LOC120545701


Basic Information

Item Value
gene id LOC120545701
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 33052912 ~ 33054884 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780253.1
CTTTCACTTCTCAGGAACGGAGACTCAGACGGTCATTGTCACTGagcgagaggtgaaatggcgcagaaaAGAGTTAAGCTGGACCGGGAAgccttctcttgttccatctgtctgaatctactgaaggatccggtgactactccctgtggacacagctactgcatgaactgtattaaaagccactggGATGAAGAGGATCGTAAGAACAGCCACAGCTGTCCTCAGTGCAGGAAGACGTTCACACTgaggcctgtcctgctgaaaaacaccatgttagcagatttagtgaaggagctgaagaagactagactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcaccgggagaaaactcaaagcaCACAAGTCCTGTCTGCAATGTCTGGCTTCTTTCTGTGATAAACACCTTCAGCCTCATTTAGAATCAGAGACAttcaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgaagatgttctgccgtactgatcagcagcttatctgttatctctgctctgtggatgaacataaaggccacgacacagtctcagctgcagcagagagagccgagaggcagagagagctcgaggggagtcgaaaaaacatccagcagagaatccaggacagaaagaaagatgtgaagctgcttcaacagcaggcggAGGCCATCGATCGCTCTGCTGATAAAGCAGTGAAGGACAGCGAGAAGATCTTCACtgagctgatccgtctcctggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaaggcgctgagctgaagaagctctcacacacagaggatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatcagcatccagcatccatatccgtcctctgagctgctttgaggaAGTGACAGCAGccgtgtcagaagtcagagataaactacaggacgtcctgagagagaagaggacaaacgtctcactgacagggactgaagtggacgttttactgcaacaaccagagcccaagaccagagctggattcttaaaatattcacatgcaatcacactggatccaaacacagcaagCACACGgctgttattatctgaggggaacaggaaagcaacatTCATGTTGCAACATCAGCCTTATTCGGTAATGAGAAAACAACAGTCTTATTCTAGCCATCCAGACATATTCACTGAGTGGTggcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagaggagagggagaggagttgtagcagtcgcatacaagaatatcagcagagcagggaGGTCGGATGAATGCGGATTTGGACGAAATGATAAATCTTGGGCGTTACATTATAACAACAACGGTTATACATTTTGTTACAACAAAGTCCGAACTCCCATCTCATGTCCTgtgtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGACTTTGGTTTGATTATTGGTCTCCTGGAgactctgctgagttgtgtaaactgaaatagacagaagtcatttaagggttaaattctgtgttttaactctttgacttatttagtctccatgtttgttgctgAGAGCTGATAGTTGTGGGGTTTCTTCACTGCACAGTGATCAGTAGAGGTGTTAAGttggatttctgtgtgtttgcttcacTGAAGATAATATCCTGCTGCACGTCCACATACCATCAGGCCCGCaacgtttcttttttctttctctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780253.1 True 1973 mRNA 0.48 1 33052912 33054884

Neighbor

gene id symbol gene type direction distance location
LOC120545698 NA coding upstream 16680 33033850 ~ 33036232 (+)
LOC120545699 NA coding upstream 22595 33027615 ~ 33030317 (+)
psmb6 psmb6,LOC107372744,LOC103460825,LOC101466438 coding upstream 103488 32940410 ~ 32949424 (+)
LOC120545697 NA coding upstream 247583 32803106 ~ 32805329 (+)
LOC120545704 NA coding upstream 292838 32758214 ~ 32760074 (+)
LOC120545707 NA coding downstream 18480 33073364 ~ 33076139 (+)
LOC120545739 LOC106675582 coding downstream 216352 33271236 ~ 33273527 (+)
LOC120545741 NA coding downstream 266483 33321367 ~ 33325749 (+)
LOC120545637 LOC106675582 coding downstream 510470 33565354 ~ 33567283 (+)
xpo7 xpo7 coding downstream 561153 33616037 ~ 33656759 (+)
G179876 NA non-coding upstream 34460 33017455 ~ 33018452 (+)
G179873 helq non-coding upstream 41656 33009719 ~ 33011256 (+)
G179870 NA non-coding upstream 44559 33003214 ~ 33008353 (+)
G179863 NA non-coding upstream 115155 32937042 ~ 32937757 (+)
G179853 NA non-coding upstream 127670 32883780 ~ 32925242 (+)
G179897 helq non-coding downstream 39179 33094063 ~ 33096602 (+)
G179898 NA non-coding downstream 39541 33094425 ~ 33095752 (+)
G179904 NA non-coding downstream 75965 33130849 ~ 33131643 (+)
G179905 NA non-coding downstream 91062 33145946 ~ 33174119 (+)
G179910 NA non-coding downstream 134363 33189247 ~ 33189571 (+)
LOC120545086 LOC100699756 other upstream 68860 32964961 ~ 32984052 (+)
LOC120545732 lage3,LOC103372999 other upstream 604097 32442010 ~ 32448815 (+)
G179655 cox5b,LOC106567989,LOC106563057 other upstream 953370 32079177 ~ 32099542 (+)
LOC120545711 NA other upstream 974902 32059925 ~ 32078010 (+)
LOC120544927 NA other upstream 1220652 31811729 ~ 31832260 (+)
mrps18c NA other downstream 49007 33103891 ~ 33109471 (+)
G179903 NA other downstream 59807 33114691 ~ 33187628 (+)
abraxas1 fam175a other downstream 135137 33190021 ~ 33197957 (+)
G179997 LOC102306450 other downstream 216112 33270996 ~ 33324065 (+)
dmtn LOC102797496,LOC102303313,LOC101469122,LOC102075582 other downstream 653841 33708725 ~ 33745193 (+)

Expression


Co-expression Network