si:ch1073-224n8.1 (LOC103353299,LOC102794175)


Basic Information

Item Value
gene id si:ch1073-224n8.1
gene name LOC103353299,LOC102794175
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 22716718 ~ 22721292 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777985.1
GCCTCTCAGTACAAGACTACAGTCAGTGCAGTTCTGCTGAAAGGAGCTGAAATGGGTGAGTCGCTGCTGAGGGCCATTGTATCAAAGTGTTTGAACAATAATTCACGGGCTTGAATAACGCCGTTCAAGACCGTCAGCACGTTTCTCCCGCAGAGTCACAGTGGTTGCAAGAGCACGTCTTTTACCGACCGGCGCTGTTAGTTTTAAAGCTTACGTTAgcaggctaatgttagctagcggAGCCAGGCCCAGCATAGAGCCGCATATCAGAGTTGACTACATTGTTTTTGTCAGCGACGCCAGTTAAAACAGCAAATGGGGCAGATGTAATTGGTGCCAGTTCACTCATTGCTCTGACAAATTACAGCAACACAATTGGCATAATTAATCCAGTTCGTTAGAAGTTTGGACTGTATTTTAGTCTCATAGTTAGCGTAGCCTGTAAACGTTAGCTTAACGTTAACTGAATTAAAGCTAGATAACTGCATTAAAATCATGACTTCCAGGAGGACAGGCTATGCCGGCAGCATGGATTCCTCTCCCTCAAATAGCAGCAACAGCTCAGTCCACAGTGGAAATCGTAAGCAAAGTATAATCAACATTCCCGAAAGGACCGGGGTAGAGTCCTGTTATGATCGGAAAGCGGACAAGGCTGGATACGGAGCTTCGCAGGGCAGCGTGACCGTAACGTCGCTGAAATCACGTCTCGCCCCGACCATTCAAAGTGCCATGTCCGCTGCAGTTGACACTCTCCTGGGCGAAGTGGTGCTTGTGCTCAATGAGACTCAACAAGAGTTGCTACATAAGGAACAAGAGAATGAAAGACTCAAAGTGCGTCTGGAAGTGTCAGAGCGGGAGTTGAAGACTTTACAGGAGTGTCTGTGTAGTGCTCAGAAGCTCATAGACCAGCTTCAGATCTCATACACGGGCCCTCAGTCAATTAGTCAATCCGTTTTCGCCCCATCGCTGTCTTCCATGGCTTCAATGACTTCAGGCTTGGACCGGGACCACCAGAACGCCCGAAATGTGAATGGAGCCGGTGTTGACATGGGTCTCGGTGGCTCTGTGGATGATTCGCTTCATGGGTTTGAGCCCAGAGATGACTATAAAATGTGCCAGCTTTCAATCCAACCAGATGGCTCTGTGACTAACCACGCTCTGGAATCCTTTGCTTCCAACACATCTCATATGTGCTCAGATTCCAGCAGACCAGATGAGCGGCAGTCTCAGGGACCAGGTGGAGCATCCAGGTTTGAGATTAAACAAGAGCAGGGGCCCACTTCAGGCTCTGGCCAGCCCAGCAGGAAGGAGCCTGGGTTGCCTGATGACAACAGAGTCGATGATGGTGACCTTGGCTACGTTGAAGTCGGAGGGGAGGGAGGTTCCCAGCGTGCCTTTACTCACCCCATGCGTCACCAAAGACCTGTGCGAGAATGCGGTGGTGCGTTGCAACAGGGCGGACTTGATGGACAGAAACAGTTGGCTAGGACTGCTGTAGGCGGGAGAATGGACAGTGTCTCACCGGGCAGAGCAGAGGACTCTGCAGGACCTTCGGTCTGTGATACAGTAGGGGAGCCCTCTGGAGATCGGCCTCACCACTGCTTGGAGTGTGGAAAGACCTTCCGTCTGATCTCCAGCTTGAAGAAGCACATCCGCatccacactggagagaagccctATCCGTGTGGAGTCTGTGGTCGTCGCTTCCGCGAGTCAGGCGCGCTTAAAACCCACCTGCGCAtacacacaggtgagaagccatACTCTTGCTCAGAGTGTGGAAACTGCTTCCGCCACCTGGACGGTTTGCGCaaacacaggcgcacacacaccgGAGAGAAACCTTACGTGTGTGCCATCTGTGGGAAGCGCCTCAGCCGCCTGCAGCACCTCAAACACCACCAGCTCATCCACACCGGAGAGAGGCCGTGCTGCTGCCCCTTCTGCAACCGCAGCTTCAAGGAGCCCGCAGCGCTGCGGAAACACATCCGCACGCACCGGGAGGAAGGCGGTCACATGGGGATTGGTGCCAGTGACGACACGGACCCAGACGCCATGGATGACATTAACAACCTCCACCCAGCAGCTCCGTCCCCTCAGATGAGGTTTGGGGAGTGGGGAGCTGAGGAGGACGACAGCTCGGTTGTGGACTGTGTGTAGGGCATGATTAAAGGAGTAACTGTCTGTTGGTATTCTTACCACAAAACCTACTCcgggtaaataaataaataaaaatgtggaaaaaggtGTTTGTGTAGCTTATAAACACGATGGATAAGGTCATCTCTGTTCCATGCTGTTGAAGTGAAGAAAGGGGCTATATATAACCCTAGCATTGGAGCTTTGTTTATATAATTCTTTACACTCTTAGATGTAAAAAATAACGTTTAAAATGTTCGCTGTacaagtatttttatttttttttcctgcacatTCATCAAGCAGCAGCAATAGCTTAGAGGTTGTTCTTGGCACAGGGAGTTTGCTAGCTTCCTGGCaataatttgacaaaaaaaaaagtggacaaAAGCTGTTTCCTCACTTTAAAAATATAAGTGCCTTGAAAACAGGGtctgaaattaacttttttcgCCAAAGTGGCGGATGGCCTGATGATTTCACATGCCACTGCCAACAATTTACCTGCATTTGGCCGGTGATAGTTTCAGACGCTGGTGGAACGCTCACTCAACCATCAACTGagtcgctgctgctgctgttcaaGATAGTTCCCACCTGGATTTTAGTCAAgacaaactgtttattgtgacTCTGGCCgattagtcttttttttatatagttttacaCATTAGAGAGATTGGATTTGCTGTTGAATTATATTCAGCTACTAATTAGGCATGCTTTTGCcaacacactgagctgctcagATAGATAGAAATGGATCCACAGGGCTGGCTCATGCTTCGTGTGTGGACAGACTTGCAGGAGCACAGACCATGTGCATTGTGTAGTTGGGCATTAGAAACTGAACCTAATATCACAGTATTTTTGGTTCAACTCCTTGATATTATTTGTATTGCAGCCCTGTTGAGAATGATTCAAGTTTTTGATGGTGCATAATATAGGTCAGTcataaaagaaataatttatCTGTTTACTTATAGTCATTTGGTTTCTTCACCTAATCGATTTTAGTCGAGAAAAATTTGTGAAAATAGCTTTTTCAATAATTGTCCTGTTCCAAGTGGATGCACtcgcattgaaaaaaatctagTGTTTATGAAGGACCAAagcacatttgtgaatattgttGGAATGCCACAGATGTCGCCACTATTTCTAAGTAATAATTAATGACCACAAAAATCCCATGCTAGTGGAGTCGCAGTCTAGACCTGTAAGCTAAAAAgcatttacatttacactgttGCGAGTGTGTGTCTTCATGAAGCATGAACCAGTTTCACACTTGAGTCAACAGCGTCAAGCAGAAGCTATCTGTTTCAAGAATATCTAAATTTGAAGCGATCCATACTATGTGTTAAGTATTTGAAGAGGGCACAGTCTGTTGGCATCACTGCATGCACTCCGATCAACAGCGGAAACTTTACCGTTTGTCGAGTCTTTAttatcatctctctctctctctctctctcttatggaCCATATTTTAGCAttccatttttttgtttaagatGCTGCTACTGTATGTCTAGAAAGCCTTTTCTTTTCTGGACTTGTATTATTGTAACCAGACCGTCACTGGCAATTACTAGCGGACAGATTTTGGTGCTTGCATGTGCATATCTGCTCCTCCGTTGGCATTAATGCCTCCTGGCTGTTTCTGTACATATGTATGTAGTTTTAACCATTTTATCTGGATTAATGAGGGTTAACATTTGTGGAAAAGTTAATGTGcaacaacaatttaaaaaaacaaacaaaaaaaaacaacatgcttTGAAAGCATCAGTATGCTGACATGCAAtgtaattatatataatcttaCTATAACTCTTCCTGATGTGACACCACTGATGCATCAGGGTTAACAGCAGACCATTAATCTTTTCAGCCTTTTACGCTATACTCTGTAGGTCACTGGTGTCATTTACCGTATACTACTATAACAATCTCCATGTAACTATTCTATGTACATTTACAGGTCTAAGTCATTTCAAAAGGCacccaaaatgttaaatatttgtTACTGTATACCCAGAATACGATTTGCCATGGTAGTCTTGATCCCAGATAatcatatttattgttttttgtattcCATACAGAGGGGGCCTTTGCATGTAGGTTTAAACTGAAACGGCAGTATTACATGTGAAAAATTTAAAACCTCTTCTTTTAATTCGTCTGTGTTCAACACATATTGCCCAACATTCATCGTGTTACCAACTGTAAATGTTACTATATTAAAGGGCCTTGTTTATACTTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777985.1 True 4412 mRNA 0.45 2 22716718 22721292

