G152645


Basic Information

Item Value
gene id G152645
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 7075834 ~ 7080378 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206772
TTCTGCATGTTTTTTCCTTTAAGTCATCAGACCTACTCTCCCCCATCAGGGAAAGGCTCTTATGATAAGTGGCAGCCATGAAATATGCACAGCCTGTCGTAGCCGCCTGCCCCGCTTCACAGAGCCTCGTTTTGCTTCCTCGTCCCCTCCCTTTCTcctttcctctgtctcttcttACTACCTCCTCCTCTGTTCATTGTTGAATTGAtcccctcttcttctctttcaccTGTATTCCTTTTTCTTTAACCCTCCATCATTCTAATCTCTTTCTCCTATTCTTTACTCCCCACAGcgactttttttaatcacatcaaaatgtaggctacacagCGGAcatcatataaacacaaaaacaacagcaaacaCCCCCTAACACATCTTTTAAATCCTTTATTTTAGATATGCCTGTTTTTcctggaaaataataataataataattttggcGCATTGAAAGCATTGTGAGAAGTATTTTCTTAGCACACACAACAGTAGCTTGGATCACACTTTGGAAGCTATGCGGACACAGAAAACATAAATCACCTTAATATGTTAATTGTATATAAATCCTAACtaataaaaaggtaaaacaaaAGAATTTTTTCATGCAGAGTTGATTTTGCTTCTCCTTCGGCAGGAAGGAATCATATGTAGAAACAAAACCACAAATCCTGGAGTAAAACTCTCATCCTTTACAATACTGACCACATGGTGTAAATATCAACATTTGACACAGttatatatgtttatgtatatatacttaTTTGTAGTTGTTATAATACAGGTGACACTGACCGTAATATTGACAATGGAGGTACGGCACAGATAATGGAACACAGATTTTGCTTTAGGTCATACAAACACTGTTGTTGCGTTTACATTCAGTCTCATAGTGGACAGACAGGACCAACGTTATCCAGATTTTAGTTAAGACTGTCCTTAAATCAGGGACTTTTCCGCCTCATCCATTAATCCAATCAAAATGTCAAAGTTACTTCAGGGAACAGCTCTCAATGCCACCAAAAAGGATAATGCAAACATGCATTACAGGGGGCTGTGTTTGAACATATTTTGATCAGTAATTAGACAACTAAAAGAGAACTAAGCCAGTGCATGGTTTTCAAGTCTGAATTCTTGGCATTCCCTCAGCTTTCAGCTAAACCTTCATGTGGCCCACTTTATAAGCAGAGCACAAATCACCACAGTCCTGCAAAAATGATCTCTTTCAAATGtttcaattctttttttaaattgcaaatGACATTTTTCACTTTATGTTATGATATTCAAAAGCTTATGCCAAACTTGAGTCAAACTGTCTTTGTTTTATCTACAAATATAACTGTTGTTATCAGAAAATTGTATGTGAAGATCCATTGCCTTCTGCAATAAAGTTGAAGCAAATACTTTAGGAAAACCCTGAATTACAAATTTtctgttttgaaaaaaatcattatttttCTAATTCACTATCGATCACCTTGGATACATTGATCCCTCCTCAACTTCCAGTAACTTCCATACTGCAGATATTCTAAGATATCTGTTACTATCGTCATGATAGTGTCCATTACTAGTCACGCTTGTGGAAACCACAGTGACTCCCACGCCTGTTAGCACGAAAGATAACCGTTCAACTGAAATACCCGTATGACACTGTGGCTTTATTCTTCTTCATGTCACTACAACTGATGAACATAAGTGAACCTGAATGTGTGATATGAGGACGCACTTCAGCCACTTCCACACGTTAGCTGCTCTGCACTGAAGTGTATAAGGTACTgccatctttctctctggcTGGATAAATATGCCCACCAATAAGCTTCATAACCTCACAGCCTCTTGCATGTGAATTAACTACAGTCCAAATCTGAGCCTTCTGAAGGTTGGTTCAGTACCAATGCAGCCTTCCGGTCAACAAAATTATTGCTAGCTAGAGGAAACAAGAGACCAAGCACACACATGTTCCTGCTTCAGCAGGCCTAGCTTTAACCTGTGTCCCCAATTGCTACTGCTGTGAGCTAGGATGGGAATTTTTGTTATTGCGCATGGAGATGACTATTTGAAAGACACCAATCACATTAAGTTGAGCCTCAAATCCTTTCCCACATAGCCAAAAAACTAGATGAGAAATGTAGAGCTGCATGAAATATTGGAACGCAGTTTGAAATCCAGCTAGTGGCCTTTTCTTCTACCACAGAAACTTTCCCCAGGCTTGGGaactttttttgaaatgctTAGGTACTGAACCTGCATTTTGAAAGCAGCATTACATTTTAGTTTCCAGGCCATAGAAAATAACTCTAGTACTGAGGTGGTTCTTTCCAGGAACTATTGAGGTGGACTTTGCAGTACTTATTGTCAATACAAGCTTTAAGATACTGACCTGTATACAGCTTTCATTAAGACTCCATGTAAGCACTAATTTTCTCTAGTATCACTACTCTTTTGCTAACATCAAAACCTAATATTATTTGCTAATTTTTTCAATTTCAGTATCACGAATTCCTTCTTCTGTACTTCCATCCTTTCTCATCTGTGACTTGCGGAGCCACTGGTTGGAAGTAAAGTGGATCATACCAAGACTGCTTGATATGAGGGGTTGCAGACACTTACCATGCAGACAAATGTAAACACAAGGCTAGGCAAGGCGCTGGGAATGCAGGTATTGATACACATACAAAAATGCAAAAGCAAACGTGCGTATTCATTCACATTCACAGTACTCGTTCGCacacatataaaacatacatgtgcacacacattcgTTGTGAAACGCCTGTTATCTGAATCATGCTTTTGTAATACACAAAGAAACTAACTGCTAGTCTCTTTCATTGCTTATATACTAGATAACAGAAAATGAGAGTATAAGAAGTAGTATTATCCATTTAACGGACTCAAAGCCTATATAAGGACTGCATTTCCCAACAGCATTTTACCATCATTACCCCAGAGCTCGATAGCAAATAAGACACATAGAAAATCTGATATTTGTGGTCTTTTGTGGCACAAATCTTCCACTGCCTCAATGGGTAAAATAATACACcaaatttcattttcttttttaataatacatatttcgaaaaccattaaaaaaacagccacacaacagcagcagaggggTGCAGAGATAAGATGCTAAAATGCTGCTGGGAGACAAAGTCCAGGGCTATAATTGATATAGAAACTCATGCACAAGTATGTGAAGCATTCCAGTTTTAGCTAAGATAAGGATAAACGTACAGACACTACTACTATTACACATTGAATAAAAAGCACACCAGAAGTACAGGCCAAACTCAGAATGCGCTGAAGTAGTCGAGGAATGACTAAAAGAAAAGTTAAATCACAAGTTCCAccagaaaaagtaataaaatggAATCCTAAAGCTATGTTACATGTGAATTATGctattgtgtatttgtgtgtgctggggGGGAATCATGACTCGACTACTAATCTGTAGTTAGGTTGTATATGAACTGCGTTTGTGACaatgcaattcttttttttaagaatcaTTTTTGTCCCTCAATTTAAAGTTTGGATTTTAAGGGTCACCATTCATTTCTAATCCTCATTCCGACGAGGTCTGGTAAATTAAACACAATTTGTTCACACTGAGCAACAAGATTGTGGTGAATCACACTTCcaagcttcttcttctctcaaAAACAAAGGTTGGAGAAAGTCACTGACTCTAGCTTAGTAACATTTTGACCATGTAGAAGCATGGAAAAATACAGAATTTGTTCGCTGTAATTATCTCAattaaaaccattttttttccccGGAGCAGCACAAGAGCGCTACATGCATTCAGGCAATTGTATACTGCACATGCACCCTCAGAAGAAGCCAACACATCATTCAGGTTGCAGCAGCAGTGTGAACAacaaatatgtgtatatgtgttattGTTTATATGGCATTTCTATGTATCAGTATTAAGTCATGGCTTCTTGGTTCTTGTAACTGCACAAATCATTTCCAGGATATTTAAAaattatatgtttgtgtgtttctatgttccGGGGTACACAGGGTTGATACTGGGGAAAATGAttatgtatatgtttgtgtgtgtgtgtgtgtgtgtgtgtgtttatgtgtccgTGCATGAGCTGAAATCAAGCCTGCTCGGGGGCAGTGGTGGTAGGGGCAGTTCCTGGGAACTCAGGGTTGATAAAGGAGAATCCCTGGAACTCGTCCTGGTCCAGGTTCTGAATCACTTCCTCATCGGGAGGGGTCAGCACCGGCGGGTGGCGTGTGAAAAAGCGGTCAAAGTTCTCGGCATCCCGTCCACACtggaGGACAAGGAGAGGGGTGGATTGGGAAGGGGatgaggagggatggagaggaatGGATGGATCGGGGAGGGGTttagggagaaagagaggaaaacaaaagaAGGGGAATGGTGGGTTGAACCAGGGTGTGAGATGACATTACTTGAACATGGTTTCAAATATCAGTAGTTGGGGGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206772 True 4495 lncRNA 0.39 2 7075834 7080378

