LOC120575181 (LOC100708112,LOC103375341,LOC102791385,LOC101480711,LOC102216199)


Basic Information

Item Value
gene id LOC120575181
gene name LOC100708112,LOC103375341,LOC102791385,LOC101480711,LOC102216199
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8149353 ~ 8210405 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825837.1
GGCCCTTTAAATACcaaatcaaagatggctgccctCATTCACCAACCTGCAGTTGTTTAGCATGGAACTCTTTGCTAATTTCTAAAAAGAATCGAAAAGGACCCGGACCCACTGCTGCAGCAGGACGCACCGGCGGGATTCCCGCAGAAGTTTttcacgcgcacacacacagcacaacactGACAGCTGTCGGGATCGGAAGTTGCCTGCGTCGTCACGCACTCTGCCAATCCTCAGGACTGTGGTTGAAAGTTATGGTTTTGACGCTGGTTGTTACACAACAGACTCGCACAATGTTAAGGAGAGCCGGCGCTTTCAGCGTGTGTGGAAAATGATTGCAGCCAGCAGCGACCTTTGCATTATGGTGAGGAGATGTCTTCTCACTTTCAAACCATTCAGGATCTTTGTGGTGGGGATTGGCTTCTTCAGCTTGTGCTTTCTAATGACGTCCCTCGGGGGCCAGTTCTCGGCCAAGAGACCCGGAGATTCCCCCTTCACGGTGCGAGCCGAAGtgTTCGGTGGCCAAGAATCTCGTGGGGTGCTGAGGAAAATCAGTGAAATGCTGGAGGTCATTATGAAGAGGATGGATGCTCTGTCTAAACTGGGTAACACCACAGACAGCCACAGGCTGGATGAGCTCAGCTCGGCCCTGGACAGGATTCAGCCTATAGGACTATTGGAGCGGATTCAGGCCATAGCCCAGAACATGTCTGACATGGCAGTAAGGGTGGAGCAGATCCTGCAGCGCAGCATGGCCAGCGACAGAGtcAAGGATGGAACATTAGGACAATGTGAGATTCCTAAAGATCCCCGCTATCCGGACTGTCCCAGCAAGATGAATTGGATGCGCGCTCGTTGGACCTCAGACCCTTGCTATACCTTTTATGGTGTGGACGGCTCGGATTGCTCCTTCCTCGTCTACCTGAGTGAGGTGGAGTGGTTCTGCCCCCCACTGGCCTGGAGGAACCAGACCACTACACCCACCTTGAAGCCTCTGCCCAAGAGACAGGCTGTCTTCCAGTCTGACATCGGGGCTCTGCTGGAGCAGGTGGGCGCAGGGAAGGAATCACTGAGCTTCATGAAGAGACGCATACGCAGAATGGCAGCACAGTGGGCCTCCGCTGCTCGACGGCTGGATGACAAGCTCCGCAACCACTGGAGAGAGCAGAAAAGGATTCTAGTTCATGTGGGCTTTCTGACAGAGGAGTCTGGGGATGTCTTCAGTCCCAAAGTGCTGAAGGGGGGTCCTCTGGGTGAGATGGTGCAATGGGCCGACATCCTCACAGCCCTCCATGTGCTGGGACACAACCTCAAGATCTCGGTTTCCCTCAAGGAGCTGCACGGGTCTCTGGGGGTCCCTCCAGGAAGAGGAAGCTGTCCTCTAACAGGACCTCTGCCCTTTGACCTCATCTACACCGACTACCACGGCTTGCAGCAAATGAAGCAGCACATGGGTCTGTCACTGAGGAAGCACAAGTGCCACATCCGAGTGATTGACACCTTCGGCACTGAGCCTGCTTACAACCACGAGGAGTACGCCACTCGGCACGGCTACAGAACCAACTGGGGCTACTGGAACCTTCACGGCCAGCAGTACATGACCATGTTCCCCCACACTCCAGACAACTCTTTTATGGGTTTTGTGGCGGAGGAGCTGAATGAGACGGAGAGGCTGAACATTCAGCGTAACAAGGTTAACAATATGGCTGTTGTGTACGGCAAAGAAGCCAGCATGTGGAAGCTTCAAGGAAAGGAAAAGTTCCTGGCCATTCTGAATCGCTACATGGAGATCCATGGGACGGTGTACTATGAGGCACAGCGTCCTCCGGAGGTGCCCGCCTTTGTCAAGAACCACGGTCTGCTGCCTCAGCcggagctgcagcagctcctcaGAAAGGCCAAGCTGTTCATTGGATTTGGCTTCCCCTACGAAGGTCCCGCACCTTTAGAGGCCATAGCCAATGGCTGCATCTTTCTACAACCCAAGTTCAATCCCCCTCACAGCTCTCTTAATCATGACTTCTTCAGAGGGAAGCCCACCTCCAGGAAGGTGTCCTCTCAGCATCCGTATGCAGAGCAGTACATTGGCAGGCCGCATGTCATCACTATCGACTTCAATAACTCTGAGGAGTTTGATGCGGCCATCCGTGAGATCATGAGGATCAATGTGCAGCCATTCCTGCCCTATGAGTACACCTGTGAGGGGATGCTTGAAAGAGTTCATGCCTACATTCAGAACCAGGACTTTTGTTCCCCTGAAGCTCCGTTTCCTCCAGTAAACTCATCCTGGCTGAGCAGCCCTCCCAGTCCTTTCGTCCTCCTGCCAAACTCCAGCATCCTGACCTGGGCCTCCAACGCCAGCTCCTGCCCGTCCTGGCCACCCCTCAGCGCCCTGCGCCTTTTGGCTTCCCTGGAGGGCCAGTCGTGTGTGACGGCGTGCCAGAGTGCAGGACTCATCTGCGAACCTGCCTTGTATCGTTTCATCAACATCAAGGAGGCCTTCAGCGCGCTGGACCTGCAGTGTGACGGAGTGGAGTCCGAGATGAACCACCTCTTCCCGGCCTTCTCAGCAGAGCATGCTGAATGTAGCCTGCAGCAGGATCCCCTGCTGTTCAGCTGTGCCGGCTCCAGTGCCAAATACCAGCGCCTTTGCCCCTGCAGGGACTATCGTAACGGCCAGGTGGCACTGTGCAGAGACTGCCTATGACCAGAGGAGGATCTGTGGATGGAGACTTATTTCTAACACTTGGTGACATCTTGAATCTGTGGTGAAATGCTGTAACACATACACTTGAGTACTCCTTTACCTCTGACCAAGGACTGGCTGGAGGATGGAAATTGTAAGACCATATTACCTCTCAGGGAACTGCATGATTGTACTTTGATCTGGTGGGATTGAAGCCTCAGTTTAAAGGTTTACATGGCTGCATAGGACCACAGTCTACAAAAGTCACAATGAAATGTATCATTTGATGGATCAGTTAGATTAGTAAAGAAACCATGAGCAATCAAAAGGAAagctttgataaaaaaaaaaatattgcaaatGCTTGAAATTCACAAGTGTGTTTACTCAGTGTTGTGTGAATACCTACAGTATCATAGTGGAGTTTGGATATTTGTACTAGATGCACCCAAAGCTGTTTACACCATGTTGAGATGTACTACTTTACATGTCCTGTATGAATACATTTGTAcataaatgtttaataaaataCAGGGGATGAAAAAGTTGTTGCAATTGTTTGAATTA

