G168205 (fam76b)


Basic Information

Item Value
gene id G168205
gene name fam76b
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23756043 ~ 23760239 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU228020
taacaGTTTAGCCAgttttaatagttttaaaaCACTTGGTTtggaaaaaaagtacaaaagtgaTCCTGGACGCCACAGTATGAAACCAGCCCAATAATGCAAGGTGAtaggtgtgttcctttaaaaagcATCTTCTACAGACATGTTAATTTCAACTGGCCTTaccatacacatactgtactcaCTAAAACAGATACAAGCAATAGTTTAAATACAATTGGCTGACCCCAGTAATACATTTACAAGTGATTcttaaaaaactaattaaaaaggGAGGGAAAAGAAGAAGTCCGACCACAATGCCAACCGGTGTCTGGCAGTAAAATCATGCAGTATTACAATCGTTCCACTAAAGAGAAACAGCAAAGCACTACAGCTGTCACACAGTGAGAAAGAGGGCAGCCAAGAGGTGTCTCTCTGTCAGACAGCCTTTTAAAGTGTTCATTGGTTGTTGTATGAATTGTTACTGAGTGGGTGGTCTACTGTTGAGCAGTAGCTCAGTGGTCACCCTTCCCACATTTGCATACATTGTAAAGTTGCGCAGGATCTCCATTAAGGAGAACTTGTCTTCCACAATCACATAAATTTAGAAAAATATAACTAATTGCTATTGAAGAAAACCCCAAAATGTGGGATATTCTCTTAGTATGTTGTGAGGAAATAAAAAAGCTAAGAAATACAgttgaataaataaattgcatgACATCCATAAAAATTAGGTGGATACATTAAGTTGACAGAATGCAATCCACATATGCACACCATGCTTTTTGTTTTGGCCCGGCAGTGTTAAAAATGAGGGCTCCATCCTCCACTCCTTTTAAAGTCACATCCTATGAACCAGTGGAAAAGTCACCataaaatatctaaaatatGCTGACATTTAGAGAAAGGTGTCTTTGATTCAACAATTGATTTCCATGTACAACATGGTCTCTAACGTTACCAATTGAGAAGTAATTGATGTTGATGGCAATGAGGAAACACAGGAGGGAGACTTTCACAGTGTTACAACAATGAAGCCACTGTGTTGTTACCCGTTGGCCGGCCTATTGTTAGGGCAACAGCAGTGAACTTCCTGTCCGGTCAAACTTTTTTCCTTTAGAGAGGGCAGCCACTTGTTTCATCAACTCCCTGTTCTTGCcCTGCTGTTGCTCCATAGACTCTTTGTGTGCTTTCTCCATTTGGTTCATCTTAACTCTCATGTTGGATTCCTGGTACTGAAAGTCTGCTTTGAGCTCTGTGAGCTTTCGGTCCTTCTCGAGAATGGTTTGATCCCTTTGCTGCAGAAGTCTCTtcagtgacatcacttcctctttcagcTGGCTGATAAGAATGAAGTTGTCTGTTCCTCCAGAATCCATCGACTGGGTGATGGAACTACTGTCCCCATTGGATGGCTTCATCTCCAGTTTTGGTTTCTTCTTTGGAGTCTCCTTCTGGATTGAAGACGATTTATGGCTGCAAAGAAAATCAAAATGGCAATGTACAACGTTGGGCCTAAAAACGCAATCAATACATTGTTTTCTGATATACATACATTATGCAGGTCAAATGAGAAGGAAGGTTTTACCTCTGCTTCCACAGTCCCTGCTCCTGCTCAGGACTCAAGCTCCCACTTAGTCTGAGAAAGATAAGTTAGCGGTCAGTTGACTAGATCCAATTTTCTGCTTTTCATTGCTTCATGTAAAGAAGCATACAATTAGGGCTGGGGCGATAACCGCATCGCCGCAGTGACGTGATGCTACTGCGGTGATGACATCATAACCGTCATCGCCGATATCGTCATTGACGGTCTTCTATCCTATGTTCAAGGGATTCTGGAGAAACAAAACTTAAGTTGCTCCTTACTTCAGCTTAGTTCTCAGCCAAGATGGACGGCATAGCGCTGCAGTGTTTTAACACTGCACTTACATGACATAAATTAGCCTAGCGGCCAGTGGAGTTTCCCTCTGCTCATAGCTCAATCCCGACAAAACACCATGTTGACTAACATTGTTAAAACAGAGCTGCTAGTATTGGCAGAGAGAGCAGCAAGTTAGCGGACTGCCGAGTCGCCCTCTCTTTGCTCAGCTGCTagcctgctgtgctgtggagccTCCGCTCTGGCAGTGTGTTAGGTGTTACCCTCGGCGAAACTTAACCGCCATACGGAGGTGATACATTGTTCTTCACCAcggtgagaaaaaaacattcatacCGTCAAAGCCCTACATATAATAGCATAAAACAGACACAAATCGTTTCTCTATTCTGTGACACAACAGAGGACATACTTGTGATTAGAgctgctgtgtctgtgttggtGGTGATGATGGTGAGGTCTGGAGTGGTGGTCTTTCTCGTTCAGAGAGGAGGAGTTGGAGGAGCCGAAGCCCTTCCTCTGCTCCTTGGTCTTCTGCAGGACACGGCGGTAGGACAGGGTACAGAGCCAGCAGAGCAGTTTCCCATCCACCTGTAAGAGAAGTAGGAGACAGTAGTTGATAAGACTTGGTGTTACACACTCACTGTCAAATtggactgtatgtgtgtaagacTTTTACCTTTCTCCTGCCTTCCTCCTTACGATCAAAAGCACATTGCTGTTTGCACTGCTCACATGTCTGTGGAGGTCCATATTTCTTCTCTGAGTTAGTACAACGCTGGCATTTTGTCCCAATAAAAGCTGCAATGATGTTACAGTACTGGCAGGGTTTGGGC

