RNA id: XM_039826330.1


Basic Information

Item Value
RNA id XM_039826330.1
length 2754
RNA type mRNA
GC content 0.50
exon number 18
gene id kri1
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3368814 ~ 3384569 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGTAGTCCGTCCGGACTCCGGAAGCCACCTGGTTCAGCTTTCCACACGCGCATGCTGTAGTTGGAATGACTTCCCTTTAATAGCGTGTAGTTTTAACTATCTGTAATATCATTCTTTTAAACCATGTCAGGCAAATCGGAGTTAAAAATCAACTCTGGCTTCGCGCAAAAATATGAGAAATACCGACAAAAAGAGGAGCTACAGAGACTGAAGGACCGATACGGAGACCGAGCAGATGAGAGTGACTCCGAGTCGTCGGAGTCCAGCTCTGGTGACAGTGAAGTGGAACTAGACCCTGAAGTTGAGAGGGACTTTTACAGAACATTGTCTCTGCTGAAGAAGAAGGACCCCAAGATCTATGAGGCAGATGCAAAGTTCTACTCAGAAGATGCATCCACCAGTAATGAGAAGCCTTCAACGTCGAAGACAGCAGTGAAGCCCATGTATCTCAAGGACTATGAACGTATAGTCATACTGGAAAAGGAAGGCAAATATGAGGATGACGACGACAGTGATGACGAGGAGGCTGCCGCCAAGAGAATAGAGAGAGCTGCCTCTCCTAGCTACATTCAGGAGCAGCGGGAGCTCAAACAGAGCTTCCGTAAGTTCATCCAAGACAGCGACGATgatgacgacgacgacgacaaGGACAGTGGGCGAGAGGGACCATCCAAGCTGCTCATCAGGAGGATCAAAACACAGGAAGAGAAGGATAAAGAAGAGGCAGACTATGTGGACTGGCTGAAAGGCCAAGCTGACCTCGAGGGTCCGGAGGAGGTGAAGGACATGAAGTACTTGAGGGACTACTGGAATGACCCAGAGCTGGACGAGAGGGAGCGTTTCCTGAGAGACTACGTCCTCAACAAGGGCTACCTCGATGATGCCGACGGTGATGATGAACGGATCCCGACCTACGAAGAGGTGGTCCAGGATGATGTGGACGATTCTGAAGAGGAAGGGGAGACTTTCTTGGAGCGGCAGGCGGACTTTGAGAGAAGCTACAACTTCCGATTTGAAGAGCCCGACGCTCAGCGGGTCAAGACGTACCCCCGCAGCATCGCCACGTCCGTGCGCTCCAAAGACGACCGCAGGAAACGCAAAAGGGAGgaagtgaaagaaagaaaggataaGGAGAAAGAGCAGAAGCGGGAGCAGCTGAAGCAGCTGAAGAACCTGAAGCGCAACGAGATCATGGAGAAGCTAAAGAAGCTCCAGGAGCTGACCGGCAACGAGCAGCTCGCCTTCAGTCAGACTGACCTGGAGGGAGACTTCGATCCACAGCAACACGATCAGCTcatgcagAAGTTCTTTGGGAACGAATACtacggagaagaagaggaggggaaGCCTCAGTTTGATGATGATGAGCTTGACGAGCACTGGAACTGGGACACGTGGACCGGAGAGGAACGAGAGGAAGACGGCGATGAAGAGGAGCAGGAGTATGACGCCTCTGGGGCCCACTGTGAAGATGAAAACTTCATTATGGATGCGGACTACGACCCGAACCAGCACACCGCctccaagaagaagaagaaaaaggagcgcaagaagatgaagaaagagGATTTGCCACAGTCgggcaagaagaagaaaaagtctCACTTTGCAGAAGTCATCACCAAAAACAAGCCTGTGTTTGATCCACAGGAGAAGAGCTTTGAGCAGTACCTGGACGAGTACTACAAGCTGGACTACGAGGACATCATCGACGACCTGCCATGCCGGTTCCGCTACAGGCAGGTCCTCGCCAACGACTTCGGCCTGAGCACCGATGAGATTTTAAGTGCTAACGATACGGAGCTGAACCGCTGGTGCTCTCTGAAGAAGACGTGCATGTTCAGGTCTGACAAGGAAGAGACGAGTGATTTGAAGAACTATATCATCAAGGCTCAGaatgaaaagaggaaaaaggaaaTCCTGAGCTCCGTGTATTCTGAGGAAGACAAAGAGCTGGCCGAGGCTAAGACCAAGGTGGGGAAGAAGCGACGAGATCATCTGAAGGACGCTGAGAAGCGAGACGGAGCGACGGCTGAGGACGGCGCCTCAATCCTAGACTCTGCGGAAGAGACGGTAGTCCAAGCTCTCCGACAAGCGGGAGGCGAGGCAGAAGAAGCatcggaggaggaggaggaggaggaggagattcTGATACCCAAGAAAAAGATGAAACGGGAAGAGGAGCCCCAGACGGCGGTTTCTGCCGTGGCAGCGGCAGATAAAGCCGACGAGGTGGAAAACAGGACTGAGAGGCCAAAGTGGTCCAAGAAGAAGCACAAGCCCTCGGGCGGACGCCTCATATCGGGAACTGGCGGGGTGAGAATAGGCGGCCGGGAGTTCAGCAGACAGAGACTGAAGGCCTACGGTCTGAACCCCAAGAGACTGTTCTTCAGACAGCTCGGCAGACAGAAACGGAAGGCGcaggagaagaaagagaagcagaaaaacAAGGAGTGAGCCGCCACCTCTGAGATAACTGACCGTATCGTACAATCATTGATATTTAATGGTCTAAGAATTAAATGCTTTATTAAAGTTAGTTACTTTATGGCCtcaaagttcttttttttttttttttaaacttcaaggAATTGTTTAAATAGTGGCTACAAATTTAGAATTTGTACCTAATTGGTCATACTTACGGTTGAGTATATGGTTGGATTCTGGGTTTGACATTAACAGATTTCTCTTGCCTATATTCATTGTCTAGATTTCACATAACTATGTAATAAACATGCAATTGTATATGA

