LOC120548892


Basic Information

Item Value
gene id LOC120548892
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 7743697 ~ 7745044 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785403.1
ATGCTCGTACACATGGTTGATGCAAAGCCCAGAGACCTGATTGAAATCTCCCGTGGGATATATAATCACTGGGCCATCTACATCGGTGGAGAGGAAGTTGTTAATTTCGCTCCTCCAAATGGTGATATTGCCTGGAAAAGCCCCAAAGAACAGGTGAAGCGTGAGAAGATCTGGGAAGTGGTCGGCAACGATAGTTTCAAGATCAACAACCTCCTAGATAACAAGTACCAGCCTCGTGAGCGTGACATCATCGTGAAGGAGGCCTGTAGCATGGTGGGTCTGAAGATGCCGTACTCTATCGTGAAATACAACTGCGAGCACTTTGTCACAGAACTACGATACGGCATTCCAGAGTCTCGACAGGACAAATGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785403.1 True 375 mRNA 0.48 4 7743697 7745044

Neighbor

gene id symbol gene type direction distance location
LOC120549654 NA coding upstream 6748 7713050 ~ 7736949 (+)
LOC120549634 NA coding upstream 41003 7696934 ~ 7702694 (+)
LOC120549851 NA coding upstream 54195 7686445 ~ 7689502 (+)
LOC120549849 NA coding upstream 85455 7655115 ~ 7658242 (+)
LOC120548890 NA coding upstream 90345 7650942 ~ 7653352 (+)
LOC120549656 NA coding downstream 5601 7750645 ~ 7755085 (+)
LOC120548893 NA coding downstream 19760 7764804 ~ 7772359 (+)
LOC120549761 NA coding downstream 37375 7782419 ~ 7791256 (+)
foxi2 foxi3,LOC104926792,LOC103363011,LOC101079731 coding downstream 70138 7815182 ~ 7820733 (+)
cfd LOC100692083,LOC102290312,LOC101478226,LOC102799388 coding downstream 145546 7890590 ~ 7898328 (+)
LOC120549854 NA non-coding upstream 80137 7661263 ~ 7663560 (+)
LOC120549853 NA non-coding upstream 82452 7660032 ~ 7661245 (+)
LOC120549545 NA non-coding upstream 238635 7501963 ~ 7505062 (+)
G200717 NA non-coding upstream 399695 7338346 ~ 7344002 (+)
G200704 NA non-coding upstream 481912 7261397 ~ 7261785 (+)
LOC120548816 NA non-coding downstream 32891 7777935 ~ 7779509 (+)
G200821 NA non-coding downstream 91603 7836647 ~ 7836954 (+)
G200831 NA non-coding downstream 153504 7898548 ~ 7898779 (+)
LOC120549436 NA non-coding downstream 603036 8348080 ~ 8357752 (+)
G200871 NA non-coding downstream 841031 8586075 ~ 8586414 (+)
LOC120550068 NA other upstream 843353 6900139 ~ 6900344 (+)
LOC120549783 NA other upstream 975035 6758637 ~ 6768662 (+)
vps29 eif5,vps29,LOC107595689 other upstream 996295 6732248 ~ 6747402 (+)
G200492 NA other upstream 1061106 6677658 ~ 6682591 (+)
G200452 NA other upstream 1171940 6568276 ~ 6571757 (+)
G201057 dcaf10,LOC102795877 other downstream 1475597 9220641 ~ 9221302 (+)
psen1 psen1,LOC100697238 other downstream 1846126 9591170 ~ 9604625 (+)
G201287 NA other downstream 1963820 9708864 ~ 9817625 (+)
smoc1 smoc1 other downstream 2190692 9935736 ~ 10007687 (+)
LOC120549492 NA other downstream 2296981 10042025 ~ 10044094 (+)

Expression


Co-expression Network