LOC120549545


Basic Information

Item Value
gene id LOC120549545
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 7501963 ~ 7505062 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637402.1
GTTGTCATAGTGTTTGAGACAGTTTGGAAGAGAGCGACTTTTATGTGCAACGCGTGCGAAATTCAGGATGCAAAAGATACCATTGACAGTCTGCACGTGAACAAGAACTGCAAGATTTGCTGACCTCAAAGTAATCTGAAGAGGAAGCTCTCCTTTGGCAGCAGAGTACTTCATGCTTTCTGTGGACCCGACCATTGTGAATGGTCACATCAGTGCCTTCACCGATGCTCTTGTGTTGATGTTTGCCAATATTGGAGTTCTTGCAGAGATGCCTCAAGATCAACCCAGACAAGGGATCAAGAGTGGAGAACAATGCTACCAGAAAGCAGCTGGCGGTCAGTCCAAAGGTTCTTTCCCTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637402.1 True 361 lncRNA 0.46 4 7501963 7505062

Neighbor

gene id symbol gene type direction distance location
letm1 letm1,LOC104955635 coding upstream 250829 7220316 ~ 7251134 (+)
jade1 NA coding upstream 312896 7173023 ~ 7189067 (+)
asmt2 asmt,LOC103354763,LOC100692897,LOC102199344,LOC102295279,LOC101473716 coding upstream 330107 7159488 ~ 7171856 (+)
pgrmc2 pgrmc2 coding upstream 348137 7141282 ~ 7153826 (+)
larp1b LOC103354752 coding upstream 361980 7098440 ~ 7139983 (+)
LOC120548890 NA coding downstream 145880 7650942 ~ 7653352 (+)
LOC120549849 NA coding downstream 150053 7655115 ~ 7658242 (+)
LOC120549851 NA coding downstream 181383 7686445 ~ 7689502 (+)
LOC120549634 NA coding downstream 191872 7696934 ~ 7702694 (+)
LOC120549654 NA coding downstream 207988 7713050 ~ 7736949 (+)
G200717 NA non-coding upstream 157961 7338346 ~ 7344002 (+)
G200704 NA non-coding upstream 240178 7261397 ~ 7261785 (+)
G200618 NA non-coding upstream 307329 7192571 ~ 7194634 (+)
G200615 NA non-coding upstream 330107 7096936 ~ 7171856 (+)
G200626 NA non-coding upstream 372841 7128175 ~ 7129122 (+)
LOC120549853 NA non-coding downstream 154970 7660032 ~ 7661245 (+)
LOC120549854 NA non-coding downstream 156201 7661263 ~ 7663560 (+)
LOC120548816 NA non-coding downstream 272873 7777935 ~ 7779509 (+)
G200821 NA non-coding downstream 331585 7836647 ~ 7836954 (+)
G200831 NA non-coding downstream 393486 7898548 ~ 7898779 (+)
LOC120550068 NA other upstream 601619 6900139 ~ 6900344 (+)
LOC120549783 NA other upstream 733301 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 754561 6732248 ~ 6747402 (+)
G200492 NA other upstream 819372 6677658 ~ 6682591 (+)
G200452 NA other upstream 930206 6568276 ~ 6571757 (+)
G201057 dcaf10,LOC102795877 other downstream 1715579 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 2086108 9591170 ~ 9604625 (+)
G201287 NA other downstream 2203802 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 2430674 9935736 ~ 10007687 (+)
LOC120549492 NA other downstream 2536963 10042025 ~ 10044094 (+)

Expression


Co-expression Network