grapa (LOC103375418,LOC100690405,LOC101484535)


Basic Information

Item Value
gene id grapa
gene name LOC103375418,LOC100690405,LOC101484535
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 7975714 ~ 8012618 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825370.1
TGGTGGTGTGTTGCTGAGCAGCAGCCAGTCGTATTTTTCCCCTCGCCGAGCTCACTCTCATCCTCTGCTCTGACTCTCTCGGCTCCGCGGACAGACGAGACCTCTCCTCTCttgctcctcttcttctctctctctctctctctctctctctctcctcttcctgtctGTTATTTCATTGCATCTTCTACCTttatctgttattttttttatttttttttacatttctccctctatctcacccccccaccccccctgtgCCAGGGGCATTAGTGGGGGTcccagagagtgtgtgtgtagtgagtgAAAGTGTTGGATTTCGGCATGGAAGCAATGGCACTGTATACGTTTCGCGCCACAGAGGGTGATGAACTCAGTTTCAACAAGGGAGACTTGCTCAAGATTACCAACATGGAGGATGATCCTAACTGGTACACAGCTGAGCTCCACAACAGAAAAGGCTTTGTGCCGAAAAACTACATCAACCTGCGGCCACACGCCTGGTTTGCCGGTCGTATATCTCGCGGTGTGGCAGAAAGTCGACTCAGACACAGGGAGTGCGGGGCTTTTCTGGTCCGAGAGAGTGAGAGCGCCCCTGGAGAGTTCTCCATGTCTGTCAGTTATGGGGACCATGTTCAGCATTTCAAGGTGCTGCAGGATCGCTGCTGTCAGTACTACGTGTGGGACGAGCTCTTCCCCTCTCTGAATGAGCTGGTGGAGTTCTACCATAGCAACAGCATCGCTAAGGAGAGGACCGTCTTTCTGAGAGACCCTGAGCACTTCGCCAGGCGCCCCCATCATGCCCACGCTCTCTTCGACTTCgccccccaccacccctccCAGCTACGCTTCCTGCGAGGTGATGTCATCGAACTCATGGACTGCTCCGATTCGCTGCGCTGGAGGGGCCGTTGCCATGGACACGTAGGGTACTTCCCCCCGGAGTACGTCCAGCCCATTTACCACTGCCAATGACCCGGCACGTCAATCAAATACACAGCCATTCCCACAGGTTCATCAGTGAGCCGTCGTGACCCCGCCCTCCTCACACTGCTCCCCCGCTCTGCACTGCTCCCATTCACTTTTGGAGAACTGACGAGCTGCAACTGTACTGCTCATTATGTAACCGACTCCTCCCGTTTCCCCATCGTGATGCCACCTGCCAGCCTTGCCCAATCAGCTGCTACAGGCTCATCAATCACTTCCACTTGATCCCACAACTCCACTTACTCTTTAATcatgtaaaacaaatatatatatatatgactggACCTATACACTGTGGAGAActcacatactgtaaatatgcacacacagactgacaatcATCCCCATGCATAATCATTAATATAGCTTATTAGCACTGGTGCAGGCTGAataaaagcaacacacacacacacacctcatgaaAAAAGTGTGGCCCATAGGAGGTTGTGGAGGAATGGCAAGGTTTTCTCCGCTGAAGAGGAATTAGGATTTGCTCCAGTATTTTGCTGCCGTTCCCACGAAAGAGATCCGGTGAGCtgagcacagagacacacagagagtcaTTGTTGTGAATATTTGGGCCAGACACTCTGAGGATACTGACACAGCAGATTGCcctcttgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggggatAGTGTATAAAATGTGGGTCTGAACACATGTAAACTTGCAAACTTTAAGTATCTTTATGATGTGCAAAGGAAAAGTAAATGCATGTGGatatgggtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgcagccctGTGCTCTGTGGACCAGTAAAGGAGGTTACTATGTTAAAGTGACCAGTGAGGTGAACAATGCCCAGACGCCACTTGGTTTTAAAATACACAGCTTAAAAACAAATAGGCTCAACTCAATTTATGaatcatttgttcatttgtttCCATGTATTTATTCTTATTCATGTGTAATCTTAGAATACATATATTACAAGTAAGATAAAACATTGTGAAAAAGTTTTGTTTCTGTTGCAACGAATGGTtaaagaaaaccacaatgtaTGTGGTTAACGAACGTAAGAACGTGGACCGATCTTCCTTAACATGTAATgacaaataatttaaataaagtgaTACATTTACCTCTTTGAA

Function

NR:

description
PREDICTED: GRB2-related adapter protein-like

GO: NA

KEGG:

id description
K23694 GRAP; GRB2-related adapter protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825370.1 True 2170 mRNA 0.48 5 7975714 8012618

Neighbor

gene id symbol gene type direction distance location
b9d1 b9d1 coding upstream 42257 7928919 ~ 7933457 (+)
atf7ip2 NA coding upstream 605834 7357503 ~ 7369880 (+)
socs1a socs1,LOC100174889 coding upstream 770504 7202748 ~ 7205210 (+)
ndufab1b ndufab1 coding upstream 1062193 6909798 ~ 6913521 (+)
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding upstream 1074645 6893216 ~ 6901069 (+)
LOC120574880 NA coding downstream 4378 8016996 ~ 8033015 (+)
LOC120574676 LOC100700674,LOC104966931,LOC106533983,LOC101072238,LOC103375364 coding downstream 89587 8102205 ~ 8112057 (+)
LOC120575181 LOC100708112,LOC103375341,LOC102791385,LOC101480711,LOC102216199 coding downstream 136735 8149353 ~ 8210405 (+)
LOC120574874 LOC108243002,LOC102310090,LOC106516502,LOC103375333 coding downstream 223524 8236142 ~ 8252307 (+)
pecam1 NA coding downstream 406223 8418841 ~ 8428829 (+)
G152801 NA non-coding upstream 3354 7972083 ~ 7972360 (+)
G152794 epn2,LOC104949517 non-coding upstream 32026 7942541 ~ 7943688 (+)
G152759 grin2a,LOC104966804,LOC102780805 non-coding upstream 399837 7569836 ~ 7575877 (+)
G152757 NA non-coding upstream 467017 7495552 ~ 7508697 (+)
G152749 NA non-coding upstream 604214 7371154 ~ 7371500 (+)
G152807 NA non-coding downstream 7312 8019930 ~ 8093847 (+)
LOC120574886 NA non-coding downstream 59274 8071892 ~ 8073516 (+)
LOC120575508 NA non-coding downstream 60390 8073008 ~ 8073081 (+)
LOC120575520 NA non-coding downstream 60618 8073236 ~ 8073305 (+)
G152823 NA non-coding downstream 76376 8088994 ~ 8092206 (+)
emp2 emp2 other upstream 618876 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 701103 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 2018397 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 2203847 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 2328524 5626207 ~ 5647190 (+)
G152892 NA other downstream 114647 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 432802 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 653852 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 684281 8696899 ~ 8701771 (+)
G153016 NA other downstream 744628 8757246 ~ 8762582 (+)

Expression


Co-expression Network