LOC120575508


Basic Information

Item Value
gene id LOC120575508
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8073008 ~ 8073081 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641999.1
TTCAGTGATGAAAACCGCTGCATAGGAAGTGCCGTCTTATGCGATAACTGACGATTGCAATAGCTGTTCTGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641999.1 True 74 snoRNA 0.45 1 8073008 8073081

Neighbor

gene id symbol gene type direction distance location
LOC120574880 NA coding upstream 39993 8016996 ~ 8033015 (+)
grapa LOC103375418,LOC100690405,LOC101484535 coding upstream 60390 7975714 ~ 8012618 (+)
b9d1 b9d1 coding upstream 139551 7928919 ~ 7933457 (+)
atf7ip2 NA coding upstream 703128 7357503 ~ 7369880 (+)
socs1a socs1,LOC100174889 coding upstream 867798 7202748 ~ 7205210 (+)
LOC120574676 LOC100700674,LOC104966931,LOC106533983,LOC101072238,LOC103375364 coding downstream 29124 8102205 ~ 8112057 (+)
LOC120575181 LOC100708112,LOC103375341,LOC102791385,LOC101480711,LOC102216199 coding downstream 76272 8149353 ~ 8210405 (+)
LOC120574874 LOC108243002,LOC102310090,LOC106516502,LOC103375333 coding downstream 163061 8236142 ~ 8252307 (+)
pecam1 NA coding downstream 345760 8418841 ~ 8428829 (+)
LOC120573853 LOC102215035,LOC103153318,LOC103469130,LOC106961933,LOC106906802 coding downstream 368107 8441188 ~ 8444379 (+)
G152801 NA non-coding upstream 100648 7972083 ~ 7972360 (+)
G152794 epn2,LOC104949517 non-coding upstream 129320 7942541 ~ 7943688 (+)
G152759 grin2a,LOC104966804,LOC102780805 non-coding upstream 497131 7569836 ~ 7575877 (+)
G152757 NA non-coding upstream 564311 7495552 ~ 7508697 (+)
G152749 NA non-coding upstream 701508 7371154 ~ 7371500 (+)
LOC120575520 NA non-coding downstream 155 8073236 ~ 8073305 (+)
G152823 NA non-coding downstream 15913 8088994 ~ 8092206 (+)
G152826 NA non-coding downstream 39305 8112386 ~ 8112614 (+)
G152916 NA non-coding downstream 180441 8253522 ~ 8254810 (+)
G152942 NA non-coding downstream 313435 8386516 ~ 8386743 (+)
emp2 emp2 other upstream 716170 7339985 ~ 7356838 (+)
dexi dexi,LOC107590611 other upstream 798397 7270128 ~ 7274611 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 2115691 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 2301141 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 2425818 5626207 ~ 5647190 (+)
G152892 NA other downstream 54184 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 372339 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 593389 8666470 ~ 8684765 (+)
ypel3 ypela,ypel3,LOC106600728,LOC103040367,LOC105012807,LOC104942727,LOC108411043,LOC103393221,LOC107686999 other downstream 623818 8696899 ~ 8701771 (+)
G153016 NA other downstream 684165 8757246 ~ 8762582 (+)

Expression


Co-expression Network