LOC120544605


Basic Information

Item Value
gene id LOC120544605
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23613122 ~ 23614150 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778478.1
ATGCTTTTAAATATGAATTTCTCTGAAGTGACATATTTTTATCTATCTGATTACAATGAAATGGAGGGCTTTAAGCCATTGTACTTCTGCATCTTTTTGATTATATACATAACTATTGTTGCTGAAAATGTTGTGTTAATAGGACTGGTCTATTCTGAAAAAAACCTGCATGAACCAATGTATTTTTTGCTGTGTAACTTGGCTGTGAATGGCCTGTATGGAAGCACTGCCTTACTGCCAGCCGTACTGAGCAACCTGCTGTCACACTCATATGAGATATCTTTACCATTTTGTCAGACACAGATCTATGCCTTACACACGTATGCCATCACTGAATTCACAATTCTAGCAGCTATGAGTTATGACAGGTATGTGGCCATTTGCTATCCACTGCTTTATCATTCAATCATGTCACAGAGAGTTGTTAAACTTATTGCTTTTACGTGGCTATACCCCATGCTGgcatttgtcattgttttaattttcactCTTCGGCTGCGGTTTTGTGGGAGAACCATAGATAAGGTGTATTGTATGAATTACTCGCTGGTGAAACTTGCCTGTACAGATACATCTCTTGTTAACATAGTTGGCCTGCTATCTGTAGTTCTATATACACTTCCACAGATCATCATGATCTGTTATTCATATGCACACATCCTGAGGATATGTGTACTGTCATTCAGCAAATCCAAGCTCAAAGCCCTTCGGACTTGCACCCCACACCTGATTGCAATAACAAACTACTCTATCGGGTGCTTTTTTGAAATAGCACAAAGTCGCTTCAACATTAGTCACCTGCCTTACCAAATCAAGTTGTTTTTATCTCTGTACTGTTTGATATTCCCACCCATTCTAAATCCGTTGATCTACGGTTTGAGTATTCAAATCATAAGGACACGACTGTTTAGGCTTTTTCGCAGAAAAAGCGGGCAAGTAAATAATGTTGCCAAGAGGGCTGTTGttatggtgcattcaaagtgtGTTCTGCATGGCGCTCGGAGGACTGATGCCTCTGGAAACACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778478.1 True 1029 mRNA 0.40 1 23613122 23614150

Neighbor

gene id symbol gene type direction distance location
mogat3b LOC108248268,LOC106535072,LOC100707401 coding upstream 29548 23577635 ~ 23583574 (+)
gltpd2b LOC103370088,LOC104968195 coding upstream 83289 23525119 ~ 23529833 (+)
gnb2 gnb2,LOC103370085,LOC105023919 coding upstream 163472 23440909 ~ 23449650 (+)
hsd20b2 NA coding upstream 185086 23422534 ~ 23428036 (+)
tm4sf21a LOC103395405,LOC106516367,LOC107386492 coding upstream 236691 23374065 ~ 23376431 (+)
LOC120544078 NA coding downstream 9411 23623561 ~ 23624589 (+)
nlrc3l1 NA coding downstream 45279 23659429 ~ 23665471 (+)
LOC120544654 LOC100694900,LOC107098236,LOC101481005,LOC102776621 coding downstream 65937 23680087 ~ 23685532 (+)
LOC120544660 lpar6,LOC104954664,LOC103367244 coding downstream 89679 23703829 ~ 23705960 (+)
LOC120544661 LOC103367246,LOC104954666 coding downstream 93721 23707871 ~ 23710435 (+)
G168144 rnf167,LOC102777964,LOC102289272 non-coding upstream 11273 23596415 ~ 23601849 (+)
G168122 NA non-coding upstream 19211 23592582 ~ 23593911 (+)
G168120 NA non-coding upstream 26718 23585711 ~ 23586404 (+)
G168114 nyap1,LOC102779388,LOC103370091,LOC102290993,LOC101485015 non-coding upstream 63052 23547607 ~ 23550070 (+)
G168110 atp1b2,LOC104937285,LOC107386508,LOC103475775,LOC103145631,LOC101071453 non-coding upstream 70967 23535196 ~ 23542155 (+)
G168150 NA non-coding downstream 2084 23616234 ~ 23627798 (+)
G168168 NA non-coding downstream 60187 23674337 ~ 23737071 (+)
G168192 NA non-coding downstream 112367 23726517 ~ 23728733 (+)
G168195 NA non-coding downstream 127981 23742131 ~ 23743363 (+)
G168205 fam76b non-coding downstream 141893 23756043 ~ 23760239 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 967296 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 1191068 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 1468923 22134507 ~ 22144199 (+)
sms sms other upstream 1765024 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 1842368 21764201 ~ 21770754 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 227383 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 313192 23927342 ~ 23928481 (+)
gab3 NA other downstream 796155 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 1372315 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 2225254 25839404 ~ 25846377 (+)

Expression


Co-expression Network