Function

GO: NA

KEGG:

id description
K14786 KRI1; protein KRI1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU205064 lncRNA upstream 11639 3351182 ~ 3357175 (+) False ldlra
TU205068 lncRNA upstream 46414 3322195 ~ 3322400 (+) True G151330
TU205061 lncRNA upstream 91210 3243610 ~ 3277604 (+) False LOC120573829
TU205035 lncRNA upstream 107316 3214900 ~ 3261498 (+) False G151318
TU205034 lncRNA upstream 107316 3255949 ~ 3261498 (+) True G151318
TU205076 lncRNA downstream 29632 3414201 ~ 3414537 (+) True G151336
TU205162 lncRNA downstream 45789 3430358 ~ 3430648 (+) True G151411
TU205165 lncRNA downstream 49526 3434095 ~ 3434380 (+) True G151414
TU205186 lncRNA downstream 150351 3534920 ~ 3537915 (+) True G151430
TU205232 lncRNA downstream 241095 3625664 ~ 3627549 (+) True G151465
XM_039826329.1 mRNA upstream 11619 3331004 ~ 3357195 (+) True ldlra
XM_039824718.1 mRNA upstream 47428 3283608 ~ 3321386 (+) True smarca4a
XM_039824715.1 mRNA upstream 47428 3289210 ~ 3321386 (+) False smarca4a
XM_039824716.1 mRNA upstream 47428 3289210 ~ 3321386 (+) False smarca4a
XM_039824717.1 mRNA upstream 47428 3289210 ~ 3321386 (+) False smarca4a
XM_039826332.1 mRNA downstream 870 3385439 ~ 3395693 (+) True spc24
XM_039823870.1 mRNA downstream 84896 3469465 ~ 3471015 (+) True foxd7
XM_039824415.1 mRNA downstream 181744 3566313 ~ 3574723 (+) True hmox1a
XM_039826094.1 mRNA downstream 331995 3716564 ~ 3767061 (+) True ntn1b
XM_039824519.1 mRNA downstream 430552 3815121 ~ 3952539 (+) False usp43b
TU205031 other upstream 220837 3146504 ~ 3147977 (+) True G151315
TU204936 other upstream 365450 3001899 ~ 3003364 (+) True G151240
TU204708 other upstream 566593 2799469 ~ 2802221 (+) True G151122
TU204669 other upstream 677252 2689720 ~ 2691562 (+) False LOC120574078
TU204682 other upstream 679776 2685103 ~ 2689038 (+) False LOC120574078
TU205238 other downstream 274428 3658997 ~ 3663282 (+) True G151471
TU205526 other downstream 933604 4318173 ~ 4319498 (+) True G151695
XR_005641832.1 other downstream 953525 4338094 ~ 4346405 (+) False LOC120574173
TU205564 other downstream 1015461 4400030 ~ 4403862 (+) True pde6hb
TU205565 other downstream 1015461 4400030 ~ 4455745 (+) False pde6hb

Expression Profile