G168110 (atp1b2,LOC104937285,LOC107386508,LOC103475775,LOC103145631,LOC101071453)


Basic Information

Item Value
gene id G168110
gene name atp1b2,LOC104937285,LOC107386508,LOC103475775,LOC103145631,LOC101071453
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23535196 ~ 23542155 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU227879
CCAGCACCATTCCCATTTCACTCTTATTGAATACACAGAGGAATAGAAAGTCATGTTTAAAATTGTAAGATATGTCAGACATAAAAGGCAAATGAATAACCAATGACTATAAATGTTAGCTTGATACTgactttcttatttttttactggGATAATCTTCCTAATTCCTTATCTCAGTCCCTCGATGTCTCCTAGCAACACTATCCCTTTCGCTTCCCTCTTTATCTTTCATACCCGATTCAGCTTGATGATGATGCATGGCTTGCCATCCTGGTATCCATAGTAACGATCATTGATTCCAGAGCATAGCTCCAGCATGGTACGGTTGAACTGACAGGAGCGCTTGGGGTTGTTCTTGACATCGCCGCTGTCCTCCTGCAGGAAGTACTGGTCTGGGACGCAATCGTTATTTTTCTCGGCCTGGACGGAGTTGTTGTAGGGTGCCAGGAACTTGTCCAGGGCTTGAGCGTACATGTCCCAGCTCTCAGTGTTCTCGATGTTATAGACAATCTCATAGGAGTCATCTGTTTTGGGTCTAATCACCATGCCTGGTGTGGAGAGCCTGTCTTGCCAGGTTGGTTTGTGGTCGTCCAAGGTCTGCAGCATGACATACATAGTGAGTGTAAACAAGCCGGCCAGGAAGATGTAGAAAACTAAATAGAAGAGAAGAATAAGACCCCAGCTGCTCGCCGTCCTGCCCAGGAACTCCCTCGTCCTCGGGTTCCATATATATTCCTTCCACCCGGTTTTTTCTCCATCCTTTGCCATTTTGTCATAAAAGTTTGGACCCCAAAGCTCTAACAAACGCGCCCTAATGCAATTAGCGCCGGGCTGAAACAATTAGCCAGAGAGCAGAAAGAGAGCTACTGTATGGCAAGAAGACAGATAATTAAAGGTCTACTTAAGCGCTCAGATGGACAAATGAATGGTAATGAAAGTAGAAACACTACTGGAGTCAATCTGATAACAGAGAGACGGATAGTAAGAGTAAGAGGTAGCAGTCCTACACTCCAGCACAGACCTAGTATCTGCCCTCCCCCCCAGCTCTTGTCTGCATGCCGCAGAGTTTTGATGAGTGGTGCAGAAATCTAGTGATACTG
>TU227880
TGATCTTTGCCAACTTTGTATTTCTTTGCACCACAGGTGACAAACGGAGCATGTCCATCCTTACTTGGCAGCATCCCAATCACCCGATTCAGCTTGATGATGATGCATGGCTTGCCATCCTGGTATCCATAGTAACGATCATTGATTCCAGAGCATAGCTCCAGCATGGTACGGTTGAACTGACAGGAGCGCTTGGGGTTGTTCTTGACATCGCCGCTGTCCTCCTGCAGGAAGTACTGGTCTGGGACGCAATCGTTATTTTTCTCGGCCTGGACGGAGTTGTTGTAGGGTGCCAGGAACTTGTCCAGGGCTTGAGCGTACATGTCCCAGCTCTCAGTGTTCTCGATGTTATAGACAATCTCATAGGAGTCATCTGTTTTGGGTCTAATCACCATGCCTGGTGTGGAGAGCCTGTCTTGCCAGGTTGGTTTGTGGTCGTCCAAGGTCTGCAGCATGACATACATAGTGAGTGTAAACAAGCCGGCCAGGAAGATGTAGAAAACTAAATAGAAGAGAAGAATAAGACctgcagacaaagagagaaaaaaagtgag

Function

symbol description
atp1b2 Enables ATPase activator activity; ATPase binding activity; and protein-macromolecule adaptor activity. Involved in several processes, including cellular monovalent inorganic cation homeostasis; ion transmembrane transport; and positive regulation of cation transmembrane transport. Located in apical plasma membrane; astrocyte projection; and lateral plasma membrane. Part of sodium:potassium-exchanging ATPase complex.

NR:

description
PREDICTED: sodium/potassium-transporting ATPase subunit beta-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227879 True 1100 lncRNA 0.46 4 23535559 23542155
TU227880 False 554 lncRNA 0.48 5 23535196 23536581

Neighbor

gene id symbol gene type direction distance location
gltpd2b LOC103370088,LOC104968195 coding upstream 5363 23525119 ~ 23529833 (+)
gnb2 gnb2,LOC103370085,LOC105023919 coding upstream 85546 23440909 ~ 23449650 (+)
hsd20b2 NA coding upstream 107160 23422534 ~ 23428036 (+)
tm4sf21a LOC103395405,LOC106516367,LOC107386492 coding upstream 158765 23374065 ~ 23376431 (+)
LOC120543761 NA coding upstream 162814 23370140 ~ 23372382 (+)
mogat3b LOC108248268,LOC106535072,LOC100707401 coding downstream 35480 23577635 ~ 23583574 (+)
LOC120544605 NA coding downstream 70967 23613122 ~ 23614150 (+)
LOC120544078 NA coding downstream 81406 23623561 ~ 23624589 (+)
nlrc3l1 NA coding downstream 117274 23659429 ~ 23665471 (+)
LOC120544654 LOC100694900,LOC107098236,LOC101481005,LOC102776621 coding downstream 137932 23680087 ~ 23685532 (+)
G168079 LOC103370084,LOC104962946 non-coding upstream 104677 23428477 ~ 23430519 (+)
G168080 NA non-coding upstream 107691 23427192 ~ 23427505 (+)
G168063 LOC101072794,LOC103372857 non-coding upstream 134705 23399605 ~ 23400491 (+)
G168025 LOC103372850,LOC100694101,LOC101466666,LOC102298186 non-coding upstream 185428 23346477 ~ 23349768 (+)
G167866 NA non-coding upstream 546057 22988915 ~ 22989139 (+)
G168114 nyap1,LOC102779388,LOC103370091,LOC102290993,LOC101485015 non-coding downstream 5452 23547607 ~ 23550070 (+)
G168120 NA non-coding downstream 43556 23585711 ~ 23586404 (+)
G168122 NA non-coding downstream 50427 23592582 ~ 23593911 (+)
G168144 rnf167,LOC102777964,LOC102289272 non-coding downstream 54260 23596415 ~ 23601849 (+)
G168150 NA non-coding downstream 74079 23616234 ~ 23627798 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 889370 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 1113142 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 1390997 22134507 ~ 22144199 (+)
sms sms other upstream 1687098 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 1764442 21764201 ~ 21770754 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 299378 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 385187 23927342 ~ 23928481 (+)
gab3 NA other downstream 868150 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 1444310 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 2297249 25839404 ~ 25846377 (+)

Expression


Co-expression Network