G167819


Basic Information

Item Value
gene id G167819
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 22821451 ~ 22821756 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227480
tatatatgtgtgtgtgtgtatttgtagcctACTTGGTGACCGTTCCTTTGAAGTGGTGGCTCCGACACTGTGAAACGTCCTTCCTAATGTCATACTGTGGTCTctgttgacattttttaaaagcagctgaagacttaTCTATTTGAACTGGCCATTTTGTCGAATGCATgtcgttttgtgtgtttttattttattgcttgttctttttactgtgtttttttgtcttattttttaacaattttactCGTGAAgcactgtttttttctgtaaaaggtgctatgttaaataaacgtattattattatag

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU227480 True 306 lncRNA 0.34 1 22821451 22821756

Neighbor

gene id symbol gene type direction distance location
LOC120544409 LOC103353295 coding upstream 5005 22766561 ~ 22816446 (+)
ltbp3 ltbp3 coding upstream 60903 22724441 ~ 22760548 (+)
si:ch1073-224n8.1 LOC103353299,LOC102794175 coding upstream 100159 22716718 ~ 22721292 (+)
klhl13 klhl13,LOC103475825,LOC106563441,LOC101069997,LOC104946894 coding upstream 121486 22660244 ~ 22699965 (+)
LOC120544485 LOC102796686,LOC101483903,LOC104935288,LOC100691539,LOC101070532,LOC103353305 coding upstream 247704 22567500 ~ 22573747 (+)
dpf2 LOC102792306,LOC100692623,LOC101478722,LOC102309385,LOC106916658,LOC106946331,LOC105929385,LOC103145678,LOC107089855 coding downstream 156 22821912 ~ 22831878 (+)
c2cd2l c2cd2l coding downstream 144297 22966053 ~ 22985834 (+)
LOC120544119 h2afx,LOC104950138,LOC106516344,LOC100693699,LOC107677420,LOC105929328 coding downstream 164707 22986463 ~ 22987142 (+)
phldb1a LOC103359647,LOC100697424,LOC101471609 coding downstream 169760 22991516 ~ 23020444 (+)
atf5a LOC103359643,LOC102303727,LOC102789144,LOC102193670 coding downstream 206081 23027837 ~ 23032964 (+)
G167818 NA non-coding upstream 2123 22816749 ~ 22819328 (+)
G167774 NA non-coding upstream 108648 22709101 ~ 22712803 (+)
G167717 NA non-coding upstream 358121 22460547 ~ 22463330 (+)
G167711 NA non-coding upstream 365699 22454219 ~ 22455752 (+)
G167670 spag7 non-coding upstream 369329 22449870 ~ 22452122 (+)
G167821 NA non-coding downstream 22281 22844037 ~ 22846278 (+)
G167833 NA non-coding downstream 49243 22870999 ~ 22875992 (+)
G167840 sipa1 non-coding downstream 73192 22894948 ~ 22912858 (+)
G167866 NA non-coding downstream 167159 22988915 ~ 22989139 (+)
G168025 LOC103372850,LOC100694101,LOC101466666,LOC102298186 non-coding downstream 524721 23346477 ~ 23349768 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 175625 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 399397 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 677252 22134507 ~ 22144199 (+)
sms sms other upstream 973353 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 1050697 21764201 ~ 21770754 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 1019777 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 1105586 23927342 ~ 23928481 (+)
gab3 NA other downstream 1588549 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 2164709 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 3017648 25839404 ~ 25846377 (+)

Expression


Co-expression Network