G152973 (LOC104929519,LOC103375241,LOC102212394,LOC101477022,LOC104948534,LOC102794201,LOC102305637)


Basic Information

Item Value
gene id G152973
gene name LOC104929519,LOC103375241,LOC102212394,LOC101477022,LOC104948534,LOC102794201,LOC102305637
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8506326 ~ 8511794 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207193
GATTTGGTTTATTTATCATTCACAGAAATGCATTCTTACTGCAGGGTTAATATTGCACAATACACTACATTATTACTATAGGTTTCCTTTCAAATATATGAAAATACATTATGTGTGTGAGCAATGAGTAGCGCTGTAACTCTATAGTGAGGAAGTGGTTGCAACGATCACattaaagcagcagcagcagcagcagcatagaGGGTGGTCACATAGTGGAGCTATTCAATAGCACAATGATCAGGATCTCTGATTCCTTTCATATAACCATTTGGAATACATTATTATGATATCTACTGGCTTTTAAAggaagaggggagaggaggaagctCAACCCCAGAGGCAGGGAGTGGGGCAGAGACATTGGGTCTTAGCCGCTGGAGACTTGATCACCAGATCCTTGCCGATCTCCACTGTCCCAAACAAGGGGAAAAGCTTCTCACCGAAGCTCTCGTTGTAGGTGTAAATGTGGAAGTGTTTGTCCACGTCATAGAAGGACAGCTGGCCGCGGTCGTAGTCGAGGTAGATGCCCACCTTGCGGGGGATGAGGCCGGCCGGCAGGGCTGTGAATGGCACCGTCAGTGCCTTCAGCTCAGTGCCCCTCTCCAGCCGCAGGCTCAGGTAACCCGTGTCTGTGTTCAGGGACTTGAAGCCTTTCCTCAGGGCCGATTCTTTGGCCACGCCCAGCCTCCAGTCCCGCTCTCCCACGTCCACCTCCCAGTAGTGGCGGCCCGAGCTGAAGCCCTCAATCCCGACAGCACACCACCAGCCGTCGAAGCGTTGGTGGTAGTTGGGAACATCCTTCCGCTCAAAGCCACAGCGCATCCTCTTCTCGTCAGTGATGAGCAGATCAGGGTTGGCGGTGTCCAGATCCAGAGTGACCTCCACTGAAGCATCTGAGATCCAATCCCACACTGGTTGAGGAATGTAGGATATGGCACCAATCTTTTGAGTCCTCTGCTTCCACATGAGCCACTGCTGCGGAATGGTATCCTTATCTGGGCGCTGCACGATTAAAGTCCAAAAAACCAGCTCCATAGCCGTCAGCAGATTGGGCGCGCGCCCCCAGCGCCAGGCTGACTGCAGGTCCTCCAGAGCCTTTGCAACAGGTTCCCCAGGCCACACACTTTGCTCAGGCTGAGCTCTCAGGTCCTTGATCCAGTTGAGGATCACAGTTTTGGCCTGCAGCACGTCCTGCTCATTAATCATATCAGGCTGTTTGACCTCGTCCATCTCTGGCCAGCCATCTGTCTGCAAGGGCCTCTTCTTGCTCTCTAACATGGAGGCCCACTGTAGAATGAAGACCCTGCAGAGAGAGGCTGGCCAGATGTCATCAAGGTTCCAGATGTTCTCCAGGACTGCTGACCGCTG
>TU207194
GATTTGGTTTATTTATCATTCACAGAAATGCATTCTTACTGCAGGGTTAATATTGCACAATACACTACATTATTACTATAGGTTTCCTTTCAAATATATGAAAATACATTATGTGTGTGAGCAATGAGTAGCGCTGTAACTCTATAGTGAGGAAGTGGTTGCAACGATCACattaaagcagcagcagcagcagcagcatagaGGGTGGTCACATAGTGGAGCTATTCAATAGCACAATGATCAGGATCTCTGATTCCTTTCATATAACCATTTGGAATACATTATTATGATATCTACTGGCTTTTAAAggaagaggggagaggaggaagctCAACCCCAGAGGCAGGGAGTGGGGCAGAGACATTGGGTCTTAGCCGCTGGAGACTTGATCACCAGATCCTTGCCGATCTCCACTGTCCCAAACAAGGGGAAAAGCTTCTCACCGAAGCTCTCGTTGTAGGTGTAAATGTGGAAGTGTTTGTCCACGTCATAGAAGGACAGCTGGCCGCGGTCGTAGTCGAGGTAGATGCCCACCTTGCGGGGGATGAGGCCGGCCGGCAGGGCTGTGAATGGCACCGTCAGTGCCTTCAGCTCAGTGCCCCTCTCCAGCCGCAGGCTCAGGTAACCCGTGTCTGTGTTCAGGGACTTGAAGCCTTTCCTCAGGGCCGATTCTTTGGCCACGCCCAGCCTCCAGTCCCGCTCTCCCACGTCCACCTCCCAGTAGTGGCGGCCCGAGCTGAAGCCCTCAATCCCGACAGCACACCACCAGCCGTCGAAGCGTTGGTGGTAGTTGGGAACATCCTTCCGCTCAAAGCCACAGCGCATCCTCTTCTCGTCAGTGATGAGCAGATCAGGGTTGGCGGTGTCCAGATCCAGAGTGACCTCCACTGAAGCATCTGAGATCCAATCCCACACTGGTTGAGGAATGTAGGATATGGCACCAATCTTTTGAGTCCTCTGCTTCCACATGAGCCACTGCTGCGGAATGGTATCCTTATCTGGGCGCTGCACGATTAAAGTCCAAAAAACCAGCTCCATAGCCGTCAGCAGATTGGGCGCGCGCCCCCAGCGCCAGGCTGACTGCAGGTCCTCCAGAGCCTTTGCAACAGGTTCCCCAGGCCACACACTTTGCTCAGGCTGAGCTCTCAGGTCCTTGATCCAGTTGAGGATCACAGTTTTGGCCTGCAGCACGTCCTGCTCATTAATCATATCAGGCTGTTTGACCTCGTCCATCTCTGGCCAGCCATCTGTCTGCAAGGGCCTCTTCTTGCTCTCTAACATGGAGGCCCACTGTAGAATGAAGACCCTGCAGAGAGAGGCTGGCCAGATGTCATCAAGGTTCCAGATGTTCTCCAGGACTGCTGACCGCTGGCACACTCGGCTTAGATCTCGAGCCAGATCCACAATAAACAGCTGATCCTCATCCAAAGGCTCCCTCTTCTCATTCTTCGCTCTCTTATGCGATTCCTTTATCTTGGCGGTAAGGTTTTTGGCCGGCTCCACCATGAAGTGAAAACACTGCATCATCTTGGCTGGTCTGTAATAAGAATCCTTCGTCCTCTGGTAAATaagttttcttcttctcttgccTTAAGAGCGAGCAGCCGCCCGTGACTGGAGGAAGCGTTATAGGCTTTGTGCTGCAGTGTCTGACCTTGTT

