kri1 (kri1,LOC105353547)


Basic Information

Item Value
gene id kri1
gene name kri1,LOC105353547
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3368814 ~ 3384569 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826330.1
TTGTAGTCCGTCCGGACTCCGGAAGCCACCTGGTTCAGCTTTCCACACGCGCATGCTGTAGTTGGAATGACTTCCCTTTAATAGCGTGTAGTTTTAACTATCTGTAATATCATTCTTTTAAACCATGTCAGGCAAATCGGAGTTAAAAATCAACTCTGGCTTCGCGCAAAAATATGAGAAATACCGACAAAAAGAGGAGCTACAGAGACTGAAGGACCGATACGGAGACCGAGCAGATGAGAGTGACTCCGAGTCGTCGGAGTCCAGCTCTGGTGACAGTGAAGTGGAACTAGACCCTGAAGTTGAGAGGGACTTTTACAGAACATTGTCTCTGCTGAAGAAGAAGGACCCCAAGATCTATGAGGCAGATGCAAAGTTCTACTCAGAAGATGCATCCACCAGTAATGAGAAGCCTTCAACGTCGAAGACAGCAGTGAAGCCCATGTATCTCAAGGACTATGAACGTATAGTCATACTGGAAAAGGAAGGCAAATATGAGGATGACGACGACAGTGATGACGAGGAGGCTGCCGCCAAGAGAATAGAGAGAGCTGCCTCTCCTAGCTACATTCAGGAGCAGCGGGAGCTCAAACAGAGCTTCCGTAAGTTCATCCAAGACAGCGACGATgatgacgacgacgacgacaaGGACAGTGGGCGAGAGGGACCATCCAAGCTGCTCATCAGGAGGATCAAAACACAGGAAGAGAAGGATAAAGAAGAGGCAGACTATGTGGACTGGCTGAAAGGCCAAGCTGACCTCGAGGGTCCGGAGGAGGTGAAGGACATGAAGTACTTGAGGGACTACTGGAATGACCCAGAGCTGGACGAGAGGGAGCGTTTCCTGAGAGACTACGTCCTCAACAAGGGCTACCTCGATGATGCCGACGGTGATGATGAACGGATCCCGACCTACGAAGAGGTGGTCCAGGATGATGTGGACGATTCTGAAGAGGAAGGGGAGACTTTCTTGGAGCGGCAGGCGGACTTTGAGAGAAGCTACAACTTCCGATTTGAAGAGCCCGACGCTCAGCGGGTCAAGACGTACCCCCGCAGCATCGCCACGTCCGTGCGCTCCAAAGACGACCGCAGGAAACGCAAAAGGGAGgaagtgaaagaaagaaaggataaGGAGAAAGAGCAGAAGCGGGAGCAGCTGAAGCAGCTGAAGAACCTGAAGCGCAACGAGATCATGGAGAAGCTAAAGAAGCTCCAGGAGCTGACCGGCAACGAGCAGCTCGCCTTCAGTCAGACTGACCTGGAGGGAGACTTCGATCCACAGCAACACGATCAGCTcatgcagAAGTTCTTTGGGAACGAATACtacggagaagaagaggaggggaaGCCTCAGTTTGATGATGATGAGCTTGACGAGCACTGGAACTGGGACACGTGGACCGGAGAGGAACGAGAGGAAGACGGCGATGAAGAGGAGCAGGAGTATGACGCCTCTGGGGCCCACTGTGAAGATGAAAACTTCATTATGGATGCGGACTACGACCCGAACCAGCACACCGCctccaagaagaagaagaaaaaggagcgcaagaagatgaagaaagagGATTTGCCACAGTCgggcaagaagaagaaaaagtctCACTTTGCAGAAGTCATCACCAAAAACAAGCCTGTGTTTGATCCACAGGAGAAGAGCTTTGAGCAGTACCTGGACGAGTACTACAAGCTGGACTACGAGGACATCATCGACGACCTGCCATGCCGGTTCCGCTACAGGCAGGTCCTCGCCAACGACTTCGGCCTGAGCACCGATGAGATTTTAAGTGCTAACGATACGGAGCTGAACCGCTGGTGCTCTCTGAAGAAGACGTGCATGTTCAGGTCTGACAAGGAAGAGACGAGTGATTTGAAGAACTATATCATCAAGGCTCAGaatgaaaagaggaaaaaggaaaTCCTGAGCTCCGTGTATTCTGAGGAAGACAAAGAGCTGGCCGAGGCTAAGACCAAGGTGGGGAAGAAGCGACGAGATCATCTGAAGGACGCTGAGAAGCGAGACGGAGCGACGGCTGAGGACGGCGCCTCAATCCTAGACTCTGCGGAAGAGACGGTAGTCCAAGCTCTCCGACAAGCGGGAGGCGAGGCAGAAGAAGCatcggaggaggaggaggaggaggaggagattcTGATACCCAAGAAAAAGATGAAACGGGAAGAGGAGCCCCAGACGGCGGTTTCTGCCGTGGCAGCGGCAGATAAAGCCGACGAGGTGGAAAACAGGACTGAGAGGCCAAAGTGGTCCAAGAAGAAGCACAAGCCCTCGGGCGGACGCCTCATATCGGGAACTGGCGGGGTGAGAATAGGCGGCCGGGAGTTCAGCAGACAGAGACTGAAGGCCTACGGTCTGAACCCCAAGAGACTGTTCTTCAGACAGCTCGGCAGACAGAAACGGAAGGCGcaggagaagaaagagaagcagaaaaacAAGGAGTGAGCCGCCACCTCTGAGATAACTGACCGTATCGTACAATCATTGATATTTAATGGTCTAAGAATTAAATGCTTTATTAAAGTTAGTTACTTTATGGCCtcaaagttcttttttttttttttttaaacttcaaggAATTGTTTAAATAGTGGCTACAAATTTAGAATTTGTACCTAATTGGTCATACTTACGGTTGAGTATATGGTTGGATTCTGGGTTTGACATTAACAGATTTCTCTTGCCTATATTCATTGTCTAGATTTCACATAACTATGTAATAAACATGCAATTGTATATGA

