G169215


Basic Information

Item Value
gene id G169215
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27713075 ~ 27713796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229477
CAACAAAAACTGGGGTGAAAACATCcgcaaatctggaaacaaaaagcGCTTAACGGTCACGGTTAGGTGGATGAGTCTGAAGATGTGCTCGCCCTGCCATCTTCCGTCCTGTAATCCTGGTCGGGCGTGCAGTTCAGAGTTGTGTGGATTTCTCTGTTGGAAGTGGTGATTGTTTCATCCGAAGCCACCGACACAAGTCTTTTAAACAGAACTATGGGTTCTTTTCACCAAGTTTGCATAAAGGCACCCTCACTTTTCTTTCTCGTTTCTGTTGGGTTATTGTATGAAAAGCATTCCTGACCACCACACAAGTGGGATCCATAAAGACTTATGTGCCTAAAGGAGTGTTAAGGTGAAttacctttcttttcttttcatgttttggGTGGGGTGGGAGAGTAATGTTAACACCAGTTcatattgttttattgtcacaggTCCAAGGCTTTATTTTTATgatcacatttatttttattttttttgtaaatttaagCTACCAGTGAAGTGTTTCTCCCTCCCTGATAGTCTCACGAGGTAGCAAAGGCTGCTACACTGTGGTTGTCTGCTGAAGTGTAGAGTGGTCTGGTGGCAGAGGTAGTCTCTTCTCTTGCTGTTTGAATGCGTTAATGCTCATCTGGCTTTTGTTCACTGAACGGCCTGTATACTATTTGATGTCAACTGAACAGTAACGGTGATCTCGCCAAGCTGAGTTACAGTTCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229477 True 722 lncRNA 0.43 1 27713075 27713796

Neighbor

gene id symbol gene type direction distance location
vkorc1l1 vkorc1l1 coding upstream 20 27702157 ~ 27713055 (+)
LOC120543630 myo19,LOC102784659 coding upstream 20816 27671519 ~ 27692259 (+)
si:ch211-283g2.1 LOC104963922,LOC107387056,LOC108233828,LOC100700598 coding upstream 76042 27630266 ~ 27637033 (+)
eral1 eral1,LOC102782944 coding upstream 119114 27586893 ~ 27593961 (+)
trpv1 NA coding upstream 164164 27531428 ~ 27548911 (+)
hpda LOC102309211,LOC103363687,LOC101479635 coding downstream 208834 27922630 ~ 27929889 (+)
supt4h1 supt4h1 coding downstream 321451 28035247 ~ 28037627 (+)
LOC120544670 LOC103133326 coding downstream 447182 28160978 ~ 28175458 (+)
ywhag1 143g1,LOC101156793,LOC108233911,LOC107387033,LOC103041195,LOC103395178 coding downstream 465231 28179027 ~ 28197663 (+)
p2rx1 p2rx1 coding downstream 660694 28374490 ~ 28395450 (+)
G169209 LOC107090330,LOC102785725,LOC102220786 non-coding upstream 11553 27700118 ~ 27701522 (+)
LOC120543667 NA non-coding upstream 235944 27476285 ~ 27477131 (+)
G169157 NA non-coding upstream 286753 27425153 ~ 27426322 (+)
G169095 ubb,ubc,LOC107553588 non-coding upstream 415298 27291945 ~ 27297777 (+)
G169060 NA non-coding upstream 631414 27038854 ~ 27081661 (+)
G169254 NA non-coding downstream 1599 27715395 ~ 27716931 (+)
G169294 LOC103363689 non-coding downstream 86648 27800444 ~ 27832402 (+)
G169342 NA non-coding downstream 333539 28047335 ~ 28047574 (+)
G169354 NA non-coding downstream 493867 28207663 ~ 28259294 (+)
G169363 NA non-coding downstream 503520 28217316 ~ 28218837 (+)
shpk shpk,LOC102781293 other upstream 181760 27520031 ~ 27531315 (+)
G169042 stip1 other upstream 748035 26962206 ~ 26965040 (+)
banf1 banf1,LOC106523121,LOC104926323,LOC108233898 other upstream 1025812 26681536 ~ 26687263 (+)
esrra esrra,LOC103363365,LOC100707827,LOC104926321,LOC106534575 other upstream 1037280 26659358 ~ 26675795 (+)
LOC120544064 tmem164 other upstream 1144575 26543796 ~ 26568500 (+)
ftr82 LOC104966639,LOC103359483,LOC104933521,LOC108233798,LOC106511051 other downstream 1082716 28796512 ~ 28802885 (+)
LOC120544198 vmp1 other downstream 1167938 28881734 ~ 28942332 (+)
G169789 map6 other downstream 2232078 29945874 ~ 29971107 (+)
uvrag uvrag other downstream 2297537 30011333 ~ 30113690 (+)
G169814 NA other downstream 2414736 30128532 ~ 30128932 (+)

Expression


Co-expression Network