LOC120561138 (LOC103362151)


Basic Information

Item Value
gene id LOC120561138
gene name LOC103362151
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 36526718 ~ 36606316 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804104.1
TGCAAAAGAAGCGTTCACTTCCTCACACAGGAGCGCGCAGCTTTTTGGAGAGAGTCAGTGGTGGTGTTGGgggcgagaaaaaaaaaagatactatACAGTCAGCGTTTTGGAGCACTTTTCAAATGAGTTCTTCTATCTCGTTAGAGATATTGGCACAGCTGACTGACCGTTTCGCGCCAGTTTAAGGAATGTTTTAAGGACAAATTGTCTCCAAGGGGCAATCGGAGCTGGCAGTCTGAGCCCTTATAATGCGGAGAGATCAAGTCTCAGTAGTTGGTCGGTATGAACGCAGCGCAGACGGACCCTGAGAAACTGCTTTCATGGATTGACTGATTGATTCgcatttgattttttatttttttgcccaaTACCAGAGGATTTGTCTGTGTCGTGGTTAgtctattataaaaaaaaaaataaaaaacaaaaaaaaatcgtgGATTATTGTTGGGAGTCGAGGGTTTTTGTCGGAGGTGCGTGGGTAACGAGGatattgatttttattattattattattgattttttttaacagttagCCTACACCTGGGTCAAGGATCCGAAGAGGGGAATTAACCTTTCATAAGGTGGAAATATCAGTCGTGCTGGACCTTAACTCATCTCTCCAACAATATGAAGTCTGTCACTGTGTGGATGTGCGTTTACAGCTTTCTCCTGCTCTTAGATGAGGCAGCGAGTTCCTGGGATGGTCCCTCAGCTGTGTCCGTGTCTTTGGCCACTGGGTCTCCAGGATCTCAGGGCACCGGGTCTGGGCCCGGAGCTCAGACAGAATGGGTGGACTGCATCCAGGCGAGTGACTGGTGCAACCAGAACCCTCAATGCAGCTCTCGGTACCGGGTGATGCGCCAGTGCCTTGTGGGCAAGGAGAAGGAAGCCATGCTGGACAACAACAGGGAGTGCCAGGCTGCCTTGGAAGTGCTGCTGGTTAGTCCTCTGTATGACTGCCGCTGCAGGAGGGGCATGAAGAAGGAGCTGCAGTGTCTGCAGAACTACTGGACCATCCACATGGGGCTCACCGAAGGTGGTGACATGGACGACTCATCCCCGTATGAACCTGTAGCACCTAACCGACACCCTGACGCATTCCGCTTGGCCTCCATCTCTTCAGGGATGCTCACCGTGGCCCCAAAAGGTTTCCAGTGTCTCGACGCCGAGAAACACTGCAACCCCTGTCTTGATGCGGCCAAAGCCTGCAACCTCAACAGCAGCTGCAAGAGGCAACGCTCCGCCTACATCGCTACCTGCAGCAAGGAGGACCCCAACAAGGGTGAAGCGTGCAGCAAGAAGCGCTGCCACAAAGCGCTAAGGTTGTTCCTGGACCGTGTGCCCCCTGAGTTCAGCCACCGGCTGCTCTTCTGCCCCTGTCAGAGTGTGGGCTGCGCCGAACGACGCAGGCAGACAATCGTGCCTGATTGCTCCTATAAAGATAAGGAGAAACCCAACTGTCTGGAGCTGCGGAGGGTCTGCCGCCAGGACTCTCTCTGCAGGTCGAGGCTGGCTGATTACATGGTGAACTGCTGGGTGACTCCGCAGACAGTGAGCACCTGTCCCAACCAAGACAATCATCAAGCCTGCTTGGCCTCCTACGCAAGACTCATCGGGACGGACATGACTCCCAACTACGTCGACAGCAGCTTCTCCAACTGGACCATCTCCCCGTGGTGCACCTGCAAGGGCAGTGGAAACCAAGAAGAGGAATGTCTGAACTTCCTGCGGTACTTTACGGATAACACATGCCTAAGAAACGCCATTCAGGCCTTTGGTTACGGGATAGACAACATGCAGAACAAAAATGTGTCCGTCCCTGGTCCCTCTGCAACGACCAAGACGGGGACGGATTGGCCGGCGGGCACCTCCGAACCGCCCTTTGTCTCCATCCCAAAGTATCCTGAACCAAGAGACGGTGGCCTGGGCAAAACCCGGGGCTTGCCAGAGGATcactctgcctgtctgtgtgccaACGTCTGGGCTCTGCTTCCCGGCCTGGCTTTGGCTCTGGTCCTGGCCCAGCATGCCTTATAGAAGCGCcaggaagagaaaaaagaggTCATCCACCCACAAGCTGATCCCAAAAGCAGAAGGTGTTGTTTCTGAGACTGATATTAAGAAAAGGAGGCATCTCTGGGCAGTTGACATAACAGTAGATGGCATTtatgaaagaggaaaaaaaaaaaaagggaaaaaaaaagaggtcgAAAATATTGAAATTTTACAATTGTGAATGTGTTGTTCATTTGATGTATTGCTAGGGCAGAAAATGACTGTGATGAAGCACGTCGCTTTACAAAGGACCCTTGCTTGGAGAGGCGAGGAAGGTTGTTCTCTGGGAACGACCCCCCTCAGACTGTGACACAAAATCCCTGAAAGACTGAAGCTGATTATTTCAAAGACTTCTGCACTTTTCTCAccaaaggagggagagagggaatgaaCAACATAATTAAAAGAAGACAGGATTGACAGAAAAGAAATTGTTGCGGAGGGAAAAGGAATGAGCAAGAGGTAAAAGGGGTAGAGTGTGAGAGCGaaaggagaatgagagagagagagagagagagagagagagagaaagagacatatTTCTGCTATgagtcacacttttttttgtcttgaatTGGTTCTCGACTTAATCTTCTCTTGGATGAACAGACCACAAATTAATGGGCggggacggggggggggggggatgattaCATTCTGTCTCTTCAACACTAGTGTAAACTCTAAACTGTAAAGCCTACTCAGTGTTCTAAGTGTTGGTATAGTGTCCGTGACCATAATCAATCTACCGTAACAGCTCTTTCATTTGGGTGCTACAGTACAGTAATTTTTCAGCAGGCGGCGAAAAAGATCTAAAGATGGCGACGTAACCCCGCTAACGGTCCTTTGGTCATTTGAGATGTTGTTGTTAACGACTGTGGGTGTGCGCGCCATACGTCCACCTGCACATGTGTATATTTCTGTCTCTATGTATATAAACAAGACTTTTCTTTCATTCAACCAAATGATATCTACGGTACCTTGAATGGACATTACTGTACGCTGCAATGGCTCTGTATCGGTACTAATGAAAGGCCTTCATTATCTGCGTTTATATCTGTCTATTAAGGTTTAATCACAAAGAATGTATACAGGGATGAGATTAAACAAGCTCAAACTGCTTGGAAAGCCCTAA
>XM_039804105.1
TGCAAAAGAAGCGTTCACTTCCTCACACAGGAGCGCGCAGCTTTTTGGAGAGAGTCAGTGGTGGTGTTGGgggcgagaaaaaaaaaagatactatACAGTCAGCGTTTTGGAGCACTTTTCAAATGAGTTCTTCTATCTCGTTAGAGATATTGGCACAGCTGACTGACCGTTTCGCGCCAGTTTAAGGAATGTTTTAAGGACAAATTGTCTCCAAGGGGCAATCGGAGCTGGCAGTCTGAGCCCTTATAATGCGGAGAGATCAAGTCTCAGTAGTTGGTCGGTATGAACGCAGCGCAGACGGACCCTGAGAAACTGCTTTCATGGATTGACTGATTGATTCgcatttgattttttatttttttgcccaaTACCAGAGGATTTGTCTGTGTCGTGGTTAgtctattataaaaaaaaaaataaaaaacaaaaaaaaatcgtgGATTATTGTTGGGAGTCGAGGGTTTTTGTCGGAGGTGCGTGGGTAACGAGGatattgatttttattattattattattgattttttttaacagttagCCTACACCTGGGTCAAGGATCCGAAGAGGGGAATTAACCTTTCATAAGGTGGAAATATCAGTCGTGCTGGACCTTAACTCATCTCTCCAACAATATGAAGTCTGTCACTGTGTGGATGTGCGTTTACAGCTTTCTCCTGCTCTTAGATGAGGCAGCGAGTTCCTGGGATGGTCCCTCAGCTGTGTCCGTGTCTTTGGCCACTGGGTCTCCAGGATCTCAGGGCACCGGGTCTGGGCCCGGAGCTCAGACAGAATGGGTGGACTGCATCCAGGCGAGTGACTGGTGCAACCAGAACCCTCAATGCAGCTCTCGGTACCGGGTGATGCGCCAGTGCCTTGTGGGCAAGGAGAAGGAAGCCATGCTGGACAACAACAGGGAGTGCCAGGCTGCCTTGGAAGTGCTGCTGGTTAGTCCTCTGTATGACTGCCGCTGCAGGAGGGGCATGAAGAAGGAGCTGCAGTGTCTGCAGAACTACTGGACCATCCACATGGGGCTCACCGAAGGTGGTGACATGGACGACTCATCCCCGTATGAACCTGTAGCACCTAACCGACACCCTGACGCATTCCGCTTGGCCTCCATCTCTTCAGGGATGCTCACCGTGGCCCCAAAAGGTTTCCAGTGTCTCGACGCCGAGAAACACTGCAACCCCTGTCTTGATGCGGCCAAAGCCTGCAACCTCAACAGCAGCTGCAAGAGGCAACGCTCCGCCTACATCGCTACCTGCAGCAAGGAGGACCCCAACAAGGGTGAAGCGTGCAGCAAGAAGCGCTGCCACAAAGCGCTAAGGTTGTTCCTGGACCGTGTGCCCCCTGAGTTCAGCCACCGGCTGCTCTTCTGCCCCTGTCAGAGTGTGGGCTGCGCCGAACGACGCAGGCAGACAATCGTGCCTGATTGCTCCTATAAAGATAAGGAGAAACCCAACTGTCTGGAGCTGCGGAGGGTCTGCCGCCAGGACTCTCTCTGCAGGTCGAGGCTGGCTGATTACATGGTGAACTGCTGGGTGACTCCGCAGACAGTGAGCACCTGTCCCAACCAAGACAATCATCAAGCCTGCTTGGCCTCCTACGCAAGACTCATCGGGACGGACATGACTCCCAACTACGTCGACAGCAGCTTCTCCAACTGGACCATCTCCCCGTGGTGCACCTGCAAGGGCAGTGGAAACCAAGAAGAGGAATGTCTGAACTTCCTGCGGTACTTTACGGATAACACATGCCTAAGAAACGCCATTCAGGCCTTTGGTTACGGGATAGACAACATGCAGAACAAAAATGTGTCCGTCCCTGGTCCCTCTGCAACGACCAAGACGGGGACGGATTGGCCGGCGGGCACCTCCGAACCGCCCTTTGTCTCCATCCCAAAGCTCTCTGACCCTGTCCTGTCTCACCCCCGTCTGtctccctctgctcctctctcctcATCAAATGCCAGAACAAGGAAGCAGCACGAGTGTCTGAGTCATGTCTAACCTTTACacgtctctctccctctgtgtgtccctctg