Function

NR:

description
PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

GO: NA

KEGG:

id description
K09661 MGAT5B; mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825837.1 True 3253 mRNA 0.52 19 8149353 8210405

Neighbor

gene id symbol gene type direction distance location
LOC120574676 LOC100700674,LOC104966931,LOC106533983,LOC101072238,LOC103375364 coding upstream 37296 8102205 ~ 8112057 (+)
LOC120574880 NA coding upstream 116338 8016996 ~ 8033015 (+)
grapa LOC103375418,LOC100690405,LOC101484535 coding upstream 136735 7975714 ~ 8012618 (+)
b9d1 b9d1 coding upstream 215896 7928919 ~ 7933457 (+)
atf7ip2 NA coding upstream 779473 7357503 ~ 7369880 (+)
LOC120574874 LOC108243002,LOC102310090,LOC106516502,LOC103375333 coding downstream 25737 8236142 ~ 8252307 (+)
pecam1 NA coding downstream 208436 8418841 ~ 8428829 (+)
LOC120573853 LOC102215035,LOC103153318,LOC103469130,LOC106961933,LOC106906802 coding downstream 230783 8441188 ~ 8444379 (+)
alyref alyref coding downstream 239563 8449968 ~ 8453079 (+)
arhgdia arhgdia,LOC107372410,LOC107087451,LOC103153321 coding downstream 244784 8455189 ~ 8472412 (+)
G152826 NA non-coding upstream 36739 8112386 ~ 8112614 (+)
G152807 NA non-coding upstream 55506 8019930 ~ 8093847 (+)
G152823 NA non-coding upstream 57147 8088994 ~ 8092206 (+)
LOC120574886 NA non-coding upstream 75837 8071892 ~ 8073516 (+)
LOC120575520 NA non-coding upstream 76048 8073236 ~ 8073305 (+)
G152916 NA non-coding downstream 43117 8253522 ~ 8254810 (+)
G152942 NA non-coding downstream 176111 8386516 ~ 8386743 (+)
LOC120575098 NA non-coding downstream 285942 8496347 ~ 8501904 (+)
G152973 LOC104929519,LOC103375241,LOC102212394,LOC101477022,LOC104948534,LOC102794201,LOC102305637 non-coding downstream 295921 8506326 ~ 8511794 (+)
G152981 NA non-coding downstream 418303 8628708 ~ 8629645 (+)
G152892 NA other upstream 21372 8127265 ~ 8127981 (+)
emp2 emp2 other upstream 792515 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 874742 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 2192036 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 2377486 5725886 ~ 5771867 (+)
mcrip1 mcrip1 other downstream 235015 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 456065 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 486494 8696899 ~ 8701771 (+)
G153016 NA other downstream 546841 8757246 ~ 8762582 (+)
eps8l1a eps8l1 other downstream 748843 8959248 ~ 8969045 (+)

Expression


Co-expression Network