Function

NR:

description
PREDICTED: butyrophilin subfamily 3 member A3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207193 False 1371 lncRNA 0.52 7 8506326 8509364
TU207194 True 1660 lncRNA 0.52 10 8506326 8511794

Neighbor

gene id symbol gene type direction distance location
arhgdia arhgdia,LOC107372410,LOC107087451,LOC103153321 coding upstream 33914 8455189 ~ 8472412 (+)
alyref alyref coding upstream 53247 8449968 ~ 8453079 (+)
LOC120573853 LOC102215035,LOC103153318,LOC103469130,LOC106961933,LOC106906802 coding upstream 61947 8441188 ~ 8444379 (+)
pecam1 NA coding upstream 77497 8418841 ~ 8428829 (+)
LOC120574874 LOC108243002,LOC102310090,LOC106516502,LOC103375333 coding upstream 254019 8236142 ~ 8252307 (+)
xylt2 xylt2 coding downstream 11335 8523129 ~ 8537979 (+)
LOC120575169 rab37,LOC106606976,LOC106601425,LOC105012908,LOC108242943 coding downstream 26796 8538590 ~ 8556285 (+)
LOC120574961 slc9a3r1,LOC103375212,LOC103393212,LOC102796138 coding downstream 46025 8557819 ~ 8588203 (+)
atp2a1 atp2a1,LOC102238060,LOC106906942,LOC106957433 coding downstream 89810 8601604 ~ 8626351 (+)
gdpd3a gdpd3,LOC104942728 coding downstream 174043 8685837 ~ 8694204 (+)
LOC120575098 NA non-coding upstream 4422 8496347 ~ 8501904 (+)
G152942 NA non-coding upstream 119583 8386516 ~ 8386743 (+)
G152916 NA non-coding upstream 251516 8253522 ~ 8254810 (+)
G152826 NA non-coding upstream 393712 8112386 ~ 8112614 (+)
G152823 NA non-coding upstream 414120 8088994 ~ 8092206 (+)
G152981 NA non-coding downstream 116914 8628708 ~ 8629645 (+)
G152990 NA non-coding downstream 135129 8646923 ~ 8647422 (+)
G152991 NA non-coding downstream 139824 8651618 ~ 8652838 (+)
G153005 NA non-coding downstream 192122 8703916 ~ 8704191 (+)
G153022 NA non-coding downstream 284712 8796506 ~ 8802661 (+)
mcrip1 mcrip1 other upstream 57021 8445420 ~ 8449305 (+)
G152892 NA other upstream 378345 8127265 ~ 8127981 (+)
emp2 emp2 other upstream 1149488 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 1231715 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 2549009 5950424 ~ 5957317 (+)
mapk3 mapk3,LOC104942729 other downstream 154676 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 185105 8696899 ~ 8701771 (+)
G153016 NA other downstream 245452 8757246 ~ 8762582 (+)
eps8l1a eps8l1 other downstream 447454 8959248 ~ 8969045 (+)
asphd1 asphd1,LOC103374850,LOC102795844,LOC102314131 other downstream 525107 9036901 ~ 9042045 (+)

Expression


Co-expression Network