Function

NR:

description
PREDICTED: GDNF family receptor alpha-2-like

GO:

id name namespace
GO:0048484 enteric nervous system development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804104.1 True 3194 mRNA 0.49 8 36526718 36606316
XM_039804105.1 False 2044 mRNA 0.52 8 36526718 36605016

Neighbor

gene id symbol gene type direction distance location
bco2l LOC100708996,LOC103398249 coding upstream 4680 36508463 ~ 36522038 (+)
LOC120560019 NA coding upstream 49224 36469678 ~ 36477494 (+)
klf9 LOC103362104 coding upstream 80951 36441132 ~ 36445767 (+)
cemip2 tmem2 coding upstream 309100 36178229 ~ 36217618 (+)
trnaf-gaa_4 NA coding upstream 350167 36176479 ~ 36176551 (+)
lzts1 lzts1 coding downstream 26311 36632627 ~ 36661390 (+)
smn1 LOC106520439 coding downstream 69083 36675399 ~ 36685936 (+)
LOC120560592 rtkn coding downstream 85514 36691830 ~ 36770811 (+)
LOC120561092 NA coding downstream 164677 36770993 ~ 36782372 (+)
polr3g polr3g coding downstream 183432 36789748 ~ 36797174 (+)
G67263 NA non-coding upstream 268805 36257706 ~ 36257913 (+)
G67219 NA non-coding upstream 397723 36120895 ~ 36128995 (+)
G67216 NA non-coding upstream 430595 36094815 ~ 36096123 (+)
G67202 NA non-coding upstream 467232 36055684 ~ 36059486 (+)
LOC120560688 NA non-coding upstream 628535 35895151 ~ 35898183 (+)
G67326 NA non-coding downstream 281 36606597 ~ 36609794 (+)
G67373 NA non-coding downstream 405522 37011838 ~ 37030131 (+)
G67394 NA non-coding downstream 700924 37307240 ~ 37310186 (+)
G67522 NA non-coding downstream 738146 37344462 ~ 37345076 (+)
G67530 NA non-coding downstream 777272 37383588 ~ 37383822 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 34023 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 45407 36477798 ~ 36481311 (+)
G67152 NA other upstream 503454 35871423 ~ 36023264 (+)
G67145 NA other upstream 672557 35841534 ~ 35854161 (+)
G67146 NA other upstream 674662 35840874 ~ 35852056 (+)
LOC120560165 LOC104964460,LOC103362321 other downstream 1111587 37717903 ~ 37728705 (+)
si:ch211-214j8.12 NA other downstream 1703287 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 1749287 38355603 ~ 38407523 (+)
G67824 NA other downstream 1989495 38595811 ~ 38601821 (+)
G68023 NA other downstream 2803906 39410222 ~ 39461478 (+)

Expression


Co-expression Network