LOC120574773 (LOC101066234,LOC101079871,LOC107557552,LOC106676044,LOC106920718)


Basic Information

Item Value
gene id LOC120574773
gene name LOC101066234,LOC101079871,LOC107557552,LOC106676044,LOC106920718
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8704620 ~ 8710204 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825211.1
CGAGTATAAAACGCCTCGCTTAAGCCTGGATACAGCGTTTCAGCACTCCTAACAGCGCAGCGGTGCGGTAGAGTCAGTCTTTCTCCTTATTTCATCCCTCTATCTCAGCGAGAGGAAACATGCGTGAGTGTATCTCGGTGCACGTTGGCCAAGCCGGTGTACAGATTGGCAATGCCTGCTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCGGACGGACGGATGCTCGGGGACAAGACCCTCGGAGGAGGAGACGACTCCTTTACCACCTTCTTCAGTGAGACCGGTGCTGGGAAGCACAGCCCCAGGGCCATTTTTGTGGACCTGGAACCCACTGTCATTGATGAGGTGCGCACCGGGACTTACCGCCAGCTGTTCCACCCCGAGCAGCTGATCACCGGCAAAGAGGACGCTGCCAACAACTACGCCCGCGGACACTACACAATCGGCAAAGAGATCATCGACATGGTGCTGGACAGGATCCGAAAACTGGCGGACCAGTGCACCGGCCTTCAGGGCTTCCTGGTTTTCCACAGCTTCGGCGGTGGCACCGGCTCCGGTTTCACCTCCCTGCTGATGGAGCGTCTGTCTGTGGACTACGGCAAGAAGTCCAAGCTGGAGTTCTCGGTCTACCCAGCTCCCCAGGTGTCCACGGCCGTGGTGGAGCCGTACAACGCCATCCTGACCACCCACACCACGCTGGAGCACTCGGACTGTTCCTTCATGGTGGACAACGAGGCCATCTACGACATCTGCCGCAGGAACCTGGACATCGAGCGCCCGTCTTACACCAACCTGAACCGGCTCATCAGCCAGATCGTGTCCTCGGTCACCGCCTCCCTTCGTTTCGATGGTGCCCTCAACGTCGACCTGACAGAGTTCCAGACCAACTTGGTGCCGTATCCCCGTATCCACTTCCCCCTGGCCACCTACGCCCCGGTCATCTCGGCCGAGAAGGCTTACCACGAGCAGCTCTCGGTGTCTGAAATCACAAACGCCTGCTTCGAGCCGGCCAACCAGCTGGTGAAATGCGACCCTCGCCACGGCAAATACATGGCCTGCTGCCTCTTGTATCGCGGTGACGTGGTGCCCAAAGACGTGAACGCCGCCATCGCCACCATCAAGACAAAGCGCTCCATCCAGTTTGTGGACTGGTGCCCCACTGGTTTCAAGGTGGGCATCAACTACCAGCCGCCCACCGTGGTTCCCGGCGGGGACCTGGCCAAGGTGCAGCGGGCCGTGTGCATGCTGAGCAACACCACCGCCATCGCAGAGGCCTGGGCTCGCCTCGACCACAAGTTCGATCTGATGTACGCCAAGCGGGCCTTCGTCCACTGGTACGTGGGCGaggggatggaggagggagagtTCTCGGAGGCCAGAGAAGATATGGCGGCGCTGGAGAAGGATTACGAAGAGGTCGGAGCCGATAGTGTGGGAGAGGAGGATGACGGAGAGGAGTATTAAGCAGGCATCGGTTTATGGATGTCCAAATAAAGCTTTTGTACAATGCA

Function

NR:

description
PREDICTED: tubulin alpha chain

GO: NA

KEGG:

id description
K07374 TUBA; tubulin alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825211.1 True 1516 mRNA 0.59 4 8704620 8710204

Neighbor

gene id symbol gene type direction distance location
gdpd3a gdpd3,LOC104942728 coding upstream 10416 8685837 ~ 8694204 (+)
atp2a1 atp2a1,LOC102238060,LOC106906942,LOC106957433 coding upstream 78269 8601604 ~ 8626351 (+)
LOC120574961 slc9a3r1,LOC103375212,LOC103393212,LOC102796138 coding upstream 116417 8557819 ~ 8588203 (+)
LOC120575169 rab37,LOC106606976,LOC106601425,LOC105012908,LOC108242943 coding upstream 148335 8538590 ~ 8556285 (+)
xylt2 xylt2 coding upstream 166641 8523129 ~ 8537979 (+)
atp6v0ca LOC101062972,LOC107376678,LOC100705449,LOC104942726,LOC107101194 coding downstream 2611 8712815 ~ 8719543 (+)
spsb3a spsb3,LOC104929506 coding downstream 12810 8723014 ~ 8730362 (+)
mrps34 mrps34,LOC102799846 coding downstream 20762 8730966 ~ 8733014 (+)
nme3 nme3 coding downstream 23504 8733708 ~ 8739576 (+)
cramp1 cramp1 coding downstream 69412 8779616 ~ 8795001 (+)
G153005 NA non-coding upstream 429 8703916 ~ 8704191 (+)
G152991 NA non-coding upstream 51782 8651618 ~ 8652838 (+)
G152990 NA non-coding upstream 57198 8646923 ~ 8647422 (+)
G152981 NA non-coding upstream 74975 8628708 ~ 8629645 (+)
G152973 LOC104929519,LOC103375241,LOC102212394,LOC101477022,LOC104948534,LOC102794201,LOC102305637 non-coding upstream 192826 8506326 ~ 8511794 (+)
G153022 NA non-coding downstream 86302 8796506 ~ 8802661 (+)
G153026 tmem11 non-coding downstream 96650 8806854 ~ 8810032 (+)
G153049 NA non-coding downstream 185435 8895639 ~ 8903846 (+)
G153058 LOC104930346,LOC102232733,LOC102793338,LOC101069507,LOC103469087 non-coding downstream 214383 8924587 ~ 8938805 (+)
G153067 NA non-coding downstream 246835 8957039 ~ 9021495 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other upstream 2849 8696899 ~ 8701771 (+)
mapk3 mapk3,LOC104942729 other upstream 19855 8666470 ~ 8684765 (+)
mcrip1 mcrip1 other upstream 255315 8445420 ~ 8449305 (+)
G152892 NA other upstream 576639 8127265 ~ 8127981 (+)
emp2 emp2 other upstream 1347782 7339985 ~ 7356838 (+)
G153016 NA other downstream 47042 8757246 ~ 8762582 (+)
eps8l1a eps8l1 other downstream 249044 8959248 ~ 8969045 (+)
asphd1 asphd1,LOC103374850,LOC102795844,LOC102314131 other downstream 326697 9036901 ~ 9042045 (+)
G153245 NA other downstream 363667 9073871 ~ 9116603 (+)
LOC120574336 NA other downstream 412402 9122606 ~ 9123105 (+)

Expression


Co-expression Network