G179707


Basic Information

Item Value
gene id G179707
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 32272423 ~ 32332287 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU243368
tgtgtgtatgtgtgtgtgtgtctctgtgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctctgtgtctgtgtgtgtgtgtctatgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgactgtgtgtgtgtgtgtgtgtgagtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko04360 Axon guidance

RNA

RNA id representative length rna type GC content exon number start site end site
TU243368 True 327 lncRNA 0.50 3 32272423 32332287

Neighbor

gene id symbol gene type direction distance location
npy8ar LOC104936321,LOC100707308,LOC102193818,LOC105917043,LOC106524407 coding upstream 45817 32213732 ~ 32226606 (+)
LOC120545731 cox5b,LOC106567989,LOC106563057 coding upstream 172889 32089425 ~ 32099534 (+)
LOC120545730 cox5b,LOC106567989,LOC106563057 coding upstream 186508 32079161 ~ 32085915 (+)
LOC120545077 LOC106675582,LOC101480093,LOC106676976 coding upstream 302096 31969324 ~ 31970327 (+)
LOC120545689 LOC102797342 coding upstream 340168 31928596 ~ 31932255 (+)
fgfr1b LOC103372997,LOC106524404,LOC108231094,LOC103152302,LOC106947031,LOC102225656 coding downstream 586 32332873 ~ 32378068 (+)
LOC120545081 NA coding downstream 412249 32744536 ~ 32745879 (+)
LOC120545704 NA coding downstream 425927 32758214 ~ 32760074 (+)
LOC120545697 NA coding downstream 470819 32803106 ~ 32805329 (+)
psmb6 psmb6,LOC107372744,LOC103460825,LOC101466438 coding downstream 608123 32940410 ~ 32949424 (+)
G179687 NA non-coding upstream 17632 32250073 ~ 32254791 (+)
G179699 NA non-coding upstream 53734 32218199 ~ 32218689 (+)
G179652 NA non-coding upstream 194252 32072817 ~ 32078171 (+)
G179653 NA non-coding upstream 198703 32073168 ~ 32073720 (+)
G179644 NA non-coding upstream 255732 32016382 ~ 32016691 (+)
G179721 NA non-coding downstream 34160 32366447 ~ 32420471 (+)
LOC120545736 NA non-coding downstream 85534 32417821 ~ 32431554 (+)
LOC120545737 NA non-coding downstream 137261 32469548 ~ 32526687 (+)
G179789 NA non-coding downstream 195714 32528001 ~ 32528292 (+)
G179793 NA non-coding downstream 201403 32533690 ~ 32534547 (+)
G179655 cox5b,LOC106567989,LOC106563057 other upstream 172881 32079177 ~ 32099542 (+)
LOC120545711 NA other upstream 194413 32059925 ~ 32078010 (+)
LOC120544927 NA other upstream 440163 31811729 ~ 31832260 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other upstream 618840 31565245 ~ 31653583 (+)
G179407 NA other upstream 792329 31387747 ~ 31480094 (+)
LOC120545732 lage3,LOC103372999 other downstream 109723 32442010 ~ 32448815 (+)
LOC120545086 LOC100699756 other downstream 632674 32964961 ~ 32984052 (+)
mrps18c NA other downstream 771604 33103891 ~ 33109471 (+)
G179903 NA other downstream 782404 33114691 ~ 33187628 (+)
abraxas1 fam175a other downstream 857734 33190021 ~ 33197957 (+)

Expression


Co-expression Network