LOC120549851


Basic Information

Item Value
gene id LOC120549851
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 7686445 ~ 7689502 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039787024.1
AAATAGGCTGCAGGTCGCCACTACTCTTACTGATAGATGAAGAACTGAAGAGATGGCTCCAACAAGGATTGATGCAAAGCCCGGTGACCTGATCGAGATCGACCGTGGGATTTATCAGCACTGGGCCATCTACATCGGTGGAATGGAAGTTGTTCATTTGACTACTCCAAATGGTGATATTGCCCTGGAGACCATAGGAAAGGTGAAGCGTGAGAAAATCTGGAAAGTGGTCGGCAATGATAGATTCAAGATCAACAACCTCCTAGATGATAAGTACCAGCCTCGTGAGCGTGACATCATCGTGAAGGAGGCCTGTAGCATGGTGGGTCTGAAGATGCGGTACTCTATCGTGAATAGCAACTGCGAGCACTTTGTCACAGACCTACGATACGGCATTCCAGAGTCTCGACAGGTTACCACAGCAGCTGCGATTGGAGGGGCAGTTGTAGTAGGTGTAGGGATTGTAGCTATTGGAGCTCTGCTCGCATCCTGGCTCAAAGATGacaacaaagaagaaaagagagaagaaagaagagaaccAAGGAGAGAACCAAGGAGACATTACAATTGGCAGCAATGAGACAGCAAGATGAAAGGAAAGATCCTGCCATTGTTCGAGTCAATTCACCTGGCAGTGATTATGATTTAAACATTGCGAATAAACTATTGTCTTTGTTGTGTATTGCTATcaacatacacacgcacacacacatacacacaatatatatataactttggATAAGATTAGGCAAGCTTTTGTGGAGAAAAATGAAGTTATAGGTAAATCCATGACTGTTATGTTTGATATTAGTGCTGTTGGGTAGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039787024.1 True 829 mRNA 0.44 4 7686445 7689502

Neighbor

gene id symbol gene type direction distance location
LOC120549849 NA coding upstream 28203 7655115 ~ 7658242 (+)
LOC120548890 NA coding upstream 33093 7650942 ~ 7653352 (+)
letm1 letm1,LOC104955635 coding upstream 435311 7220316 ~ 7251134 (+)
jade1 NA coding upstream 497378 7173023 ~ 7189067 (+)
asmt2 asmt,LOC103354763,LOC100692897,LOC102199344,LOC102295279,LOC101473716 coding upstream 514589 7159488 ~ 7171856 (+)
LOC120549634 NA coding downstream 7432 7696934 ~ 7702694 (+)
LOC120549654 NA coding downstream 23548 7713050 ~ 7736949 (+)
LOC120548892 NA coding downstream 54195 7743697 ~ 7745044 (+)
LOC120549656 NA coding downstream 61143 7750645 ~ 7755085 (+)
LOC120548893 NA coding downstream 75302 7764804 ~ 7772359 (+)
LOC120549854 NA non-coding upstream 22885 7661263 ~ 7663560 (+)
LOC120549853 NA non-coding upstream 25200 7660032 ~ 7661245 (+)
LOC120549545 NA non-coding upstream 181383 7501963 ~ 7505062 (+)
G200717 NA non-coding upstream 342443 7338346 ~ 7344002 (+)
G200704 NA non-coding upstream 424660 7261397 ~ 7261785 (+)
LOC120548816 NA non-coding downstream 88433 7777935 ~ 7779509 (+)
G200821 NA non-coding downstream 147145 7836647 ~ 7836954 (+)
G200831 NA non-coding downstream 209046 7898548 ~ 7898779 (+)
LOC120549436 NA non-coding downstream 658578 8348080 ~ 8357752 (+)
G200871 NA non-coding downstream 896573 8586075 ~ 8586414 (+)
LOC120550068 NA other upstream 786101 6900139 ~ 6900344 (+)
LOC120549783 NA other upstream 917783 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 939043 6732248 ~ 6747402 (+)
G200492 NA other upstream 1003854 6677658 ~ 6682591 (+)
G200452 NA other upstream 1114688 6568276 ~ 6571757 (+)
G201057 dcaf10,LOC102795877 other downstream 1531139 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 1901668 9591170 ~ 9604625 (+)
G201287 NA other downstream 2019362 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 2246234 9935736 ~ 10007687 (+)
LOC120549492 NA other downstream 2352523 10042025 ~ 10044094 (+)

Expression


Co-expression Network