G152990


Basic Information

Item Value
gene id G152990
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8646923 ~ 8647422 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207213
CTGAACTTACCTGTTttagcttttctattatttgccttttccccacttagataTTATGTTCACATTAccgatgattatttatctaaaatctaagtgtgaagatattttgttagagcaccaattgtcaaccctagaatatcgctgcaatatcgatatcgaggtatttggtcaagaatatcgtgatatctgattttctccatatcgcccagccctaacgaGCACCCACTTTTCATGACCTGGCTCAGGTGGTCATAACAAAGAGGGAGACAATaccatgttaaatgtttaaacaatacTTTACCAAATTGAAACAAATTAGACCAAATTAACTATATACAGAATGGGATATGGAAATCAGTAGCGACAGTGGTGTAGGGTGTGCATGAGTGATATAGGTGCGCGTGTGTTGGTGTTGTAAAGTGTAAACTCAGAAAAAAGCAAACCTAGGACAACCTAACCAAATATAACCAAACCTTGGTGTGCCTGTGAGTACAgccaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207213 True 500 lncRNA 0.38 1 8646923 8647422

Neighbor

gene id symbol gene type direction distance location
atp2a1 atp2a1,LOC102238060,LOC106906942,LOC106957433 coding upstream 20572 8601604 ~ 8626351 (+)
LOC120574961 slc9a3r1,LOC103375212,LOC103393212,LOC102796138 coding upstream 58720 8557819 ~ 8588203 (+)
LOC120575169 rab37,LOC106606976,LOC106601425,LOC105012908,LOC108242943 coding upstream 90638 8538590 ~ 8556285 (+)
xylt2 xylt2 coding upstream 108944 8523129 ~ 8537979 (+)
arhgdia arhgdia,LOC107372410,LOC107087451,LOC103153321 coding upstream 174511 8455189 ~ 8472412 (+)
gdpd3a gdpd3,LOC104942728 coding downstream 38415 8685837 ~ 8694204 (+)
LOC120574773 LOC101066234,LOC101079871,LOC107557552,LOC106676044,LOC106920718 coding downstream 57198 8704620 ~ 8710204 (+)
atp6v0ca LOC101062972,LOC107376678,LOC100705449,LOC104942726,LOC107101194 coding downstream 65393 8712815 ~ 8719543 (+)
spsb3a spsb3,LOC104929506 coding downstream 75592 8723014 ~ 8730362 (+)
mrps34 mrps34,LOC102799846 coding downstream 83544 8730966 ~ 8733014 (+)
G152981 NA non-coding upstream 17278 8628708 ~ 8629645 (+)
G152973 LOC104929519,LOC103375241,LOC102212394,LOC101477022,LOC104948534,LOC102794201,LOC102305637 non-coding upstream 135129 8506326 ~ 8511794 (+)
LOC120575098 NA non-coding upstream 145019 8496347 ~ 8501904 (+)
G152942 NA non-coding upstream 260180 8386516 ~ 8386743 (+)
G152916 NA non-coding upstream 392113 8253522 ~ 8254810 (+)
G152991 NA non-coding downstream 4196 8651618 ~ 8652838 (+)
G153005 NA non-coding downstream 56494 8703916 ~ 8704191 (+)
G153022 NA non-coding downstream 149084 8796506 ~ 8802661 (+)
G153026 tmem11 non-coding downstream 159432 8806854 ~ 8810032 (+)
G153049 NA non-coding downstream 248217 8895639 ~ 8903846 (+)
mcrip1 mcrip1 other upstream 197618 8445420 ~ 8449305 (+)
G152892 NA other upstream 518942 8127265 ~ 8127981 (+)
emp2 emp2 other upstream 1290085 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 1372312 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 2689606 5950424 ~ 5957317 (+)
mapk3 mapk3,LOC104942729 other downstream 19048 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 49477 8696899 ~ 8701771 (+)
G153016 NA other downstream 109824 8757246 ~ 8762582 (+)
eps8l1a eps8l1 other downstream 311826 8959248 ~ 8969045 (+)
asphd1 asphd1,LOC103374850,LOC102795844,LOC102314131 other downstream 389479 9036901 ~ 9042045 (+)

Expression


Co-expression Network