Function

symbol description
kri1 Acts upstream of or within definitive hemopoiesis and ribosome biogenesis. Predicted to be part of 90S preribosome. Predicted to be active in nucleolus. Is expressed in eye; immature eye; and somite. Orthologous to human KRI1 (KRI1 homolog).

NR:

description
PREDICTED: protein KRI1 homolog

GO: NA

KEGG:

id description
K14786 KRI1; protein KRI1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826330.1 True 2754 mRNA 0.50 18 3368814 3384569

Neighbor

gene id symbol gene type direction distance location
smarca4a smarca4 coding upstream 47428 3283608 ~ 3321386 (+)
LOC120574496 LOC100710752 coding upstream 112931 3164217 ~ 3255883 (+)
ubn2b NA coding upstream 381961 2957932 ~ 2986853 (+)
rpsa rpsa coding upstream 415304 2947411 ~ 2953510 (+)
LOC120574090 LOC101479176,LOC102292774,LOC102776828 coding upstream 427195 2931036 ~ 2941619 (+)
spc24 NA coding downstream 870 3385439 ~ 3395693 (+)
foxd7 LOC103364958,LOC101472204,LOC102208133,LOC100712378,LOC102300378 coding downstream 84896 3469465 ~ 3471015 (+)
hmox1a hmox1 coding downstream 181744 3566313 ~ 3574723 (+)
ntn1b LOC103359994,LOC102307962,LOC102192413 coding downstream 331995 3716564 ~ 3767061 (+)
usp43b usp43,LOC103359995,LOC100690273,LOC102787273,LOC102216249 coding downstream 430552 3815121 ~ 3952540 (+)
G151330 NA non-coding upstream 46414 3322195 ~ 3322400 (+)
G151318 NA non-coding upstream 107316 3214900 ~ 3261498 (+)
G151321 NA non-coding upstream 161349 3206499 ~ 3207465 (+)
G151312 NA non-coding upstream 223209 3145254 ~ 3145605 (+)
G151292 LOC103364965 non-coding upstream 227109 3122742 ~ 3141705 (+)
G151336 NA non-coding downstream 29632 3414201 ~ 3414537 (+)
G151411 NA non-coding downstream 45789 3430358 ~ 3430648 (+)
G151414 NA non-coding downstream 49526 3434095 ~ 3434380 (+)
G151430 NA non-coding downstream 150351 3534920 ~ 3537915 (+)
G151465 tom1 non-coding downstream 241095 3625664 ~ 3627549 (+)
ldlra ldlr other upstream 11619 3331004 ~ 3357195 (+)
LOC120573829 NA other upstream 91210 3243610 ~ 3277604 (+)
G151315 NA other upstream 220837 3146504 ~ 3147977 (+)
junbb LOC103364966,LOC107087652,LOC104932219,LOC100707881,LOC105929935 other upstream 264222 3083898 ~ 3104592 (+)
G151240 NA other upstream 365450 3001899 ~ 3003364 (+)
G151471 NA other downstream 274428 3658997 ~ 3663282 (+)
G151695 wbp11,LOC102783903 other downstream 933604 4318173 ~ 4319498 (+)
LOC120574173 NA other downstream 953512 4338081 ~ 4346405 (+)
pde6hb LOC104937730 other downstream 1015461 4400030 ~ 4469278 (+)
fmc1 fmc1,LOC102794917 other downstream 1378404 4762973 ~ 4765557 (+)

Expression


Co-expression Network