G152618


Basic Information

Item Value
gene id G152618
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6915591 ~ 6919778 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206742
GTCATTGTTAGTCTTTTATTGTGGGTTGTACCCAAGTTTTACAGCTTTGTATGACGGCTGCAGGAGCCAGAGGGTTACAAACAGTAATCAGTATACGAGTACAGCCAACAGAAGACCTACTACTTACTACTCTACACCTTAGTACAGATTCTCTTAAGAGCACTAAAATTCAGAAAaataggagagaaaaaaaaattaaaaatacagaACAAACCAAGCAACAAAGGAAGGAGAATAAAAAGATTAAATGAAACCAAACAGACAGCATCAGAGGAGACATTCATTATTAGAGCACACTGGAGTTGGTTTTCTATACCTTGTAATATCAGGCGACTtcgtttttgtcaatttttataCCCATACAAATAAAGATTGTCCTTCAAAAAGTGCAGTTTCCCAAAGCAATGTGCATAATAGGTTTACAGGTGATCCAACTACACACTGTGGATTGATAGAAtctctattaaaaaaaacattgtagttgTGTAAAATTTGCAGTTTCACCGGCCTCACTCCCCTCGGCTTATCGAGGAGACAAgctgtgaaaataaagaaatggacTTTGCAAATCTTAACATGTCCTCCTCTCCTGCTACAACTGGCCCGACGGTTGCTAGgtaatgaagtttttttttaattattattattagtagtagtactaCGATTCAACGATGGCACATCATGTTTGAGGAATATTACTGGGAATTCCATCTCAACtgtttcttaaaaaaaggtttgggaatttttttatttttattttttatgaaagaaagcaaaaaaaccCAAGGTGGACATGGAAGCCTGGGTTCAACACTCCACTGCATAGTCTCTCTGAGCGACTCCCATTTCCACCCTCAGTGCTGTACCCCCCACCCcgccccacccacccacccacccacccacatcTTTGTGCTGGTTAGACTAAAGCTTTTCAGGGTTTTGTGGATTCATACTGAacgtaaaatgacaaaaaaaataaaaaataaaataaagacagcAGATTctcacagtttttctttttctatttttgtgtcaaaaagaaaaaatagccTTAGCGCTTTTGATCGACAGTAGGAGCAGTTGGGTGTGCATTATGATATAATATAGCATTTGCTCACAGGATAGTTAAGTCAAGAGAAAAACAGAgtcacattatttttattaaacattaaaaagtagTAGAGTTTCACCAGCCAGCTTCCCTCCTTTCCCACCCTCctttattccccccccccctcctctggcCCTGTCGGGAAGCTGCTTGGCAGCCTTGGGGATTGTACATTGCTCATGGTGGTTTTCACTTACTGAAAAAAAGGTTTCCTCACATCATCCTTTTGCaaatgacaatttttttttcttcaagcatTTAACATTGTCCAGCTTTTTCAATATACACACTTACACAtcaaccaaaaaaataaaaatgtatcaagCCTTTCCTTCCCTCTCACCCTTGatttggcacacacacacacacacacacacacagctgggaAGCTAAACAGTAACATCAATGAGAGGCGATTTACAGATGTTGCTTGTCCCTTCTCTAACAGCATAGCAATGCTGCCTCCTGAGCTGCTGATCAGACGTCAGTTTGTGTCCCACTAATTGGTTAACGTAAGGATACTGAGGAAGGACAAAACTGCGCACAGGTGAGCACTAGGAGAGAAGCACTGTCAAAATCAGAATGAACAAagtttaaaataatttcatCAAGAGCAGAAAGGGAATACAGACCATTTAGAGTTCACTTGCCCTAGACCTCCTGTCAGTTTTGCGTTTCCTCTCCTGTAGTTAAGCTTAGGAGTTGGAGATGGAGAGCTGATCCTGGATAGGCCATCAAAGAGGCTAAGTGTAACCCTGTGTCCCTGAAAAGCCAGGAAGAACCAGCCGATCACAAGCCACATCCCCTTGCCTGAGTCACTACGGGCCAGCAAGAAGCCTCACCCCGTTTCAGTCAAGCTCAAGACACGCGCATCTCCATGTCAACAGCCACCAATGATCACCATGACAACCAGGCGTGGTCAGAACAGTAGTCGAATACTGATTCAAAATACATAAACAGTGAGCAATGGCTGCTTTACTCGATTTTTTCCCCGTGCGGCGGTTCCAGGTTTGACCCTGATCCTGATCAGGTGCTAGAGAAGGCAGCTCGAGGCTCCAGCCGTCACTTCTACCTTTGAAACCGTTTTCAGCTACATTCTGGCTCCGCTCAGGCGGCGTGGCGGTGTCGCCGCTCTGACCCAACGGCCCAGTGAACAGGGAGAGGTAAACCTGGAGAGGACGACAAcccccctccctcttctctcgCTACCTCACTGGGGCCAACGAAAGCACCATCTTCTCTagtcataacacacacacacacacacacacacacagagagataacacacagacaactcAGACACACCTGAAAATTCAACCTACACCACCACGCTGTCTGACCATCCATCTCGGCTTTGCTCTCCAGTCGCTCAGCCTTTCCTCTAATCCACCAAAGTGCAAAATCCAAGGCTCCTCAGTTCAATTTGTCCAATTAAGTCAACtcaaaaacaaatgacaaacatGGTTTAGATGTTCCACTTGACATTTGTTacacaaaacaatatatatatatatacctatagacacacacagtttaagCAAAGAGATCTGGAATTAAGTAAACTAGTCTTTTGTATGATTGAATTATTTGGTAGAGAGCAGTTCAATACTGGCACACACCACTGTCAAGTCTGGCTAATACTCAAGGTTCTGTCTCACTACGCATGCTTTAAAGTTGTTAAATATTCACGACTAAACTTAAAAAACACAACTTAAGCCAATGTTTCTAGTActtctgaaataaaaacctATATCGGAAGGGggaaaacacgcacacacaacaggCTTAACACAGATTAATTACACaatgaagaaaagaaattaaGGTCCATGGCTTCGCTAATGCTGACTTCTCTTTAACGCACTCTCTGAAGCTTTAGTTTTTCCCCCCCGATAATTGTGCATCATAGTAACTTAACAATCAATGGTTGATAGGTAAATGTATTATTCACACGTGTATTTTGTCAACAAACATCCCTGGTGGATTTACATTCACGCTGTtctcacacacaaccacaactccTTCCCCACCTCCCACACTTTCCCCTACAATGGCAGAAGTCACATCTGCCGGTACAGAGcctcctaacacacacacacacacacaacgattCATCAGGTCTTGAACTTCAGACGAGTACCCCTCACTCCCCCAcccaaagaagaaaaaagaagaaaaaaaacaacagtacaACAATACAATCATATTCTATTTGTAAACAGGTAGAAGCCACTTGACTTGTTGTTGCATCTTCGGACACAATTAGGATCAAGGCAATGAAATGTGGACGACTTTTGCACTGTTAAAATATTATCTTCAACCAAAACGAAaagatttttaaagtttttctttcctttttttcaaaacacctTTTGTGGCAATGAgagcgattaaaaaaaaaacaagttaaagTTCGCATTTTGATGTACttaatgaaacatttaaaacattgtgTGAGACAcggggaaaaagaaagaaaatggaaaaaaaaaaaacgcctctCAGTAGGCCATGTGAGAGGCTACAGTATGCATAGATACAGATTTGCCTTTCTCTTGGTTTATAAGTCTGACAAGACAGAACATTTTcaactgtcacacacacacacacacaataaacactcCCCACTTTTCAGTggagtggaggaagaggaggagcaagGGAGCGTTGGGATTTCTACAGCCCGTCCTCCACCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206742 True 3811 lncRNA 0.41 4 6915591 6919778