Function

symbol description
fam76b Predicted to be located in nuclear speck. Orthologous to human FAM76B (family with sequence similarity 76 member B).

NR:

description
protein FAM76B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228020 True 2700 lncRNA 0.43 4 23756043 23760239

Neighbor

gene id symbol gene type direction distance location
LOC120544379 NA coding upstream 21635 23731626 ~ 23734408 (+)
LOC120544661 LOC103367246,LOC104954666 coding upstream 45608 23707871 ~ 23710435 (+)
LOC120544660 lpar6,LOC104954664,LOC103367244 coding upstream 50083 23703829 ~ 23705960 (+)
LOC120544654 LOC100694900,LOC107098236,LOC101481005,LOC102776621 coding upstream 70511 23680087 ~ 23685532 (+)
nlrc3l1 NA coding upstream 90572 23659429 ~ 23665471 (+)
si:dkey-125i10.3 NA coding downstream 16655 23776894 ~ 23787623 (+)
cchcr1 NA coding downstream 56241 23816480 ~ 23826714 (+)
LOC120543788 NA coding downstream 222511 23982750 ~ 23985605 (+)
arhgap35b LOC103363264,LOC103395548 coding downstream 241748 24001987 ~ 24013170 (+)
pafah1b2 pafah1b2 coding downstream 340925 24101164 ~ 24106620 (+)
G168195 NA non-coding upstream 12680 23742131 ~ 23743363 (+)
G168168 NA non-coding upstream 18972 23674337 ~ 23737071 (+)
G168192 NA non-coding upstream 27310 23726517 ~ 23728733 (+)
G168150 NA non-coding upstream 128245 23616234 ~ 23627798 (+)
G168144 rnf167,LOC102777964,LOC102289272 non-coding upstream 154194 23596415 ~ 23601849 (+)
G168207 NA non-coding downstream 3262 23763501 ~ 23764132 (+)
G168217 NA non-coding downstream 30559 23790798 ~ 23798307 (+)
G168218 nlgn3b,LOC104954573,LOC103367236 non-coding downstream 40583 23800822 ~ 23802809 (+)
LOC120543877 NA non-coding downstream 185179 23945418 ~ 23949105 (+)
G168291 LOC104954468,LOC103363262 non-coding downstream 225443 23985682 ~ 23986537 (+)
zgc:163098 LOC103353302,LOC100691810,LOC102795692 other upstream 1110217 22621393 ~ 22645826 (+)
LOC120544391 LOC106960928,LOC103141750,LOC106923483,LOC103475842,LOC104941830,LOC102202980,LOC105919900,LOC100693698,LOC101158965,LOC101487699,LOC102291410 other upstream 1333989 22394516 ~ 22422054 (+)
kif20a kif20a,LOC102778170 other upstream 1611844 22134507 ~ 22144199 (+)
sms sms other upstream 1907945 21823653 ~ 21848098 (+)
LOC120544341 LOC108236972,LOC106514048,LOC103368261 other upstream 1985289 21764201 ~ 21770754 (+)
gria3a gria3,LOC103367234,LOC103395443,LOC102795589,LOC101486592 other downstream 81294 23841533 ~ 23918477 (+)
G168226 thoc2 other downstream 167103 23927342 ~ 23928481 (+)
gab3 NA other downstream 650066 24410305 ~ 24420345 (+)
LOC120544202 LOC104958513,LOC101062417,LOC108233857,LOC103359319 other downstream 1226226 24986465 ~ 24989389 (+)
LOC120575613 LOC103357740,LOC104968174 other downstream 2079165 25839404 ~ 25846377 (+)

Expression


Co-expression Network