G167717


Basic Information

Item Value
gene id G167717
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 22460547 ~ 22463330 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227344
TCCTTTCAAAtggtttataaaaaaataaagagccAATCTAACAATCCATGTGCCTGCCAGGACAGAACAAAGCAAACACATCAGAACATTGCAATGTACATATTCATTTGTTGTTACAGAGCTGGATTAGCAGTTTGTTTTAGGACAAAAACTCTGACTCACTCACAAATTGGCAGagaacatttgaaaacacaccaaaaaaaaaaaaactggaaaatgaCAAAAGCAGTTATGAACTTAATATTGACAACAGTAAAACAAAATTTGCAAACTTATTTACATTGATCACTTACTAAAATAGAAAACTATCATCCATCCTTCTCCATCATCTCCTACTCTAGTATGCCAAATGCTGTAATTGAACCAGTCACAAAAAAGGAAGCTTTTTAGTCCCAGCCACTTACAATGAAAGGTTGTAGATGAGCGATGCTCAGTGCGCACACCAGTAAAGATATAGTCACAAAGACTAACTACCCATAAAATAGTTCGGCAGAGCTTCAATACAAACAGCCTATTAATATTTCAAATGGTAAAAAGTCATATGGAAATTTTACTAACAATCCATTTTCTACAAATGTAAATTTTTGTTCCGTCTTACAGAAGTTGATTTCAACTCAGGAGCTCGAAAGTGATTCTGATGCTGTTTGAATTAATGCCTGTCCAGTGGTGAAGATCAGACCACACAAAACAATGCATGTTTCGGATTTATACATCACTGAAGACGCTGTAGCAACTCTCTAATGACAGCCCTCTGCCTCATTGTAGACATTGTAAACAACATATAAAAAGGTAGGGCTATGGCTTAACtgtcattaaaaaatatacatttgatCACTGCATGCTACAGATTTACCTTACTAAACAGTCCTTGTGGTTTCTGTGCTAAATTATTGAGCTGAGCCAACACCTGGGTGTCAGCACAGCTTAAATGTGCCCCCTACCATTAGGATGGAGCATTGAAAAGGCTTAAAAAACCCAAGAAGTGATTTGTTGCTTCCTAAACAGTCCAAACTCTCAAGTAAAATTACACAGGCCTGAAGGTTTACATTCAAAAAGCCAAAACTGTTTTCTTGAAAATGTAGATATCtgatttttccattttttccatTTTAGCTGAGGTCAGGTTTGAGGTACCATATAAAGTACTCTTCCCAGTGCTAGTAGGCCTGAGTAAACTATGTACTTTCCCATGTCATAACAACCGATCTAATATTTGATGACATTCATCATGACAGTTTTTAAGGAACTgactgttaaaagaaaaaaaaaaaaaaaagacaagagacCTTGAAAACATGCTGGCTGGGCACTGGGTAAGCTTTCACTAGTTGTAGTTTAGTTTAGGCAGTTTACTGGATGGCTGttctgttttgtatgtttttggcTGTTTTCAGTGCACCTTTCTCATCGTGCATTATTGTCTTTATCACTCAGACAAGCCACTTTTCACTTCATAGCGTCTTAGGTTTGTGCAATTTAGGAGCTTTTCATACTGTCCATGGCAAAATGTGGACTTACAACATTTTCACAGCTCTGTAACATATTAAAGTTAAATCAGCTCTAAGGCctattttgcaaaaaaaaatgacaaaacaaactatATATTAGGGTTGGAAAATGGGACAGATATATCAGCTATACACAATCTATGGCTGATGTAATTTGTTTGGCTGTTTCAAATTCACCAAAATATTTGCGTTTATACGTCCACCACAACGGGATTCAAGGCTTCAAAAATGATGCAGATATGTAACCACAAAGAGCACAATTTCTATGTCATCAGTAATTGTAATGGAGCTGGCAATATGAGGCTTCATTCATAACCTGCATAGTGTCCTACACAGCATAAAGCACATCACCTGCACTCCAGTGTGGCTTTTTAAAAGACATCATGATCAGTATGATCCGTGTAATGGCTTTGGAATCCAGTGGTGTACTGCTGTTTTGCAAGTGCGACACACAGTTGGTCACATGGAGCTAATGTAGTGAACACACCATCAATCACCACTTAACGTGGATATGCTGGCCAATTGGAAAAAGTCTGCCCTATTGCCCAACCCTAATATGTAAACTTTATGTTGATGCGGTGGCACAGAACAGTTATGAAAACAAAGTTTTGAAAGTAAAGATATATGGCCAAAGATTTTCAAACACGTTATGGCCTTGCATCAAACTGGAGCATCATTAGCACTAGGATGGTCCAAGGAAAGAATCAGCTAAGCACCTCTTCTACAGTCTGGCCCAGCTATGATGTCCAGGTTAAACACTGTGGAGTCTGATCCAAGTTCACTCCATACTCTTTAAGAATTTGTAGTCACAGAGGATTCTGATAGATACCTCTTCTCGACACATCTCATCTTTACGAAATTGATTCCACTTTGGTCCGATTCTCATTTCTGAATTTCATCTTCAGCATCTGAAAAGCTGGAGTAACTGTTAAGGACAAAGATGATTCCTTGCAGTCCAGGGCAGCTGGCTGGCTTCTATGTATGGTGGTGGCTTAGGCTACTCACATTCAGTGATCTTCAAGGCAGGAGCGGTCATTTGTGAAATAAGTAGATTGGCCTCTGAAAACTCTTATTGAACACTTTGGGGCCCCAAGGTACTCCGAACTTGTGAAGCCCACCTCTGTTGTAAGGTACGATGAAAACTGGTCAGGTTTGAGGCGGATGCTGTGAAAGTTCCTGCTAATATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227344 True 2695 lncRNA 0.38 2 22460547 22463330

