G152589


Basic Information

Item Value
gene id G152589
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6812686 ~ 6814832 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206709
GCTTATCCAGTAGTTATAAAATAGAGCATTGTCCATATGTTAACATCTAGAACtgtacaacaaaacaaagaccATAAAGGAGACAAAATCAATTGAGTAAAACCTATGAAAtgcacaaagaagaaaaaaaataacgctGACAATTGAAGAAATGTTGGATttacaaataacaataaatcaGAGTATCTGTGTTTCGTATAGTATACTGACTGGAGTAATGCAGGAATAAATGTATTGGTAAACAACGGTTTACATCCATATAGAGCTTCATGAGGGACACTTGTGGGTATTTCTCAACAAAAAGAGATTTTATTCAGTGGTAGGCCAAAGTGCAAACATTTGGAGGTGTTACATATGAAGTTAGTACCTATGAGAATCAACCTATTTTTTTACTGACAGTAGtacaaactatatatatatatatatatatgctcagTAAAAGCtgacagaaaaagagaaggaaggatCTGTATCTCCATGTAATAACAGACCAACTGAGACAAGGTTCAACATAATCAGGTCTCTCCTCAAAACGCACTTGTGAAAGTCTTTAACTATGGGATATGTCAAGTCCAAACTCTGCCTGACCATACATGAGCCCAAACCACacacttaaaatattaaatattaccaATAAATAAAAGCATTCGCTCAGTGCAAAACTAAAccataatggaaaataaaaacttttctgACGTCGCCACAAAAACCTTGTTTACCAACCATGAACACTCTCTCACATAAAATCAGGTTTTCGAAGCAAACCACTTTAAAGGTCTTGTTTAGTTCAATAGCAAGACATAAAGAGCAGACATctgaattatttaaaaaaatatataatgaatcaatgattaaaggtgcagtaggtaagacttataaaactaactttctgttatatttgctgaaactgaccctatgttcaagtagaactacatgaaggaggtaataaaaaaataaaaataaaaatccagctccttctggcaccacctacagcctgcagtgcgatttgcaaaaatccaccactccctgttcagatgcaccaatcagggccgggggggggggggatgtctaactgcgtgtcaatcactgctcatgcacacgcattcattctccctcgtAGGGGGACGGGCTTAGGTTACCTTTTTGGGCTTTaacggaaaggggggagggactgagaagttgtcgatgttcaaatgttttggctaagtcctggatcttcccaatcctacctacggcacctttaatgaCGTACCACCTCACGTGATGTAGAGGAGACAGAATGAGACTAAGAACAGACAGAGCGATGTATGTGTGGCTGTTTTTTTGTGAACAAAAGCATCTGGTTTCCCCAATTACCAgctaaaacaaatcaaaacgATCCTTCTCACCTGGATTTCCTCTCTTCCAGGCATAGTGgcggttttattttgaaaatatccTGTCATTCAGACTTTAATTGACCCCATACATAAAATGTCAGGAGCGAGGTCTGTGAACACGTATAAGCACAGGAAAAAAATCCTCCAATAAGGCAATCAGAAAAAAGGGTAGAAAAGCCCTGTGAAAAGGTATCATTTGATGCCTCAGCACAGCAaccaccaaacaaacaaactgtgaTAACAGTCAAGGAAGTCAGAATCCTTTCAAAGTAAATCATTCACACAGATTCAACAGAGTAAATGTATGCGTCGGGTGCAGTTCATTTTTACTTCCATTGTTTACACCAAGAGCAGTTTGATATTTAAACGTGTCTTTTTGTTAATGACCCAGGGTTTCCATGTGTTGTCATGGTGACCATTTTGGCATCACAGAATAACAAAGACCTCTTGGCCCTTGTTAGTGTCCTGCATAGAGCTTACGAGGCATCAGGTGGTCATAGTTCATGGATCAtggatgtgtgtatatatatatatatatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattatgtctGCGCCACCTGAAGCTCCTCCAGTCCGTGTTTTCCCAGGTGATATCTGGCCAAGTCTTTCCTTGTCACCAGTCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206709 True 2062 lncRNA 0.39 3 6812686 6814832

Neighbor

gene id symbol gene type direction distance location
syngr3a syngr3,LOC108236246,LOC106516511 coding upstream 79482 6723383 ~ 6733204 (+)
gfer gfer coding upstream 92115 6718979 ~ 6720571 (+)
flii flii coding upstream 210713 6585961 ~ 6601973 (+)
LOC120574685 LOC103361811,LOC106920476,LOC102795685 coding upstream 271950 6431422 ~ 6540736 (+)
LOC120574286 NA coding upstream 424322 6351622 ~ 6388364 (+)
slc2a6 slc2a6,LOC107376396 coding downstream 23082 6837914 ~ 6843759 (+)
si:ch211-157c3.4 LOC102792881 coding downstream 35413 6850245 ~ 6856719 (+)
c15h16orf72 c17h16orf72,LOC104917635,LOC103362395,LOC102775918 coding downstream 78384 6893216 ~ 6901069 (+)
ndufab1b ndufab1 coding downstream 94966 6909798 ~ 6913521 (+)
socs1a socs1,LOC100174889 coding downstream 387916 7202748 ~ 7205210 (+)
G152578 rpusd1 non-coding upstream 52743 6757365 ~ 6759943 (+)
G152525 NA non-coding upstream 163352 6648730 ~ 6649334 (+)
G152502 NA non-coding upstream 383380 6427923 ~ 6429306 (+)
LOC120574684 NA non-coding upstream 401722 6402320 ~ 6410964 (+)
G152480 NA non-coding upstream 422390 6389776 ~ 6390296 (+)
G152586 NA non-coding downstream 41985 6856817 ~ 6857260 (+)
G152585 NA non-coding downstream 46213 6861045 ~ 6864240 (+)
G152613 NA non-coding downstream 88096 6902928 ~ 6903241 (+)
G152618 NA non-coding downstream 100759 6915591 ~ 6919778 (+)
G152635 cacng3,LOC104955459,LOC106516519 non-coding downstream 200898 7015730 ~ 7024650 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 855369 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 1040819 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 1165496 5626207 ~ 5647190 (+)
G152125 NA other upstream 1262140 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 1348383 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 455296 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 525153 7339985 ~ 7356838 (+)
G152892 NA other downstream 1312433 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 1630588 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 1851638 8666470 ~ 8684765 (+)

Expression


Co-expression Network