G152585


Basic Information

Item Value
gene id G152585
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6861045 ~ 6864240 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206704
tttgtttttatagaAAATTTTATTCAACATACATTTTCCAGCAAAAAGGCAATATACAGGAATAGTTGTCGTACACTGCTGCTACACTGAGGAATTTAAACTGGAAAAGATCAAATTAAGGTGTGATTCTGCAGGTCATCTTTGTACTGCACTTTTTAACAAGACAAAACCAATGCAGTtagttttgaaaagaaaaataaatccaaaTGTAACAGAAGAAACTTGTCAATGGTACATCAGgaacgaaaaaaaaaagaaagaaaaccctACACACAAGAAATATGAACACCTGGCTCCTTCTGTACCCAACAACAAAGGCGTGTGTTTCTCTTAAATTTTACACgttcatatttttaaatatacaatTTTTAAATGTTGTCTTTACAGAGCCAGCTATGCGCTATTAGGGGAGCATTCCATCTGTgctttaaaagaaacaaaagaaaaataaattcatAGGGCTTAAAGTGTTTCTTACAATGCTGGTTTTGTCTCTACACAACCCTCAAACCTGTAGGATCGAAGTGTCTGCAGCGCCCTAGTAAGCACAGCGCAGTTACTGCTCCCAACCACCTGGAGGCGACAGTTTCCATCAATAGAGAATATGAAgaagcttgtgtgtgtatgtgtgtgtgtttaagtttaGAGGAGGAATGACTGAGAAAGACATTAAAAccccctgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagagaatcaaGGGCTAATGTGCTTGCGTGtttgtgttcctttaaagtcaCTGAGCATCTCAAAACCACAAAATGTACATTGCCAGTCCTGAGAATCCTCTGACATTAAGTGCCAACGTGCAAgatgaaatacagacaaatttcctccttattttttttccccatttatttttaaacagatgctgtggatttttattttattatacaaGATCtgcagaaagagacaaaaaaaaatatatatataatttttccTCCAACCAAACAGTGAGAAACAATTGTGTGTAAACTTGGGAATACTTGTTTTGTTGCACTAAAGGAtgggagcaaaaaaaaaaaaaatatatatatatagaaccaCATCAGGGCAACTACCGAGCCTCAGGATGGACGCCATTTTGCATCTGCAAAAATGACCATCAGGCTCTTTCCCCCCCCATCTTTTTCTGTCAGTTAGTTCTCACAAATATCCTTTCATCAAACTTTCCACACAGCAGAATGACACCTCTTCAAACAATTCTATTTAAAAACAACCCCCAAAAGAATctgaagggagaaaaaaaaagcgtgGGATGATGAGGTGGGAGAAGGAAACAAAAACTTAGTCTAGaagttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatacttaTATTTATACTGTGTCCTACTACCTCTCCGcttatttaatattaaaatcCAATTTCATGTCTCCCACTTCCagacaagcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattacgggCAGTCAACAAGGTAGAGAAGCCAGGAAAAACAACCGAACAGCCTCAAACGTGGAggggggacgattaaaaaaaattaaataaacaaaatcaacaatcagCAGGTGGTTGGTGcagtttattttgtggttgaAGGATAATCCGTCAGCTGCAGCAAAATCCCAATCGCTGAAGACATAGTGCCGGTGTAGAGCTGTAGAGGTGTCCAGGCAGGGTGTTAAAagtgatgaacacacacatacgcacgcacgcacgcacacccacccacccacacggtctcacacacacacacacacacacacacacacacacacaaacacacacgtacgCGCACGGTTGGTTACAGTCTGTGGTTATGGTGTGTTAAAGTAGGTAGGGAGAAAGGCGGagcaggaggatgaggaggacaAAAGGGAAGGGCGGGCTGCTTTTAGTTGTGGATCTTGATTGCTTTCTCCAGGTAGGTGTAGCGACCTCTCTTTGGAGCTTTGTTGAAATGATCCAACCCTAGCCAGGGGCGCGGGTGGGACATGTTACCTGGGTGGTTCAAAGTCCTTCAGGTTGACCTCATACTCGTCTTCAGTGATGTACTGATGCCGCCCCATCATCACAATCGCAAACTTGAACTGAGaacaaacgcacacacgcatgTCACTTGACAGCCTACCACTGTTTACCTGCGGAACACTAAATACTGTGAAAAAATATTCAGACTGATGGGTTATATGGAGCTGTGCCACACTTCATGTTGAATAAAACAGTTATTTACTCTAACACGCCCTATACACAATACTATGCATAAAACTAGAACTGTTACAGTGACATttattgaaaaatgtgcatCAATTATTCACTGGGAAACACTTAAAATGCACTCAATACAGCAAATTTCCTCTGGTTGTGCAAACAGACTGAGGTGTACCTTCTCAAATTCTTTCTCCTGAATGTCCAGCATGGTCTGGATCCTCCTCATCACCTCCCGAAATGACTCGCCCTGTTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206704 True 2485 lncRNA 0.40 3 6861045 6864240

Neighbor

gene id symbol gene type direction distance location
si:ch211-157c3.4 LOC102792881 coding upstream 4326 6850245 ~ 6856719 (+)
slc2a6 slc2a6,LOC107376396 coding upstream 17286 6837914 ~ 6843759 (+)
syngr3a syngr3,LOC108236246,LOC106516511 coding upstream 127841 6723383 ~ 6733204 (+)
gfer gfer coding upstream 140474 6718979 ~ 6720571 (+)
flii flii coding upstream 259072 6585961 ~ 6601973 (+)
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding downstream 28976 6893216 ~ 6901069 (+)
ndufab1b ndufab1 coding downstream 45558 6909798 ~ 6913521 (+)
socs1a socs1,LOC100174889 coding downstream 338508 7202748 ~ 7205210 (+)
atf7ip2 NA coding downstream 493263 7357503 ~ 7369880 (+)
b9d1 b9d1 coding downstream 1064679 7928919 ~ 7933457 (+)
G152586 NA non-coding upstream 3785 6856817 ~ 6857260 (+)
G152589 NA non-coding upstream 46213 6812686 ~ 6814832 (+)
G152578 rpusd1 non-coding upstream 101102 6757365 ~ 6759943 (+)
G152525 NA non-coding upstream 211711 6648730 ~ 6649334 (+)
G152502 NA non-coding upstream 431739 6427923 ~ 6429306 (+)
G152613 NA non-coding downstream 38688 6902928 ~ 6903241 (+)
G152618 NA non-coding downstream 51351 6915591 ~ 6919778 (+)
G152635 cacng3,LOC104955459,LOC106516519 non-coding downstream 151490 7015730 ~ 7024650 (+)
G152645 NA non-coding downstream 211594 7075834 ~ 7080378 (+)
G152651 NA non-coding downstream 336385 7200625 ~ 7200853 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 903728 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 1089178 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 1213855 5626207 ~ 5647190 (+)
G152125 NA other upstream 1310499 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 1396742 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 405888 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 475745 7339985 ~ 7356838 (+)
G152892 NA other downstream 1263025 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 1581180 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 1802230 8666470 ~ 8684765 (+)

Expression


Co-expression Network