LOC120545699


Basic Information

Item Value
gene id LOC120545699
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33027615 ~ 33030317 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780252.1
CCCTCCCCTCCAGAGCCTCAGTTTGCATATGGGTGTAACCAACATGCTGGGGCAAGTACAACAGCGCATCACTGCTGTGTTTACATCAGAGCTCAGACTAGTTTCACTTCTCAGGAACGGAGACTCAGACGGTCGTTGTCACTGagcgagaggtgaaatggcgcagaaaAGAGTTAAGCTGGACCGGGAAgccttctcttgttccatctgtctgaatctactgaaggatccggtgactactccctgtggacacaactactgcatgaactgtattaaaagccactggGATGAAGAGGATCGTAAGAACAGCCACAGCTGTCCTCATTGCAGGAAGACGTTCACACAgaggcctgtcctgctgaaaaacaccatgttagcagatgtagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcaccgggagaaaactcaaagcaCACAAGTCCTGTCTGCAATGTCTGGCTTCTTACTGTGAGAAACACCTTCAGCCTCATTTTGAATCAGAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagatgttctgccgtactgatcagcagcttatctgttatctctgctctgtggatgaacataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctcgaggggagtcgacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggAGGCCATCGATCGCTCTgctgataaagcagtggaggacagcgagaagatcttcactgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtctagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagccgctgagctgaagaagctctcacacacagaggatcacacacagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatccgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggacgtcctgagagagaagaggacaaacgtctcactgacagggactgaagtggacgttttactgcaacaaccagagcccaagaccagatctggattcttaaaatattcacatgcaatcacactggatccaaacacagcaagCACACGActgttattatctgaggggaacaggaaagcaacatTCATGTTGCAACATCAGCCTTATTCAGTAATGAGAAAACAACAGTCTTATTCTAGTCATCCAGACATATTCACTAACCTgtctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtgaagaggagagggagaggagtttGGGTAGCAGTTgcatacaagaatatcagcagagcagggaGGTCGGATGAATGCGGATTTGAACGAAATGATAAATCTTGGGCGTTATAttgtaacaacaacaaatatacattttgttacaacaaagtccaaactcccgtctcaggtcctgagtcctccacagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGACTCTGGTTTGATTATTGGTCTCCTGGAgactctgctgagttgtgtaaactgaaatagacagaagtcatttaagggttaaattcagtgttttaactctttgacttatttagtctccatgtttgttgctgAGAGCTGATTGTTGTGATTTCTTCACTGCACAGAgatcagctgtcaatcaaacattatgggatgattttaacatcttttagtttagtttaaagaTTAGTTTTTGTGCACGGACCGATGTGTTGTTTAAATGATATAGAAAATTTGTTCCATTTGGTTTTCTACTGTCCTTTTATTTAGAACAGCGTGATGCTTTGTTTTAGTCAGATTAAAACAGATATTGATGTTGGAAATATGGACGATGCTTAAAGACTGAGACGGCTGTTCACATGTTATCTTGAGAAAGCCTGAGAGAAGAGAAATAAAGATCTTTACGGAGATGTAGATATTAGTTGTtgtttgttattcatgtatCTCTCCATGTTATGTATCTGCGGGACAGGAAGATGTCTGTTAAATAgcggtgtcttgtaatcccatgtgggacgggccaaatgtttggcgtgacccagaaataaaatcaatctaAAAGTGTATTTAGTTTCTCTTCCACTGCATGGctctgaagagagaaagcacCAGACCTCCTTTATCCTACACACTTTGTGGACATTGGTAAAGAAATCTAGATTTACAATTATTTGTTGGGCGGACCAAATGTTTTTATCATTACCCAGTGTTTCCGCTAGAATTATTTTCAGCTGTGGCAGGGTGTTGAACATCAAAAAGTAACGTAACCTGAAAACTGCgtgtagtttttctttttagcatctcacatcacactttCAGTCACCATGACCACTACAGTCAGAAACATTGTGCCATAATATGAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780252.1 True 2703 mRNA 0.45 1 33027615 33030317

Neighbor

gene id symbol gene type direction distance location
psmb6 psmb6,LOC107372744,LOC103460825,LOC101466438 coding upstream 78191 32940410 ~ 32949424 (+)
LOC120545697 NA coding upstream 222286 32803106 ~ 32805329 (+)
LOC120545704 NA coding upstream 267541 32758214 ~ 32760074 (+)
LOC120545081 NA coding upstream 281736 32744536 ~ 32745879 (+)
fgfr1b LOC103372997,LOC106524404,LOC108231094,LOC103152302,LOC106947031,LOC102225656 coding upstream 649547 32332873 ~ 32378068 (+)
LOC120545698 NA coding downstream 3533 33033850 ~ 33036232 (+)
LOC120545701 NA coding downstream 22595 33052912 ~ 33054884 (+)
LOC120545707 NA coding downstream 43047 33073364 ~ 33076139 (+)
LOC120545739 LOC106675582 coding downstream 240919 33271236 ~ 33273527 (+)
LOC120545741 NA coding downstream 291050 33321367 ~ 33325749 (+)
G179876 NA non-coding upstream 9163 33017455 ~ 33018452 (+)
G179873 helq non-coding upstream 16359 33009719 ~ 33011256 (+)
G179870 NA non-coding upstream 19262 33003214 ~ 33008353 (+)
G179863 NA non-coding upstream 89858 32937042 ~ 32937757 (+)
G179853 NA non-coding upstream 102373 32883780 ~ 32925242 (+)
G179897 helq non-coding downstream 63746 33094063 ~ 33096602 (+)
G179898 NA non-coding downstream 64108 33094425 ~ 33095752 (+)
G179904 NA non-coding downstream 100532 33130849 ~ 33131643 (+)
G179905 NA non-coding downstream 115629 33145946 ~ 33174119 (+)
G179910 NA non-coding downstream 158930 33189247 ~ 33189571 (+)
LOC120545086 LOC100699756 other upstream 43563 32964961 ~ 32984052 (+)
LOC120545732 lage3,LOC103372999 other upstream 578800 32442010 ~ 32448815 (+)
G179655 cox5b,LOC106567989,LOC106563057 other upstream 928073 32079177 ~ 32099542 (+)
LOC120545711 NA other upstream 949605 32059925 ~ 32078010 (+)
LOC120544927 NA other upstream 1195355 31811729 ~ 31832260 (+)
mrps18c NA other downstream 73574 33103891 ~ 33109471 (+)
G179903 NA other downstream 84374 33114691 ~ 33187628 (+)
abraxas1 fam175a other downstream 159704 33190021 ~ 33197957 (+)
G179997 LOC102306450 other downstream 240679 33270996 ~ 33324065 (+)
dmtn LOC102797496,LOC102303313,LOC101469122,LOC102075582 other downstream 678408 33708725 ~ 33745193 (+)

Expression


Co-expression Network