Neighbor

gene id symbol gene type direction distance location
klhl13 klhl13,LOC103475825,LOC106563441,LOC101069997,LOC104946894 coding upstream 16753 22660244 ~ 22699965 (+)
LOC120544485 LOC102796686,LOC101483903,LOC104935288,LOC100691539,LOC101070532,LOC103353305 coding upstream 142971 22567500 ~ 22573747 (+)
LOC120543726 pak3,LOC103353309,LOC103475835,LOC103141826,LOC107093501 coding upstream 204544 22481575 ~ 22512174 (+)
xrra1 NA coding upstream 284131 22427339 ~ 22432587 (+)
ephb4a ephb4 coding upstream 335515 22341196 ~ 22381203 (+)
ltbp3 ltbp3 coding downstream 3149 22724441 ~ 22760548 (+)
LOC120544409 LOC103353295 coding downstream 45269 22766561 ~ 22816446 (+)
dpf2 LOC102792306,LOC100692623,LOC101478722,LOC102309385,LOC106916658,LOC106946331,LOC105929385,LOC103145678,LOC107089855 coding downstream 100620 22821912 ~ 22831878 (+)
c2cd2l c2cd2l coding downstream 244761 22966053 ~ 22985834 (+)
LOC120544119 h2afx,LOC104950138,LOC106516344,LOC100693699,LOC107677420,LOC105929328 coding downstream 265171 22986463 ~ 22987142 (+)
G167774 NA non-coding upstream 3915 22709101 ~ 22712803 (+)
G167717 NA non-coding upstream 253388 22460547 ~ 22463330 (+)
G167711 NA non-coding upstream 260966 22454219 ~ 22455752 (+)
G167670 spag7 non-coding upstream 264596 22449870 ~ 22452122 (+)
G167651 NA non-coding upstream 489420 22218081 ~ 22227298 (+)
G167818 NA non-coding downstream 95457 22816749 ~ 22819328 (+)
G167819 NA non-coding downstream 100159 22821451 ~ 22821756 (+)
G167821 NA non-coding downstream 122745 22844037 ~ 22846278 (+)
G167833 NA non-coding downstream 149707 22870999 ~ 22875992 (+)
G167840 sipa1 non-coding downstream 173656 22894948 ~ 22912858 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 70892 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 294664 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 572519 22134507 ~ 22144199 (+)
sms sms other upstream 868620 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 945964 21764201 ~ 21770754 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 1120241 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 1206050 23927342 ~ 23928481 (+)
gab3 NA other downstream 1689013 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 2265173 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 3118112 25839404 ~ 25846377 (+)

Expression


Co-expression Network