mcrip1 (mcrip1)


Basic Information

Item Value
gene id mcrip1
gene name mcrip1
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8445420 ~ 8449305 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207168
GATTGGTTGGCATTGGCAACGTTTTAGCCAGGTCTAACGGCGTACGAGTCTCTGAATAAAGAAACCGAAAGGAAGGGTTATAAAAAGAATTCAGCTGAGGACTTCTGAACCTTTTTTATTCTTCAAATCCACTCACCATAGAGGAGCGAGGAGCGAGTACAGACTGCAAACAGAATGACCAGCTCATCTGCTCCCAGGATGGTGAATAGTTACAAGCGGACTTCAAGCCCCCGATCCCCTACTAACAGTGGGGAGCTTTTCACCCCAGCACATGAGGAAAATGTGCGCTTTATACATGATACCTGGCAATGTGTGCTCCGAGACATCAGATCAACACAAAATAGTGAACGTAATGACCGTGGACCACAAGAGTATGTGGAGAAGAACCCAAATCCTAACCTACATTCTTTCACACCAGTGGACCTGAGCGACCTTAAGAAGCGCAACACACAGGACTCCAAGAAGTCCTAGTCTTTCTTACGATGGTCAAGTCGTTTCTTTCCACCCATTATCCTCGAGAACTTTTCCTCCATCAGCCAGAAAGTCAGCCCTGTTGGCCAGTCTATAGCACAGAATGCCAATCTCATTTCTCAACTCTGGACCATAGCAACCCCCGTCTCTTTCGTTACCCTCTTCAACTGACTACGAAGAAAAGAACCAGGATACCGGGACAAATTCTCTGGTCTCTtggttcatgtttttttaagtcACAAAATCTTCATATGTACATTATGTGGATGGGACTGATGCAAACTTTCACCAACATTTGCTGACATCTGATGCTGAGGTACAAACTGTCGACACTCTCCACAGGACACAAAAGACTTCAGTCTTAAATACAAACCTTGTTTTCTTTACTACTGCTACTTATATGACTTTGGGGGGAAATGCGAAAGGACTGacttctatttttatttttttttggaagatAGTTTGATCGGTAAATTGTAGAAGTAATGGAATGGTCACATTGGATATACATTTTACTTTATGGGCAAGTTTTGGAAGCCAAATGCAATGTAGAAGGCCaacatttttattataaattttcTTGCCCTCAAATGGACTTTACTAAGTAGAGACCTCCCAGAGTATGCTGCCCTTGGTTAACCCTCCCTCCCCTAAGCCttgaaacaaaatgttgaataaaAGACTT
>TU207169
GATTGGTTGGCATTGGCAACGTTTTAGCCAGGTCTAACGGCGTACGAGTCTCTGAATAAAGAAACCGAAAGGAAGGGTTATAAAAAGAGGAGCGAGGAGCGAGTACAGACTGCAAACAGAATGACCAGCTCATCTGCTCCCAGGATGGTGAATAGTTACAAGCGGACTTCAAGCCCCCGATCCCCTACTAACAGTGGGGAGCTTTTCACCCCAGCACATGAGGAAAATGTGCGCTTTATACATGATACCTGGCAATGTGTGCTCCGAGACATCAGATCAACACAAAATAGTGAACGTAATGACCGTGGACCACAAGAGTATGTGGAGAAGAACCCAAATCCTAACCTACATTCTTTCACACCAGTGGACCTGAGCGACCTTAAGAAGCGCAACACACAGGACTCCAAGAAGTCCTAGTCTTTCTTACGATGGTCAAGTCGTTTCTTTCCACCCATTATCCTCGAGAACTTTTCCTCCATCAGCCAGAAAGTCAGCCCTGTTGGCCAGTCTATAGCACAGAATGCCAATCTCATTTCTCAACTCTGGACCATAGCAACCCCCGTCTCTTTCGTTACCCTCTTCAACTGACTACGAAGAAAAGAACCAGGATACCGGGACAAATTCTCTGGTCTCTtggttcatgtttttttaagtcACAAAATCTTCATATGTACATTATGTGGATGGGACTGATGCAAACTTTCACCAACATTTGCTGACATCTGATGCTGAGGTACAAACTGTCGACACTCTCCACAGGACACAAAAGACTTCAGTCTTAAATACAAACCTTGTTTTCTTTACTACTGCTACTTATATGACTTTGGGGGGAAATGCGAAAGGACTGacttctatttttatttttttttggaagatAGTTTGATCGGTAAATTGTAGAAGTAATGGAATGGTCACATTGGATATACATTTTACTTTATGGGCAAGTTTTGGAAGCCAAATGCAATGTAGAAGGCCaacatttttattataaattttcTTGCCCTCAAATGGACTTTACTAAGTAGAGACCTCCCAGAGTATGCTGCCCTTGGTTAACCCTCCCTCCCCTAAGCCttgaaacaaaatgttgaataaaAGACTT
