G169209 (LOC107090330,LOC102785725,LOC102220786)


Basic Information

Item Value
gene id G169209
gene name LOC107090330,LOC102785725,LOC102220786
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27700118 ~ 27701522 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229468
GCCCCTGCAGAAATGACTACATCTATCTCTATACGTTTATCAAGCACACACCACTGGCCTATATAGCCCAACACAAACTATTCTTGCAAAGCTGTAACTTGAGAGTAGCAGGTCTTGTTACGGAATATGGAATGGAGAGCTGTCTCATGACTGATTACTGGGCATGTGCCCGGTGTCACAGAGCTCCATTCTCTGGGTCAGGGAAGGCGGAGAACCTTGGCCTTAGTAAATAGTCAACATCAGGAATCCAACTTTGAATTCGGATCTGTAAACATCGAGGAAAGCCATCAAGTCGACGAGCTCTTTGTTCTCCTGCGTTTAATTTCGCTGTTGTGATATTTTTCTGCTATCTTCCTCTCGTGTCCGGCGGGGGAATGGCGGTTTGTGTTCAGCTCGATTTCTTTCTTGGATCTCCCTTTGCCACAAGCATGGCACGAGTACTCGAGCATATTATAATAGTCATATTGATCGTAATGTGCCTCCTCGAAAGAAACAAATCTTTCCATGTCTGTTATGGTCGCCATTTGGACACGGAATGCAGCCGTTTTTACCAGACGAGTCTGAGA

Function

NR:

description
PREDICTED: nuclear transcriptional regulator 1-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229468 True 566 lncRNA 0.46 2 27700118 27701522

Neighbor

gene id symbol gene type direction distance location
LOC120543630 myo19,LOC102784659 coding upstream 7859 27671519 ~ 27692259 (+)
si:ch211-283g2.1 LOC104963922,LOC107387056,LOC108233828,LOC100700598 coding upstream 63085 27630266 ~ 27637033 (+)
eral1 eral1,LOC102782944 coding upstream 106157 27586893 ~ 27593961 (+)
trpv1 NA coding upstream 151207 27531428 ~ 27548911 (+)
p2rx5 p2rx5 coding upstream 184229 27505157 ~ 27515889 (+)
vkorc1l1 vkorc1l1 coding downstream 635 27702157 ~ 27713055 (+)
hpda LOC102309211,LOC103363687,LOC101479635 coding downstream 221108 27922630 ~ 27929889 (+)
supt4h1 supt4h1 coding downstream 333725 28035247 ~ 28037627 (+)
LOC120544670 LOC103133326 coding downstream 459456 28160978 ~ 28175458 (+)
ywhag1 143g1,LOC101156793,LOC108233911,LOC107387033,LOC103041195,LOC103395178 coding downstream 477505 28179027 ~ 28197663 (+)
LOC120543667 NA non-coding upstream 222987 27476285 ~ 27477131 (+)
G169157 NA non-coding upstream 273796 27425153 ~ 27426322 (+)
G169095 ubb,ubc,LOC107553588 non-coding upstream 402341 27291945 ~ 27297777 (+)
G169060 NA non-coding upstream 618457 27038854 ~ 27081661 (+)
G169027 NA non-coding upstream 739479 26957695 ~ 26960639 (+)
G169215 NA non-coding downstream 11553 27713075 ~ 27713796 (+)
G169254 NA non-coding downstream 13873 27715395 ~ 27716931 (+)
G169294 LOC103363689 non-coding downstream 98922 27800444 ~ 27832402 (+)
G169342 NA non-coding downstream 345813 28047335 ~ 28047574 (+)
G169354 NA non-coding downstream 506141 28207663 ~ 28259294 (+)
shpk shpk,LOC102781293 other upstream 168803 27520031 ~ 27531315 (+)
G169042 stip1 other upstream 735078 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 1012855 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 1024323 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 1131618 26543796 ~ 26568500 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 1094990 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 1180212 28881734 ~ 28942332 (+)
G169789 map6 other downstream 2244352 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 2309811 30011333 ~ 30113690 (+)
G169814 NA other downstream 2427010 30128532 ~ 30128932 (+)

Expression


Co-expression Network