LOC120561092


Basic Information

Item Value
gene id LOC120561092
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 36770993 ~ 36782372 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804047.1
AAACTAGCCAGCAAACTGAGCTCGTCGCTGGGGCGATCAGCTGGGAAGAAGTTCCGTGCAGCAATGGAGCCTGGGCCGTGTAGTCCCGTTAGCAACGGAGGCGCAGCTCCTCTTTTGTTGCCAGTTCCCTCTGTACCGGGCCCTAAGTACCACCTCTTAGCTCATACCACCCTGTCGCTGTCACACGTCCAGGACAGCTTTCGCACACATGACCTCACCATCTCAGGCAACGAAGAGTGCTCATGTCCCCTCGCTCTATGGCAGTATGTGTAGCCGCCTCGCAGCTCAGCCTCACTGTATGACCCAGCAGATGATGAGTGGATGTTTGAAAGTGAAGCAGGTGGGCGGTGACCCTCAGAGTTGGACAAAAGTGTACGGCGCTCTAAAAGGAACGAGCCTTTTCTGTTACCACCGGCAAGAAGACGTGGAGGCTAACGTTGAGCCAGCTTTCACTATTGCCATCAACAAGGAGACCAGAATACGTGCGTCAGAGAAAGACCCCCAAAGTAAAGTTCAGAATATCTGTATCAGTAACCAGTACGGAGGAGAGGAGGTCACACACACCCTGACAACAGACAGCCGGGACGACACACACCGGTGGATGGAGGCCTTTTGGCAACATTTCTATGACATGAGCCAGTGGAAACAGTGCTGTGATGACTTAATGAAAATTGAACTGCCATCGCCAAGGAAACCGGCCCCTGCCACACCAAAACAGGGCTCGCTCTATCACGAAATGGTTATTGAGTCGTCTGACGACCTGAGCAGCACCGTGTCGGACATCCTGGCTCGGAGGATGCAGGAGCTGGAGCTCCGCAGCCAGCTGGGCACCTCTCCCACCTGGATGTCTGTGTTTGAGGAGAACAACCCCATAAGCGCTGGCCGCCCCCGTCCCTGTACCTCTCGCCTCTCTGGCCACAGCCCCTGCACCCCTCATCGCCTGCCCCGGAGCCCCGTGAGCCCCCACCGCTGCCCGCAGCTGAGTCTGCTGTCCTCCGATGCGAGCCTGACCTCGGACAGCGACAGCCACTGCAGCACCAGCCCCTGCTCTCACCGCCACGGCTGGCCCGAGCCCTCTTCAAACTTCTCTCTCTTGTTGTCTTCCCCGTCCCGCCTGAGGCCACGCACCCTGTCGCTGGATGCTAAGCTCAGCACCCTTCGAGGGAGGGGGTACGGAGCAGGGACCCTCCAGTGCCCCTGCCAGCCTCCCGCCTCCTCGCTGCTCGCCCCGCTCCCCGTTTCCTCTCGTTCACCTCGGTCCCAGCGCGGCACACAGACCACGctctcctgctccagctccaCCTCCAGCAGCAGCTCGGGCACCAGCGAGGGCAGCCACAGCCCCGAGTCGTCTGAGGGAGCCCCCTTCTCGAGGCCCTCCCCGGCTCGACGCAGCGGCCCTCCAGGGCGGACTGTGGATCCCCGCGCGGCAGCGGCAGCTCCGCGGGCTGCTGAACTACGCCCGCTGCCTGACCGCCATGGCCTGGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804047.1 True 1492 mRNA 0.61 8 36770993 36782372

Neighbor

gene id symbol gene type direction distance location
LOC120560592 rtkn coding upstream 182 36691830 ~ 36770811 (+)
smn1 LOC106520439 coding upstream 85057 36675399 ~ 36685936 (+)
lzts1 lzts1 coding upstream 109603 36632627 ~ 36661390 (+)
LOC120561138 LOC103362151 coding upstream 164677 36526718 ~ 36606316 (+)
bco2l LOC100708996,LOC103398249 coding upstream 248955 36508463 ~ 36522038 (+)
polr3g polr3g coding downstream 7376 36789748 ~ 36797174 (+)
adgrv1 adgrv1 coding downstream 21178 36803550 ~ 36979623 (+)
arsk arsk coding downstream 248169 37030541 ~ 37037965 (+)
ttc37 ttc37 coding downstream 255777 37038149 ~ 37062515 (+)
sorbs3 sorbs3,LOC103357659,LOC100702030,LOC102307094 coding downstream 284045 37066417 ~ 37110400 (+)
G67326 NA non-coding upstream 161199 36606597 ~ 36609794 (+)
G67263 NA non-coding upstream 513080 36257706 ~ 36257913 (+)
G67219 NA non-coding upstream 641998 36120895 ~ 36128995 (+)
G67216 NA non-coding upstream 674870 36094815 ~ 36096123 (+)
G67202 NA non-coding upstream 711507 36055684 ~ 36059486 (+)
G67373 NA non-coding downstream 229466 37011838 ~ 37030131 (+)
G67394 NA non-coding downstream 524868 37307240 ~ 37310186 (+)
G67522 NA non-coding downstream 562090 37344462 ~ 37345076 (+)
G67530 NA non-coding downstream 601216 37383588 ~ 37383822 (+)
G67563 NA non-coding downstream 695767 37478139 ~ 37478868 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 278298 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 289682 36477798 ~ 36481311 (+)
G67152 NA other upstream 747729 35871423 ~ 36023264 (+)
G67145 NA other upstream 916832 35841534 ~ 35854161 (+)
G67146 NA other upstream 918937 35840874 ~ 35852056 (+)
LOC120560165 LOC104964460,LOC103362321 other downstream 935531 37717903 ~ 37728705 (+)
si:ch211-214j8.12 NA other downstream 1527231 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 1573231 38355603 ~ 38407523 (+)
G67824 NA other downstream 1813439 38595811 ~ 38601821 (+)
G68023 NA other downstream 2627850 39410222 ~ 39461478 (+)

Expression


Co-expression Network