G151240


Basic Information

Item Value
gene id G151240
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3001899 ~ 3003364 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204936
tcgtgattcatcgagatatcgaatcgaagacatgataatcgtaatcgaaagatcagtgaagattcacacctctagtatccatccatccatccatccatccaatctttgcagctcttcaAAAGTAGCGCACTAACCCATACTTACTTCTGAGTCGTCTTTCTGCTTCTTCGCAACCATGCCGGTCTTTAGGAACACACCACCTCTGCGCTTCCCCACAAAGCTGGTCACGGGAGGGGGCTTCTTTTCCACTGATGTCTGTCCTTGCTCGGTGGtggctctcctctcctctccacctgtTTGCTGcgtctcttttttcctcttctcctcctcctccatcttcttCTTGAACATCTCCATGAAGCTGCCGTCGTTGGCGAAGGCGTTTCCCCCGGGCACCGGGGCTTTGCTCGCCGCCGGTGCGGGTCTGCTGGAGGGCGACGCGGGGCTGCCGCAGCTCGAgtcgccgctgctgctgctgctgctgcctccgCCGGGTCTGGCCGTCTGAGGTCTTCCGTGTGAGCGCTTTGAATCCATGTTCTCGTAATGTTCCCCAACGGGTACAGTCCGTTTTCGGAGAAGTTGGCTTTGTTGCGAAGCTGGCATCAAATAAACAACCGTGCCAACACGCTGCAAGACGGGCAGGACCCGGACCCCACCCCGGACCCCAACACACAACTAAAACCTCCGCAGGttagctaaaaaaaaagctacaagtccagttcaaaaaaacacacaaagaaaagggCGAAATATAAAAAGGTTAACGAGGCTTCCCGGTGCCAGCCTTCTAGCgcataacgttaacgttaacgttacaaaaacaaaagcaggcgCTGGTCTGCTAACGTGGCTAACACTGCGGGCTAACGTCCGGTTTAGTGAGGCCTTTTACGGACAAACACACTCAACTAGAACCTCCATTTAACGGGTGAAATGTTCCCAAATACAATGCTACCGTTAAAGCACGCAACAAAGTTCAAATACCCGCAGCAAAGACTGAGAGGTTCGCAGATTTTACCCAACGCGTTTAGCTAACTTTCGCCATCTAGCACCGACTGGCTGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204936 True 1068 TUCP 0.52 2 3001899 3003364

Neighbor

gene id symbol gene type direction distance location
ubn2b NA coding upstream 15046 2957932 ~ 2986853 (+)
rpsa rpsa coding upstream 48389 2947411 ~ 2953510 (+)
LOC120574090 LOC101479176,LOC102292774,LOC102776828 coding upstream 60280 2931036 ~ 2941619 (+)
LOC120574089 LOC103376082 coding upstream 73702 2873955 ~ 2928197 (+)
txn2 LOC104942977 coding upstream 140830 2843580 ~ 2861069 (+)
LOC120574496 LOC100710752 coding downstream 160853 3164217 ~ 3255883 (+)
smarca4a smarca4 coding downstream 280244 3283608 ~ 3321386 (+)
kri1 kri1,LOC105353547 coding downstream 365450 3368814 ~ 3384569 (+)
LOC120575509 NA coding downstream 377923 3381287 ~ 3381386 (+)
LOC120575510 NA coding downstream 379150 3382514 ~ 3382613 (+)
G151244 NA non-coding upstream 3640 2998057 ~ 2998259 (+)
G151243 NA non-coding upstream 4525 2997109 ~ 2997374 (+)
G151130 NA non-coding upstream 57288 2937484 ~ 2944611 (+)
G151131 NA non-coding upstream 60863 2940609 ~ 2941036 (+)
G151106 NA non-coding upstream 72169 2637789 ~ 2929730 (+)
G151247 NA non-coding downstream 2254 3005618 ~ 3015522 (+)
G151292 LOC103364965 non-coding downstream 119378 3122742 ~ 3141705 (+)
G151312 NA non-coding downstream 141890 3145254 ~ 3145605 (+)
G151321 NA non-coding downstream 203135 3206499 ~ 3207465 (+)
G151318 NA non-coding downstream 211536 3214900 ~ 3261498 (+)
G151122 LOC103375031,LOC102776069 other upstream 199678 2799469 ~ 2802221 (+)
LOC120574078 LOC103371863,LOC106930631,LOC103154952,LOC106957020,LOC105929964 other upstream 310337 2645826 ~ 2691562 (+)
G150960 NA other upstream 784900 2148731 ~ 2216999 (+)
G150905 NA other upstream 934251 1936920 ~ 2067648 (+)
G150804 NA other upstream 1233005 1761280 ~ 1768894 (+)
junbb LOC103364966,LOC107087652,LOC104932219,LOC100707881,LOC105929935 other downstream 80534 3083898 ~ 3104592 (+)
G151315 NA other downstream 143140 3146504 ~ 3147977 (+)
LOC120573829 NA other downstream 240246 3243610 ~ 3277604 (+)
ldlra ldlr other downstream 327640 3331004 ~ 3357195 (+)
G151471 NA other downstream 655633 3658997 ~ 3663282 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) trir c12h19orf43,si:ch73-152o7.1 misc NC_047623.1 CM018569.1 3578574 ~ 3582915 (+)