aspdh (aspdh)


Basic Information

Item Value
gene id aspdh
gene name aspdh
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8863841 ~ 8866529 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823978.1
GGCCAGTTGTTGTGCTTCACATTGGGAgaaacgcagctctgcagaggTGTGGGATTATCTGGACATGGCAACCAGCGCTTCCTTCCAAAAGATTGGAGTTGTAGGTTACGGACATCTAGGGCAGTACCTGGTGGAGAGGATCCTTAAAGATGGAGCTGCTCTCGGTCTAACACTGGCTTTCGTTTGGAACAGAAATTTTGACAAGCTCAAAGGTTTAGTTCCTGATGAACTCATACTTGGTGACCTATCATCCTTTGCAGAAAGGCGATGTGATGTGATTGTAGAAGTGTGCCATCCGCAGATAGTGAAAGAATTTGGGCTTCACTTCCTGTCTAAGTCTCACTTAATGGTGGGTTCTCCCTCTGCCCTCTCAGACCCTGCTCTGAATCAGAAGCTGCGTCAGGTGGCTCAGCAGTATGGTAGGACACTCTACGTCCCCAGTGGTGCATTATGGGGAGGCCAGGACATCCAGAGGCTAAATGATAGTGGAGCCTTGAAGGCTTTATTTATAAGAATGTCCAAGCATCCATCCTGCTTCCGTCTGACAGGAGACGTCCTCTCTGATTGGACGGAGGAAGAGGGCAGGCGTGTTTTATTCAGAGGCTCAGTGGCAGAGTTGTGCCCACTTGCTCCAAACAATGTTAACAccatggcagcagcagcagtggcagcaggaACACTCGGCTTTACGGGTGTTCAGGGAGAGATTGTGTCTGACACAGCGTTAAGTGAGTATCatgtggtggaggtggaggtgacTGGGCCCGGTGGCTTCTCAGTACACACAGTAAGGAGGAATCCAGCCAAACTCGGAGCAGTAACCGGCAGTGCAACATACAACTCCTTCTGGAATAGTTTACTAGtttgcaAAGGTCATGGTGGCCGAGTTTACTTGTGCTGAAGCAGACGAGAACTCTGCAGGATTACCTACAACACAGCAAAACAAGCCAGATAAATCAGATGGTTTATAGTGGGTGTGTTGTGTGGATGGTGTCACTGGATCAGTATGTTACAAAGAACTTGAAAACCCACAGACCTTGGATATTTGTGTTCCAATAAACTGCATGCATACAAagaa
>XM_039823979.1
TTGTTGTGCTTCACATTGGGAgaaacgcagctctgcagaggTGTGGGATTATCTGCACAGGACATGGCAACCAGCGCTTCCTTCCAAAAGATTGGAGTTGTAGGTTACGGACATCTAGGGCAGTACCTGGTGGAGAGGATCCTTAAAGATGGAGCTGCTCTCGGTCTAACACTGGCTTTCGTTTGGAACAGAAATTTTGACAAGCTCAAAGGTTTAGTTCCTGATGAACTCATACTTGGTGACCTATCATCCTTTGCAGAAAGGCGATGTGATGTGATTGTAGAAGTGTGCCATCCGCAGATAGTGAAAGAATTTGGGCTTCACTTCCTGTCTAAGTCTCACTTAATGGTGGGTTCTCCCTCTGCCCTCTCAGACCCTGCTCTGAATCAGAAGCTGCGTCAGGTGGCTCAGCAGTATGGTAGGACACTCTACGTCCCCAGTGGTGCATTATGGGGAGGCCAGGACATCCAGAGGCTAAATGATAGTGGAGCCTTGAAGGCTTTATTTATAAGAATGTCCAAGCATCCATCCTGCTTCCGTCTGACAGGAGACGTCCTCTCTGATTGGACGGAGGAAGAGGGCAGGCGTGTTTTATTCAGAGGCTCAGTGGCAGAGTTGTGCCCACTTGCTCCAAACAATGTTAACAccatggcagcagcagcagtggcagcaggaACACTCGGCTTTACGGGTGTTCAGGGAGAGATTGTGTCTGACACAGCGTTAAGTGAGTATCatgtggtggaggtggaggtgacTGGGCCCGGTGGCTTCTCAGTACACACAGTAAGGAGGAATCCAGCCAAACTCGGAGCAGTAACCGGCAGTGCAACATACAACTCCTTCTGGAATAGTTTACTAGtttgcaAAGGTCATGGTGGCCGAGTTTACTTGTGCTGAAGCAGACGAGAACTCTGCAGGATTACCTACAACACAGCAAAACAAGCCAGATAAATCAGATGGTTTATAGTGGGTGTGTTGTGTGGATGGTGTCACTGGATCAGTATGTTACAAAGAACTTGAAAACCCACAGACCTTGGATATTTGTGTTCCAATAAACTGCATGCATACAAagaa

