ndufab1b (ndufab1)


Basic Information

Item Value
gene id ndufab1b
gene name ndufab1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6909798 ~ 6913521 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826084.1
CTTCGCCTTGCACGCTGGGAACCACCAGAATCACTTTTCTCCGTCATGGCGGCCCGTGTCCTGCAGCAGTGTGTCCGCACGCTCGCCCGGCCCTCGCTGAGGCTTTCCTCCGGTAACCTGGCTTTCAGAGCCGCTGTCGCCCCGGCAGCAGCCATTCACCGACCTCTATCCTTTGCCGCAGACAGCCGGAGGACGCGGTGGGTCGGTCAGAGCAGGAGCCCCTCAGTGGGAGTTTTGTGCCGACAGTATGGGGACCTGCCCCCCCTCACCATAGAAACCATCAAAGACCGCGTCATGTATGTCCTCAAGCTCTACGACAAGATCAACCCTgagaagCTGCAGACAGCCTCCCACTTCATGAAAGACCTGGGTCTGGATAGTTTGGACCAGGTGGAGATCATCATGGCCATGGAGGATGAGTTTGGCTTTGAGATCCCCGACGCAGAAGCAGAGAAGTTGATGACTCCCGAGGACATTGTACAGTACATCGCAGACAAGAAGGACGTTTATGAATAACGGGTTCTCTGCTATAGTTCACTACAGAGAGAGGTTGACCTCCCAGCTTGACCCCCGCAGGAAGTACATTTCCCACTTCCTCCCCGTCTGCTCTTCTGTGCATTAGGGCATCGTCGACGTCAGCTGCCGTGTCTCTGACTGTATTTAAATGAACATGTTCTTTCAGAGCttagagaaaaacaaaattcaAAAGTTATATCAcagttgtttctttttttttgttccttgCAGTTCTACAATG

Function

symbol description
ndufab1 Predicted to enable acyl binding activity; acyl carrier activity; and fatty acid binding activity. Involved in mitochondrial respiratory chain complex I assembly and protein lipoylation. Located in mitochondrion and nucleoplasm. Part of mitochondrial respiratory chain complex I. Colocalizes with mitochondrial large ribosomal subunit.

NR:

description
LOW QUALITY PROTEIN: acyl carrier protein, mitochondrial

GO:

id name namespace
GO:0006633 fatty acid biosynthetic process biological_process

KEGG:

id description
K03955 NDUFAB1; NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826084.1 True 757 mRNA 0.53 5 6909798 6913521

Neighbor

gene id symbol gene type direction distance location
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding upstream 8729 6893216 ~ 6901069 (+)
si:ch211-157c3.4 LOC102792881 coding upstream 53079 6850245 ~ 6856719 (+)
slc2a6 slc2a6,LOC107376396 coding upstream 66039 6837914 ~ 6843759 (+)
syngr3a syngr3,LOC108236246,LOC106516511 coding upstream 176594 6723383 ~ 6733204 (+)
gfer gfer coding upstream 189227 6718979 ~ 6720571 (+)
socs1a socs1,LOC100174889 coding downstream 289227 7202748 ~ 7205210 (+)
atf7ip2 NA coding downstream 443982 7357503 ~ 7369880 (+)
b9d1 b9d1 coding downstream 1015398 7928919 ~ 7933457 (+)
grapa LOC103375418,LOC100690405,LOC101484535 coding downstream 1062193 7975714 ~ 8012618 (+)
LOC120574880 NA coding downstream 1103475 8016996 ~ 8033015 (+)
G152613 NA non-coding upstream 6557 6902928 ~ 6903241 (+)
G152585 NA non-coding upstream 45558 6861045 ~ 6864240 (+)
G152586 NA non-coding upstream 52538 6856817 ~ 6857260 (+)
G152589 NA non-coding upstream 94966 6812686 ~ 6814832 (+)
G152578 rpusd1 non-coding upstream 149855 6757365 ~ 6759943 (+)
G152618 NA non-coding downstream 2070 6915591 ~ 6919778 (+)
G152635 cacng3,LOC104955459,LOC106516519 non-coding downstream 102209 7015730 ~ 7024650 (+)
G152645 NA non-coding downstream 162313 7075834 ~ 7080378 (+)
G152651 NA non-coding downstream 287104 7200625 ~ 7200853 (+)
G152749 NA non-coding downstream 457633 7371154 ~ 7371500 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 952481 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 1137931 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 1262608 5626207 ~ 5647190 (+)
G152125 NA other upstream 1359252 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 1445495 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 356607 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 426464 7339985 ~ 7356838 (+)
G152892 NA other downstream 1213744 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 1531899 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 1752949 8666470 ~ 8684765 (+)

Expression


Co-expression Network