Neighbor

gene id symbol gene type direction distance location
ndufab1b ndufab1 coding upstream 2070 6909798 ~ 6913521 (+)
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding upstream 14522 6893216 ~ 6901069 (+)
si:ch211-157c3.4 LOC102792881 coding upstream 58872 6850245 ~ 6856719 (+)
slc2a6 slc2a6,LOC107376396 coding upstream 71832 6837914 ~ 6843759 (+)
syngr3a syngr3,LOC108236246,LOC106516511 coding upstream 182387 6723383 ~ 6733204 (+)
socs1a socs1,LOC100174889 coding downstream 282970 7202748 ~ 7205210 (+)
atf7ip2 NA coding downstream 437725 7357503 ~ 7369880 (+)
b9d1 b9d1 coding downstream 1009141 7928919 ~ 7933457 (+)
grapa LOC103375418,LOC100690405,LOC101484535 coding downstream 1055936 7975714 ~ 8012618 (+)
LOC120574880 NA coding downstream 1097218 8016996 ~ 8033015 (+)
G152613 NA non-coding upstream 12350 6902928 ~ 6903241 (+)
G152585 NA non-coding upstream 51351 6861045 ~ 6864240 (+)
G152586 NA non-coding upstream 58331 6856817 ~ 6857260 (+)
G152589 NA non-coding upstream 100759 6812686 ~ 6814832 (+)
G152578 rpusd1 non-coding upstream 155648 6757365 ~ 6759943 (+)
G152635 cacng3,LOC104955459,LOC106516519 non-coding downstream 95952 7015730 ~ 7024650 (+)
G152645 NA non-coding downstream 156056 7075834 ~ 7080378 (+)
G152651 NA non-coding downstream 280847 7200625 ~ 7200853 (+)
G152749 NA non-coding downstream 451376 7371154 ~ 7371500 (+)
G152757 NA non-coding downstream 575774 7495552 ~ 7508697 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 958274 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 1143724 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 1268401 5626207 ~ 5647190 (+)
G152125 NA other upstream 1365045 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 1451288 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 350350 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 420207 7339985 ~ 7356838 (+)
G152892 NA other downstream 1207487 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 1525642 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 1746692 8666470 ~ 8684765 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location