544 32102884 ~ 32103176 (+)
G137956 NA non-coding downstream 258521 32107861 ~ 32128359 (+)
LOC120570800 NA other upstream 163603 31617595 ~ 31683452 (+)
G137773 NA other upstream 910198 30921166 ~ 30936857 (+)
G137743 NA other upstream 1100047 30745785 ~ 30747008 (+)
rnf139 rnf139,LOC106674496 other upstream 1188616 30571463 ~ 30658439 (+)
LOC120570927 NA other upstream 1329165 30516558 ~ 30517890 (+)
LOC120571558 NA other downstream 145661 31995001 ~ 32003680 (+)
G138076 NA other downstream 581070 32430410 ~ 32504976 (+)
LOC120571115 NA other downstream 688937 32538277 ~ 32566162 (+)
G138105 NA other downstream 792301 32641641 ~ 32699309 (+)
G138130 NA other downstream 1134422 32983762 ~ 33020409 (+)

Expression


Co-expression Network