atf7ip2


Basic Information

Item Value
gene id atf7ip2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 7357503 ~ 7369880 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824631.1
aaaggaaaaaaagagggagccGTTTGCAACGTTGCAAAGAAGTGTCAACTGACGATGTCAACCCACTCACTCAGAATGAAGAGGTTGCTGTCAAGGCCAGCGTCCTCTGGAGCCAGTGAGAAGAAGATTAAAGTCTCCCAACCTCAAgtgCAGACACTGATCGAGCAGGAGGTTTACGCTGCACTGAAAAAGAATGAAACCAAGCTGCAGGGTTTAATCGAACAGCTGGATCCTCCAGTCGACTATGAAAGCGCCATCCAAAAACTGGAGGCTCGGATTAACACGGTAACCAAGAAAGCAGAAGCAGCTATCTCCTACATGACAAAGACACAGGAAATGAGCCCACTGCCATCTCTTTTTAATGTCAAGATCATCAGTGCAGACTCTGAGGATGAAACCATGGAAACCAAGTCACAGActgacAAAAAGAGCATGGGCAAAAGCAGAGAGCTCTTTAAAATGATGGAAACCACAAATAAGGCGCTAAAGAAGATGCATGCGGATAATGAAGATTTGAAGGCTGCCATAGCAGATTTCAGTGAGGAAGAGCCGCCTCCGGTTCTTACTCCCTATGGCTCTCCTGAGTGTAAGGGACTCGCCAAGTTAATAAAGCAAGAACCAGACGTTGAGCACATGAAGAAGGAGCCAGAAGATAAGCAGGAGGAAAAGAACAGTGTTGAGTCCGAGCAGTGTAAAGAACCAAAGGCTAAGAGGATAAAAGAAGaatgtctctctcctcctggcACTAGTAACTATCCCAAGCACACAGACTTTgagcagGACCGGCCCTTGTAtcctcctcttccctccacCCCCTTCCCCTCCATCCTGAGCATGGAAGCGGCGTTGTACAACATCCCCCAGAAACTAGTAGTACGTGTGGCTCTCATCAGGCACCCCCCTGGCCTCTCGGTGCTCTGGAATGTGGAGGAGGAAGACCCCTCTGCGCCGCCCATGGATAGTTATAGCGTCTTCATGACTATGGAGAAGGTTAAGGGTAGCAACGTCTTCCCAGATTGGCGGACCGCTGGTGAGGTGAGGGCCATCCCTCTGCCCACGTGTGTGTTGATCACCAAGTACAAGCCCGGGCACAAGATGTGTGTCGCTGTGGTGGGCAAAGACAAGTTTGGCCGGTACGGaccttacagtaaagttataaCCGCAGTCGTACCCGATACATTGGGAGAAGGATTTGGAGTCAAGGTAGAGACAGCCCAAGCAGCATTGGGAAgatagggattttttttttttggttgttttttaaaGTCAGTGTTACAAAATGTTATGTACACAGTTGTACATGTTAAGAAACAAAACCGAAGTGTGTTAATAGAAACTAGAACTAGAATACTTCTGCCCTCTAGTAGTGATTACGGTACCAATGGACCTTGTTTAAGGAAGTTCTTTCTCTGTTGGTTTGTCTGCCACTTAATGTAGAAGCAGGTTAAGCCATAAATAAACATGCGTTGTTCTTTCACTTCGACGAAATTGTGAGTTCACAAACCTTTAGTAATGTAATGATACATTtaaatacgttttttttaatgagcttATAAAGTTGACAATGTTTAAATGTATGctctcctttttatttataaagtaaaagtcttaaacaTTG

Function

NR:

description
PREDICTED: activating transcription factor 7-interacting protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824631.1 True 1618 mRNA 0.45 13 7357503 7369880

Neighbor

gene id symbol gene type direction distance location
socs1a socs1,LOC100174889 coding upstream 152293 7202748 ~ 7205210 (+)
ndufab1b ndufab1 coding upstream 443982 6909798 ~ 6913521 (+)
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding upstream 456434 6893216 ~ 6901069 (+)
si:ch211-157c3.4 LOC102792881 coding upstream 500784 6850245 ~ 6856719 (+)
slc2a6 slc2a6,LOC107376396 coding upstream 513744 6837914 ~ 6843759 (+)
b9d1 b9d1 coding downstream 559039 7928919 ~ 7933457 (+)
grapa LOC103375418,LOC100690405,LOC101484535 coding downstream 605834 7975714 ~ 8012618 (+)
LOC120574880 NA coding downstream 647116 8016996 ~ 8033015 (+)
LOC120574676 LOC100700674,LOC104966931,LOC106533983,LOC101072238,LOC103375364 coding downstream 732325 8102205 ~ 8112057 (+)
LOC120575181 LOC100708112,LOC103375341,LOC102791385,LOC101480711,LOC102216199 coding downstream 779473 8149353 ~ 8210405 (+)
G152651 NA non-coding upstream 156650 7200625 ~ 7200853 (+)
G152645 NA non-coding upstream 277125 7075834 ~ 7080378 (+)
G152635 cacng3,LOC104955459,LOC106516519 non-coding upstream 332853 7015730 ~ 7024650 (+)
G152618 NA non-coding upstream 437725 6915591 ~ 6919778 (+)
G152613 NA non-coding upstream 454262 6902928 ~ 6903241 (+)
G152749 NA non-coding downstream 1274 7371154 ~ 7371500 (+)
G152757 NA non-coding downstream 125672 7495552 ~ 7508697 (+)
G152759 grin2a,LOC104966804,LOC102780805 non-coding downstream 199956 7569836 ~ 7575877 (+)
G152794 epn2,LOC104949517 non-coding downstream 572661 7942541 ~ 7943688 (+)
G152801 NA non-coding downstream 602203 7972083 ~ 7972360 (+)
emp2 emp2 other upstream 665 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 82892 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 1400186 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 1585636 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 1710313 5626207 ~ 5647190 (+)
G152892 NA other downstream 757385 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 1075540 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 1296590 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 1327019 8696899 ~ 8701771 (+)
G153016 NA other downstream 1387366 8757246 ~ 8762582 (+)

Expression


Co-expression Network