>XM_039826255.1
GTCTTTTCCAAGCTTTTCCCGGAAATGATTGGTTGGCATTGGCAACGTTTTAGCCAGGTCTAACGGCGTACGAGTCTCTGAATAAAGAAACCGAAAGGAAGGGTTATAAAAAGAATTCAGCTGAGGACTTCTGAACCTTTTTTATTCTTCAAATCCACTCACCATAGAGGAGCGAGGAGCGAGTACAGACTGCAAACAGAATGACCAGCTCATCTGCTCCCAGGATGGTGAATAGTTACAAGCGGACTTCAAGCCCCCGATCCCCTACTAACAGTGGGGAGCTTTTCACCCCAGCACATGAGGAAAATGTGCGCTTTATACATGATACCTGGCAATGTGTGCTCCGAGACATCAGATCAACACAAAATAGTGAACGTAATGACCGTGGACCACAAGAGTATGTGGAGAAGAACCCAAATCCTAACCTACATTCTTTCACACCAGTGGACCTGAGCGACCTTAAGAAGCGCAACACACAGGACTCCAAGAAGTCCTAGTCTTTCTTACGATGGTCAAGTCGTTTCTTTCCACCCATTATCCTCGAGAACTTTTCCTCCATCAGCCAGAAAGTCAGCCCTGTTGGCCAGTCTATAGCACAGAATGCCAATCTCATTTCTCAACTCTGGACCATAGCAACCCCCGTCTCTTTCGTTACCCTCTTCAACTGACTACGAAGAAAAGAACCAGGATACCGGGACAAATTCTCTGGTCTCTtggttcatgtttttttaagtcACAAAATCTTCATATGTACATTATGTGGATGGGACTGATGCAAACTTTCACCAACATTTGCTGACATCTGATGCTGAGGTACAAACTGTCGACACTCTCCACAGGACACAAAAGACTTCAGTCTTAAATACAAACCTTGTTTTCTTTACTACTGCTACTTATATGACTTTGGGGGGAAATGCGAAAGGACTGacttctatttttatttttttttggaagatAGTTTGATCGGTAAATTGTAGAAGTAATGGAATGGTCACATTGGATATACATTTTACTTTATGGGCAAGTTTTGGAAGCCAAATGCAATGTAGAAGGCCaacatttttattataaattttcTTGCCCTCAAATGGACTTTACTAAGTAGAGACCTCCCAGAGTATGCTGCCCTTGGTTAACCCTCCCTCCCCTAAGCCttgaaacaaaatgttgaataaaAGACTTTTACAGTA
>XM_039826256.1
CAAGCTTTTCCCGGAAATGATTGGTTGGCATTGGCAACGTTTTAGCCAGGTCTAACGGCGTACGAGTCTCTGAATAAAGAAACCGAAAGGAAGGGTTATAAAAAGAGGAGCGAGGAGCGAGTACAGACTGCAAACAGAATGACCAGCTCATCTGCTCCCAGGATGGTGAATAGTTACAAGCGGACTTCAAGCCCCCGATCCCCTACTAACAGTGGGGAGCTTTTCACCCCAGCACATGAGGAAAATGTGCGCTTTATACATGATACCTGGCAATGTGTGCTCCGAGACATCAGATCAACACAAAATAGTGAACGTAATGACCGTGGACCACAAGAGTATGTGGAGAAGAACCCAAATCCTAACCTACATTCTTTCACACCAGTGGACCTGAGCGACCTTAAGAAGCGCAACACACAGGACTCCAAGAAGTCCTAGTCTTTCTTACGATGGTCAAGTCGTTTCTTTCCACCCATTATCCTCGAGAACTTTTCCTCCATCAGCCAGAAAGTCAGCCCTGTTGGCCAGTCTATAGCACAGAATGCCAATCTCATTTCTCAACTCTGGACCATAGCAACCCCCGTCTCTTTCGTTACCCTCTTCAACTGACTACGAAGAAAAGAACCAGGATACCGGGACAAATTCTCTGGTCTCTtggttcatgtttttttaagtcACAAAATCTTCATATGTACATTATGTGGATGGGACTGATGCAAACTTTCACCAACATTTGCTGACATCTGATGCTGAGGTACAAACTGTCGACACTCTCCACAGGACACAAAAGACTTCAGTCTTAAATACAAACCTTGTTTTCTTTACTACTGCTACTTATATGACTTTGGGGGGAAATGCGAAAGGACTGacttctatttttatttttttttggaagatAGTTTGATCGGTAAATTGTAGAAGTAATGGAATGGTCACATTGGATATACATTTTACTTTATGGGCAAGTTTTGGAAGCCAAATGCAATGTAGAAGGCCaacatttttattataaattttcTTGCCCTCAAATGGACTTTACTAAGTAGAGACCTCCCAGAGTATGCTGCCCTTGGTTAACCCTCCCTCCCCTAAGCCttgaaacaaaatgttgaataaaAGACTTTTACAGTA

