hspbp1 (hspbp1,LOC102791397)


Basic Information

Item Value
gene id hspbp1
gene name hspbp1,LOC102791397
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8856478 ~ 8860499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825138.1
GCCAATTTGGTTCAAGGTTTACGGTACAGCATGGCAGCCTCCTTGCCACTCGTGAGatcagctaacgttacgttagcTAGAATGTTCTTCTAGCGCATTCATGTATCTGTGTTTAAAGGGAAGTTAACTTGTTTTAAAAAGACGCAGTGTGTCTATTTTTTCCAACGCAGCTTCATAGGACTCGTGTACAGCGGCGCACATCATGGCAGAAGACAGACCAACTAGGAGATATCCCCAGAACCTCCAGGGGGTCCTGCAGCTAGCAGTGGATGTTGGTTCAGCCGCAGAGGGACCTGCCACTGTTGAACCCATGTCAGAGGAGAGGAAGACATGGCTGGGAGATGCTCTTGCAGAAGTCTGTAAAGGCCCGATGGATGAAGTGGAGCAGATAAAGCACTGCTTGGCCGTCTTACGcaaagagggaaggagagaaagggagagagaaggagaggaggaaagggaTGAAGAGGATGAAGATGAGCGGGAATCCGCCTTTGAATTGCTGTCCGAGTTGTGTGAGAACCTGGACAATGCTAGAGACCTAATGACTCTTGGTGGACTGGAATTGTGCCTCTCTCAGTATCTGTGTCATGCCCAAAGTGGACTGAGGTGGCGTGCTGCCCATCTTATCGCTACCTGTGCCCAGAACATGTCGCAGGTGCAGGTCCACTTGTTTAGCATCGGGGCACTGCCAAAACTGCTGCAGCTGACAGACTCGGACCCCCACCCCACCGTCAGAGTGAAAGCCCTTTATGCTGTGTCGTGTCTGGTTCGAGAGCAGGAGGCAGGACTCCAGGCATTCTTGTCCCATGATGGCTTCTCAATGCTGATGCGAGGCATGCAGTCAGACAACGAGAAGCTCAGAACTAAGTCTGCATTCCTTCTGCTCAACCTGCTCATGTCACATCCTGAAACGAAAGACACCGTTGTCTCCATGGGTATGGTACAGCAGCTGGTATCTGTTCTTCGCACACCACACTCAGATTTCCATGAACATGTGCTTGGCGCCCTTTGCTGTCTGGTGGAAGACTGTCCACAGGGACTCAAAGACTGCAGGAATCCTGCTTTGGGTCTGGAGGAGTTACTCAGACAGCTATCCAAAGAGCTccaaggaaaagaagaaagccagGAAGAACTGGACTTCTGTGAGCGTTTGAGGGTTACTTGTTTCCGCGGGCAGCAGTCGGATGACAATGGGATGGATCGCTGAAGTCTTATTTACCTCACCTGTGTTGGTATCAGTGTGCAAAGATGTTAACAGAACATTTATGATCTGGATCGTAGATGTTAAGCAACGTTTTTGTCTGTTAGGACAGATGCTGTccataatttgcatgcaatgcAGGAGCTGGATTGTACTGTGTAAATAGCTCTAATGTATAAAAGTACTTCTCAAGTCAGCTGCTA
>XM_039825139.1
TTTACTGATACTCTCTGAACGCCGTGCGTACAAACGTCACTGATTTACCTTAAACACGCTAATAGGTGGAGTTTGCATAGAAAAAGGTAGTTTGCTGTTGTGCCTTTTAAATGCCAAGCGGCGCACATCATGGCAGAAGACAGACCAACTAGGAGATATCCCCAGAACCTCCAGGGGGTCCTGCAGCTAGCAGTGGATGTTGGTTCAGCCGCAGAGGGACCTGCCACTGTTGAACCCATGTCAGAGGAGAGGAAGACATGGCTGGGAGATGCTCTTGCAGAAGTCTGTAAAGGCCCGATGGATGAAGTGGAGCAGATAAAGCACTGCTTGGCCGTCTTACGcaaagagggaaggagagaaagggagagagaaggagaggaggaaagggaTGAAGAGGATGAAGATGAGCGGGAATCCGCCTTTGAATTGCTGTCCGAGTTGTGTGAGAACCTGGACAATGCTAGAGACCTAATGACTCTTGGTGGACTGGAATTGTGCCTCTCTCAGTATCTGTGTCATGCCCAAAGTGGACTGAGGTGGCGTGCTGCCCATCTTATCGCTACCTGTGCCCAGAACATGTCGCAGGTGCAGGTCCACTTGTTTAGCATCGGGGCACTGCCAAAACTGCTGCAGCTGACAGACTCGGACCCCCACCCCACCGTCAGAGTGAAAGCCCTTTATGCTGTGTCGTGTCTGGTTCGAGAGCAGGAGGCAGGACTCCAGGCATTCTTGTCCCATGATGGCTTCTCAATGCTGATGCGAGGCATGCAGTCAGACAACGAGAAGCTCAGAACTAAGTCTGCATTCCTTCTGCTCAACCTGCTCATGTCACATCCTGAAACGAAAGACACCGTTGTCTCCATGGGTATGGTACAGCAGCTGGTATCTGTTCTTCGCACACCACACTCAGATTTCCATGAACATGTGCTTGGCGCCCTTTGCTGTCTGGTGGAAGACTGTCCACAGGGACTCAAAGACTGCAGGAATCCTGCTTTGGGTCTGGAGGAGTTACTCAGACAGCTATCCAAAGAGCTccaaggaaaagaagaaagccagGAAGAACTGGACTTCTGTGAGCGTTTGAGGGTTACTTGTTTCCGCGGGCAGCAGTCGGATGACAATGGGATGGATCGCTGAAGTCTTATTTACCTCACCTGTGTTGGTATCAGTGTGCAAAGATGTTAACAGAACATTTATGATCTGGATCGTAGATGTTAAGCAACGTTTTTGTCTGTTAGGACAGATGCTGTccataatttgcatgcaatgcAGGAGCTGGATTGTACTGTGTAAATAGCTCTAATGTATAAAAGTACTTCTCAAGTCAGCTGCTA
>XM_039825140.1
TAGGTGGAGTTTGCATAGAAAAAGCGGCGCACATCATGGCAGAAGACAGACCAACTAGGAGATATCCCCAGAACCTCCAGGGGGTCCTGCAGCTAGCAGTGGATGTTGGTTCAGCCGCAGAGGGACCTGCCACTGTTGAACCCATGTCAGAGGAGAGGAAGACATGGCTGGGAGATGCTCTTGCAGAAGTCTGTAAAGGCCCGATGGATGAAGTGGAGCAGATAAAGCACTGCTTGGCCGTCTTACGcaaagagggaaggagagaaagggagagagaaggagaggaggaaagggaTGAAGAGGATGAAGATGAGCGGGAATCCGCCTTTGAATTGCTGTCCGAGTTGTGTGAGAACCTGGACAATGCTAGAGACCTAATGACTCTTGGTGGACTGGAATTGTGCCTCTCTCAGTATCTGTGTCATGCCCAAAGTGGACTGAGGTGGCGTGCTGCCCATCTTATCGCTACCTGTGCCCAGAACATGTCGCAGGTGCAGGTCCACTTGTTTAGCATCGGGGCACTGCCAAAACTGCTGCAGCTGACAGACTCGGACCCCCACCCCACCGTCAGAGTGAAAGCCCTTTATGCTGTGTCGTGTCTGGTTCGAGAGCAGGAGGCAGGACTCCAGGCATTCTTGTCCCATGATGGCTTCTCAATGCTGATGCGAGGCATGCAGTCAGACAACGAGAAGCTCAGAACTAAGTCTGCATTCCTTCTGCTCAACCTGCTCATGTCACATCCTGAAACGAAAGACACCGTTGTCTCCATGGGTATGGTACAGCAGCTGGTATCTGTTCTTCGCACACCACACTCAGATTTCCATGAACATGTGCTTGGCGCCCTTTGCTGTCTGGTGGAAGACTGTCCACAGGGACTCAAAGACTGCAGGAATCCTGCTTTGGGTCTGGAGGAGTTACTCAGACAGCTATCCAAAGAGCTccaaggaaaagaagaaagccagGAAGAACTGGACTTCTGTGAGCGTTTGAGGGTTACTTGTTTCCGCGGGCAGCAGTCGGATGACAATGGGATGGATCGCTGAAGTCTTATTTACCTCACCTGTGTTGGTATCAGTGTGCAAAGATGTTAACAGAACATTTATGATCTGGATCGTAGATGTTAAGCAACGTTTTTGTCTGTTAGGACAGATGCTGTccataatttgcatgcaatgcAGGAGCTGGATTGTACTGTGTAAATAGCTCTAATGTATAAAAGTACTTCTCAAGTCAGCTGCTA

