G150984 (LOC103358683,LOC104942087,LOC104930238)


Basic Information

Item Value
gene id G150984
gene name LOC103358683,LOC104942087,LOC104930238
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2212955 ~ 2215000 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204444
ATGTTGCATTCTGATAAACACAGTTGTTAATGAAATGAAgcttcttctttattttttaaatgtgaagtgTAACACTGGCTCATACTGTACATCCAACCAACCAGTTAGGCCCTgtgttacattccatctgtagtccattgctactggataatagggtGGGaacagggctgtgggaacatagggctgtgggaacatagggctgtgggaacatagggctgtgggaacatagggctgtgggaacataggcacgctcccctgGCAAGAAACAGAGCAGCATCCCTTAAAAAGTGTTAGGTGACATGTCCCCTTTTCTTCTGTTTAAATCTTCTTAACACTGTTTTTCTCTGAGTTCTGAAAGGAGCTGACATCCCAGCGAACGGAGCGGAAGGTGCTCCCTTTGAAGCTGGCCTGTCTTTTGGTGATGCGGTAGATTTTCCTGAGGACGGCGCGTCTCAGCAGGATGTAGACCCACGGGTCCAGGATCTGGTTGCAGGTGGCCATCCTGACGCCCATCATCATCAGCCTCCTATAAGTGTCTCTGTCATTGCCCAGGAAGCCACTGTAGGACCGCGTGGCTGACATCAGTCCAAagac
>TU204445
ATGTTGCATTCTGATAAACACAGTTGTTAATGAAATGAAgcttcttctttattttttaaatgtgaagtgTAACACTGGCTCATACTGTACATCCAACCAACCAGTTAGGCCCTgtgttacattccatctgtagtccattgctactggataatagggtGGGaacagggctgtgggaacatagagctgtgggaccatagagctgtgggaccatagagctgtggga

Function

NR:

description
PREDICTED: prostaglandin E2 receptor EP1 subtype-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204444 True 594 lncRNA 0.49 3 2212955 2215000
TU204445 False 223 lncRNA 0.43 2 2212955 2213365

Neighbor

gene id symbol gene type direction distance location
LOC120575157 gcdh,LOC102794743,LOC101471797,LOC102209187,LOC100704678 coding upstream 93832 2091477 ~ 2119123 (+)
LOC120573865 NA coding upstream 436384 1767641 ~ 1776571 (+)
jmjd8 jmjd8 coding upstream 714855 1485594 ~ 1498100 (+)
LOC120573834 NA coding upstream 793057 1402982 ~ 1419898 (+)
LOC120573839 NA coding upstream 1105659 1068480 ~ 1107296 (+)
trappc5 LOC103358680,LOC104930124,LOC100705746 coding downstream 238750 2453750 ~ 2459249 (+)
LOC120574835 mcoln1,LOC104930122,LOC101475291,LOC102295873,LOC106517836 coding downstream 246243 2461243 ~ 2493919 (+)
wu:fb95e10 NA coding downstream 305715 2520715 ~ 2581298 (+)
engl NA coding downstream 483926 2698926 ~ 2733225 (+)
si:ch211-106h11.1 LOC103371866,LOC102800031 coding downstream 555369 2770369 ~ 2783645 (+)
G150974 NA non-coding upstream 17116 2189197 ~ 2195839 (+)
G150966 NA non-coding upstream 38741 2171057 ~ 2174214 (+)
G150962 NA non-coding upstream 55050 2156629 ~ 2157905 (+)
G150958 NA non-coding upstream 65929 2145332 ~ 2147026 (+)
G150948 NA non-coding upstream 91286 2121337 ~ 2121669 (+)
G151045 NA non-coding downstream 59813 2274813 ~ 2275121 (+)
G151052 NA non-coding downstream 91969 2306969 ~ 2307300 (+)
G151054 NA non-coding downstream 121034 2336034 ~ 2397394 (+)
G151062 NA non-coding downstream 135321 2350321 ~ 2351235 (+)
G151063 NA non-coding downstream 136851 2351851 ~ 2353552 (+)
G150905 NA other upstream 145307 1936920 ~ 2067648 (+)
G150804 NA other upstream 444061 1761280 ~ 1768894 (+)
G150386 NA other upstream 887855 1324062 ~ 1325100 (+)
G150465 LOC105897445 other upstream 904582 1284929 ~ 1308373 (+)
G150388 NA other upstream 958935 1235548 ~ 1254020 (+)
LOC120574078 LOC103371863,LOC106930631,LOC103154952,LOC106957020,LOC105929964 other downstream 430826 2645826 ~ 2691562 (+)
G151122 LOC103375031,LOC102776069 other downstream 584469 2799469 ~ 2802221 (+)
G151240 NA other downstream 786899 3001899 ~ 3003364 (+)
junbb LOC103364966,LOC107087652,LOC104932219,LOC100707881,LOC105929935 other downstream 868898 3083898 ~ 3104592 (+)
G151315 NA other downstream 931504 3146504 ~ 3147977 (+)

Expression


Co-expression Network