Function

symbol description
mcrip1 Predicted to be involved in regulation of epithelial to mesenchymal transition. Predicted to be located in cytoplasmic stress granule and nucleus. Orthologous to human MCRIP1 (MAPK regulated corepressor interacting protein 1).

NR:

description
mapk-regulated corepressor-interacting protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207168 False 1156 TUCP 0.43 5 8445446 8449297
TU207169 False 1102 TUCP 0.43 5 8445446 8449297
XM_039826255.1 True 1190 mRNA 0.42 5 8445420 8449305
XM_039826256.1 False 1128 mRNA 0.43 5 8445428 8449305

Neighbor

gene id symbol gene type direction distance location
LOC120573853 LOC102215035,LOC103153318,LOC103469130,LOC106961933,LOC106906802 coding upstream 1041 8441188 ~ 8444379 (+)
pecam1 NA coding upstream 16591 8418841 ~ 8428829 (+)
LOC120574874 LOC108243002,LOC102310090,LOC106516502,LOC103375333 coding upstream 193113 8236142 ~ 8252307 (+)
LOC120575181 LOC100708112,LOC103375341,LOC102791385,LOC101480711,LOC102216199 coding upstream 235015 8149353 ~ 8210405 (+)
LOC120574676 LOC100700674,LOC104966931,LOC106533983,LOC101072238,LOC103375364 coding upstream 333363 8102205 ~ 8112057 (+)
alyref alyref coding downstream 663 8449968 ~ 8453079 (+)
arhgdia arhgdia,LOC107372410,LOC107087451,LOC103153321 coding downstream 5884 8455189 ~ 8472412 (+)
xylt2 xylt2 coding downstream 73824 8523129 ~ 8537979 (+)
LOC120575169 rab37,LOC106606976,LOC106601425,LOC105012908,LOC108242943 coding downstream 89285 8538590 ~ 8556285 (+)
LOC120574961 slc9a3r1,LOC103375212,LOC103393212,LOC102796138 coding downstream 108514 8557819 ~ 8588203 (+)
G152942 NA non-coding upstream 58677 8386516 ~ 8386743 (+)
G152916 NA non-coding upstream 190610 8253522 ~ 8254810 (+)
G152826 NA non-coding upstream 332806 8112386 ~ 8112614 (+)
G152823 NA non-coding upstream 353214 8088994 ~ 8092206 (+)
LOC120574886 NA non-coding upstream 371904 8071892 ~ 8073516 (+)
LOC120575098 NA non-coding downstream 47042 8496347 ~ 8501904 (+)
G152973 LOC104929519,LOC103375241,LOC102212394,LOC101477022,LOC104948534,LOC102794201,LOC102305637 non-coding downstream 57021 8506326 ~ 8511794 (+)
G152981 NA non-coding downstream 179403 8628708 ~ 8629645 (+)
G152990 NA non-coding downstream 197618 8646923 ~ 8647422 (+)
G152991 NA non-coding downstream 202313 8651618 ~ 8652838 (+)
G152892 NA other upstream 317439 8127265 ~ 8127981 (+)
emp2 emp2 other upstream 1088582 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 1170809 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 2488103 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 2673553 5725886 ~ 5771867 (+)
mapk3 mapk3,LOC104942729 other downstream 217165 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 247594 8696899 ~ 8701771 (+)
G153016 NA other downstream 307941 8757246 ~ 8762582 (+)
eps8l1a eps8l1 other downstream 509943 8959248 ~ 8969045 (+)
asphd1 asphd1,LOC103374850,LOC102795844,LOC102314131 other downstream 587596 9036901 ~ 9042045 (+)

Expression


Co-expression Network