Neighbor

gene id symbol gene type direction distance location
ndufab1b ndufab1 coding upstream 162313 6909798 ~ 6913521 (+)
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding upstream 174765 6893216 ~ 6901069 (+)
si:ch211-157c3.4 LOC102792881 coding upstream 219115 6850245 ~ 6856719 (+)
slc2a6 slc2a6,LOC107376396 coding upstream 232075 6837914 ~ 6843759 (+)
syngr3a syngr3,LOC108236246,LOC106516511 coding upstream 342630 6723383 ~ 6733204 (+)
socs1a socs1,LOC100174889 coding downstream 122370 7202748 ~ 7205210 (+)
atf7ip2 NA coding downstream 277125 7357503 ~ 7369880 (+)
b9d1 b9d1 coding downstream 848541 7928919 ~ 7933457 (+)
grapa LOC103375418,LOC100690405,LOC101484535 coding downstream 895336 7975714 ~ 8012618 (+)
LOC120574880 NA coding downstream 936618 8016996 ~ 8033015 (+)
G152635 cacng3,LOC104955459,LOC106516519 non-coding upstream 51184 7015730 ~ 7024650 (+)
G152618 NA non-coding upstream 156056 6915591 ~ 6919778 (+)
G152613 NA non-coding upstream 172593 6902928 ~ 6903241 (+)
G152585 NA non-coding upstream 211594 6861045 ~ 6864240 (+)
G152586 NA non-coding upstream 218574 6856817 ~ 6857260 (+)
G152651 NA non-coding downstream 120247 7200625 ~ 7200853 (+)
G152749 NA non-coding downstream 290776 7371154 ~ 7371500 (+)
G152757 NA non-coding downstream 415174 7495552 ~ 7508697 (+)
G152759 grin2a,LOC104966804,LOC102780805 non-coding downstream 489458 7569836 ~ 7575877 (+)
G152794 epn2,LOC104949517 non-coding downstream 862163 7942541 ~ 7943688 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 1118517 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 1303967 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 1428644 5626207 ~ 5647190 (+)
G152125 NA other upstream 1525288 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 1611531 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 189750 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 259607 7339985 ~ 7356838 (+)
G152892 NA other downstream 1046887 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 1365042 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 1586092 8666470 ~ 8684765 (+)

Expression


Co-expression Network