G168079 (LOC103370084,LOC104962946)


Basic Information

Item Value
gene id G168079
gene name LOC103370084,LOC104962946
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23428477 ~ 23430519 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227845
ACAACTATTAGTATACAAGAGTCAGCCCTTTCAGGCTTTCTCACTGACCGAGAACCACAACTCAAAATAGAACATGCCAAAAGGTTGTGCAACTTTTCATCAATTTCCTATTTATATGCAAAAACCTCAAGGGACCAATTTTGAAAATGCACTCGACTGTGGTCCTTTTGTAAGCTTTAGTAAAACAACAACTAAAGCTGCATTAGGTGAACGTATAGTAACTGCTACTACATACTGTACCTTAGCATCCACTTTTCTTTACATTATGTGTTCATTTTACATGTAACAAGAGTTTATACTTACACAGATAAGACTTTGCTGcaactttaatattaatgaacAAAACCCATGACTGCACATGCTCACAGATCAGTGTATGTGACTGAGGTGACACCGTGAATCAGAAGCGTTGGCCCCAAACTATTGGTCACTGCTTCCACCTGAGCCAAGTACTGCTGTGACTGGCTGCGGTGACCAGTGGGTCGAGGTAAATACAGGAAGCGAACAGTGGCTTGCGAGCTGTGCTCCATCAACATACTGTTCACCGCGGACAGGAAGTCCTCAGACAGAGCTTGTGTTGGCTCTGCAGGGAGCTCCCCATCTGGCTGAACGTGGTGCTGCACCACAGAGTCCCACGGAACGATCTTTATCGACGCCCTGATCCTCAGCTTCCTCAGCAACTCTCGGAACGTCTCTTCGTTAACCACCCAGCCCTGGTCGTTAGACTCAGTCTCCACATTCAGGAAGATTCTCATTCTTGCATGCCGCCATTTGCTGGACATGTTGAGGACGCAGGCCATCTGCAGCAGGAAGAGGCTGCACACATCCTCATAATCACGGCTGCCTGGCTGGAGCAGGTTAAGAGGCCACACATCTATTGTCCGTTCTGGCCCGTCCACCTTGCTATCTTTACCCTCTCCCTCTAACTGGAAGAAATAGCGGGCGAGGCACACGTTCTTGTTCATTTTAATGGCGTCAGAAATTATCCCTACGTACTCCTCTGGTGATAGCCAGCGTGGGCTCTCCACATGTCGGACTGGGGGAAAATGGGCCTGTAATGAAGGCAAATCAACCCCAAAATTATATTCGCCCTCACTCCCCCGACCAATGGAAGAGTCACAGAACGCAGAATCTTGTAGGAAGAAGTCCTCAGGAGTACAGCTGTCATAGAAACCCAAAATCAATGTGTTGGGCTTCATG

Function

NR:

description
PREDICTED: solute carrier family 12 member 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227845 True 1200 lncRNA 0.47 2 23428477 23430519

Neighbor

gene id symbol gene type direction distance location
hsd20b2 NA coding upstream 441 23422534 ~ 23428036 (+)
tm4sf21a LOC103395405,LOC106516367,LOC107386492 coding upstream 52046 23374065 ~ 23376431 (+)
LOC120543761 NA coding upstream 56095 23370140 ~ 23372382 (+)
slc25a35 slc25a35,LOC103372851 coding upstream 69439 23353970 ~ 23359038 (+)
sat2b sat2,LOC103475794,LOC105929353,LOC103372848 coding upstream 99276 23326351 ~ 23329201 (+)
gnb2 gnb2,LOC103370085,LOC105023919 coding downstream 10390 23440909 ~ 23449650 (+)
gltpd2b LOC103370088,LOC104968195 coding downstream 94600 23525119 ~ 23529833 (+)
mogat3b LOC108248268,LOC106535072,LOC100707401 coding downstream 147116 23577635 ~ 23583574 (+)
LOC120544605 NA coding downstream 182603 23613122 ~ 23614150 (+)
LOC120544078 NA coding downstream 193042 23623561 ~ 23624589 (+)
G168080 NA non-coding upstream 972 23427192 ~ 23427505 (+)
G168063 LOC101072794,LOC103372857 non-coding upstream 27986 23399605 ~ 23400491 (+)
G168025 LOC103372850,LOC100694101,LOC101466666,LOC102298186 non-coding upstream 78709 23346477 ~ 23349768 (+)
G167866 NA non-coding upstream 439338 22988915 ~ 22989139 (+)
G167840 sipa1 non-coding upstream 515619 22894948 ~ 22912858 (+)
G168110 atp1b2,LOC104937285,LOC107386508,LOC103475775,LOC103145631,LOC101071453 non-coding downstream 104677 23535196 ~ 23542155 (+)
G168114 nyap1,LOC102779388,LOC103370091,LOC102290993,LOC101485015 non-coding downstream 117088 23547607 ~ 23550070 (+)
G168120 NA non-coding downstream 155192 23585711 ~ 23586404 (+)
G168122 NA non-coding downstream 162063 23592582 ~ 23593911 (+)
G168144 rnf167,LOC102777964,LOC102289272 non-coding downstream 165896 23596415 ~ 23601849 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 782651 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 1006423 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 1284278 22134507 ~ 22144199 (+)
sms sms other upstream 1580379 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 1657723 21764201 ~ 21770754 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 411014 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 496823 23927342 ~ 23928481 (+)
gab3 NA other downstream 979786 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 1555946 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 2408885 25839404 ~ 25846377 (+)

Expression


Co-expression Network