Function

symbol description
aspdh Predicted to enable NADP binding activity and aspartate dehydrogenase activity. Predicted to act upstream of or within NAD biosynthetic process. Orthologous to human ASPDH (aspartate dehydrogenase domain containing).

NR:

description
PREDICTED: putative L-aspartate dehydrogenase

GO:

id name namespace
GO:0006742 NADP catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0009435 NAD biosynthetic process biological_process
GO:0050661 NADP binding molecular_function
GO:0033735 aspartate dehydrogenase activity molecular_function

KEGG:

id description
K06989 nadX, ASPDH; aspartate dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823978.1 True 1078 mRNA 0.49 8 8863841 8866529
XM_039823979.1 False 1077 mRNA 0.48 8 8863847 8866529

Neighbor

gene id symbol gene type direction distance location
hspbp1 hspbp1,LOC102791397 coding upstream 3342 8856478 ~ 8860499 (+)
kcnj12b LOC103375016,LOC104930358,LOC104942720 coding upstream 17964 8839379 ~ 8845877 (+)
LOC120574270 NA coding upstream 29731 8817737 ~ 8834110 (+)
cramp1 cramp1 coding upstream 68840 8779616 ~ 8795001 (+)
nme3 nme3 coding upstream 124265 8733708 ~ 8739576 (+)
pold1 pold1 coding downstream 9727 8876256 ~ 8894908 (+)
LOC120574330 NA coding downstream 194787 9061316 ~ 9067135 (+)
LOC120574580 NA coding downstream 215318 9081847 ~ 9086215 (+)
LOC120574615 NA coding downstream 234656 9101185 ~ 9101623 (+)
LOC120574625 LOC102776372 coding downstream 236068 9102597 ~ 9103168 (+)
G153026 tmem11 non-coding upstream 53809 8806854 ~ 8810032 (+)
G153022 NA non-coding upstream 61180 8796506 ~ 8802661 (+)
G153005 NA non-coding upstream 159650 8703916 ~ 8704191 (+)
G152991 NA non-coding upstream 211003 8651618 ~ 8652838 (+)
G152990 NA non-coding upstream 216419 8646923 ~ 8647422 (+)
G153049 NA non-coding downstream 29110 8895639 ~ 8903846 (+)
G153058 LOC104930346,LOC102232733,LOC102793338,LOC101069507,LOC103469087 non-coding downstream 58058 8924587 ~ 8938805 (+)
G153067 NA non-coding downstream 90510 8957039 ~ 9021495 (+)
G153084 NA non-coding downstream 138299 9004828 ~ 9008768 (+)
G153088 kctd13,LOC106600645,LOC101075733 non-coding downstream 144709 9011238 ~ 9014247 (+)
G153016 NA other upstream 101259 8757246 ~ 8762582 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other upstream 162070 8696899 ~ 8701771 (+)
mapk3 mapk3,LOC104942729 other upstream 179076 8666470 ~ 8684765 (+)
mcrip1 mcrip1 other upstream 414536 8445420 ~ 8449305 (+)
G152892 NA other upstream 735860 8127265 ~ 8127981 (+)
eps8l1a eps8l1 other downstream 92719 8959248 ~ 8969045 (+)
asphd1 asphd1,LOC103374850,LOC102795844,LOC102314131 other downstream 170372 9036901 ~ 9042045 (+)
G153245 NA other downstream 207342 9073871 ~ 9116603 (+)
LOC120574336 NA other downstream 256077 9122606 ~ 9123105 (+)
LOC120574342 LOC102776372 other downstream 257048 9123577 ~ 9173311 (+)

Expression


Co-expression Network