Function

symbol description
hspbp1 Predicted to enable adenyl-nucleotide exchange factor activity. Predicted to be active in endoplasmic reticulum. Is expressed in optic tectum and solid lens vesicle. Orthologous to human HSPBP1 (HSPA (Hsp70) binding protein 1).

NR:

description
PREDICTED: hsp70-binding protein 1

GO: NA

KEGG:

id description
K09562 HSPBP1, FES1; hsp70-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825138.1 True 1407 mRNA 0.50 8 8856713 8860499
XM_039825139.1 False 1334 mRNA 0.50 8 8856478 8860499
XM_039825140.1 False 1240 mRNA 0.50 8 8856540 8860499

Neighbor

gene id symbol gene type direction distance location
kcnj12b LOC103375016,LOC104930358,LOC104942720 coding upstream 10601 8839379 ~ 8845877 (+)
LOC120574270 NA coding upstream 22368 8817737 ~ 8834110 (+)
cramp1 cramp1 coding upstream 61477 8779616 ~ 8795001 (+)
nme3 nme3 coding upstream 116902 8733708 ~ 8739576 (+)
mrps34 mrps34,LOC102799846 coding upstream 123464 8730966 ~ 8733014 (+)
aspdh aspdh coding downstream 3342 8863841 ~ 8866529 (+)
pold1 pold1 coding downstream 15757 8876256 ~ 8894908 (+)
LOC120574330 NA coding downstream 200817 9061316 ~ 9067135 (+)
LOC120574580 NA coding downstream 221348 9081847 ~ 9086215 (+)
LOC120574615 NA coding downstream 240686 9101185 ~ 9101623 (+)
G153026 tmem11 non-coding upstream 46446 8806854 ~ 8810032 (+)
G153022 NA non-coding upstream 53817 8796506 ~ 8802661 (+)
G153005 NA non-coding upstream 152287 8703916 ~ 8704191 (+)
G152991 NA non-coding upstream 203640 8651618 ~ 8652838 (+)
G152990 NA non-coding upstream 209056 8646923 ~ 8647422 (+)
G153049 NA non-coding downstream 35140 8895639 ~ 8903846 (+)
G153058 LOC104930346,LOC102232733,LOC102793338,LOC101069507,LOC103469087 non-coding downstream 64088 8924587 ~ 8938805 (+)
G153067 NA non-coding downstream 96540 8957039 ~ 9021495 (+)
G153084 NA non-coding downstream 144329 9004828 ~ 9008768 (+)
G153088 kctd13,LOC106600645,LOC101075733 non-coding downstream 150739 9011238 ~ 9014247 (+)
G153016 NA other upstream 93896 8757246 ~ 8762582 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other upstream 154707 8696899 ~ 8701771 (+)
mapk3 mapk3,LOC104942729 other upstream 171713 8666470 ~ 8684765 (+)
mcrip1 mcrip1 other upstream 407173 8445420 ~ 8449305 (+)
G152892 NA other upstream 728497 8127265 ~ 8127981 (+)
eps8l1a eps8l1 other downstream 98749 8959248 ~ 8969045 (+)
asphd1 asphd1,LOC103374850,LOC102795844,LOC102314131 other downstream 176402 9036901 ~ 9042045 (+)
G153245 NA other downstream 213372 9073871 ~ 9116603 (+)
LOC120574336 NA other downstream 262107 9122606 ~ 9123105 (+)
LOC120574342 LOC102776372 other downstream 263078 9123577 ~ 9173311 (+)

Expression


Co-expression Network