Neighbor

gene id symbol gene type direction distance location
xrra1 NA coding upstream 27960 22427339 ~ 22432587 (+)
ephb4a ephb4 coding upstream 79344 22341196 ~ 22381203 (+)
LOC120544364 dlg4,LOC102775934,LOC101463677,LOC107386432,LOC107093504 coding upstream 127222 22265010 ~ 22333325 (+)
si:dkey-251i10.1 LOC104931197,LOC103353321,LOC101464643,LOC102200398 coding upstream 245259 22212857 ~ 22215288 (+)
zgc:175280 slc7a1,LOC102202414 coding upstream 326728 22128250 ~ 22133819 (+)
LOC120543726 pak3,LOC103353309,LOC103475835,LOC103141826,LOC107093501 coding downstream 18245 22481575 ~ 22512174 (+)
LOC120544485 LOC102796686,LOC101483903,LOC104935288,LOC100691539,LOC101070532,LOC103353305 coding downstream 104170 22567500 ~ 22573747 (+)
klhl13 klhl13,LOC103475825,LOC106563441,LOC101069997,LOC104946894 coding downstream 196914 22660244 ~ 22699965 (+)
si:ch1073-224n8.1 LOC103353299,LOC102794175 coding downstream 253388 22716718 ~ 22721292 (+)
ltbp3 ltbp3 coding downstream 261111 22724441 ~ 22760548 (+)
G167711 NA non-coding upstream 4795 22454219 ~ 22455752 (+)
G167670 spag7 non-coding upstream 8425 22449870 ~ 22452122 (+)
G167651 NA non-coding upstream 233249 22218081 ~ 22227298 (+)
G167649 NA non-coding upstream 244083 22215533 ~ 22216464 (+)
G167569 atp6v1a,LOC106526133,LOC108236878,LOC100710668,LOC101468244 non-coding upstream 428907 22030297 ~ 22031640 (+)
G167774 NA non-coding downstream 245771 22709101 ~ 22712803 (+)
G167818 NA non-coding downstream 353419 22816749 ~ 22819328 (+)
G167819 NA non-coding downstream 358121 22821451 ~ 22821756 (+)
G167821 NA non-coding downstream 380707 22844037 ~ 22846278 (+)
G167833 NA non-coding downstream 407669 22870999 ~ 22875992 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 38493 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 316348 22134507 ~ 22144199 (+)
sms sms other upstream 612449 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 689793 21764201 ~ 21770754 (+)
dnajc18 dnajc18,LOC101477689,LOC100707186,LOC104924601 other upstream 739682 21713943 ~ 21720865 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other downstream 158063 22621393 ~ 22645826 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 1378203 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 1464012 23927342 ~ 23928481 (+)
gab3 NA other downstream 1946975 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 2523135 24986465 ~ 24989389 (+)

Expression


Co-expression Network