bco2l (LOC100708996,LOC103398249)


Basic Information

Item Value
gene id bco2l
gene name LOC100708996,LOC103398249
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 36508463 ~ 36522038 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802109.1
tcctctgtgtttgtctgagcCAATCCGCAGAACGACCAGCCATGTCCAAGACCGCCGAGCCCCAGACACACAGCGTACCCAGCAGGCAGCGTTGTCCGCAGGCCAAAGGGCTGGAGAGCATTGAGCCTCTGGTGCGTTCTGTGGAGGAAACCCCTGATCCCATCCCTACCACTGTCACAGGAACTATTCCATCCTGGATCAATGGGAGCTTCCTGAGGAATGGTCCTGGAAAGTTTGAATTTGGGAAAGAcagATACACCCACTGGTTTGACGGCATGGCCATGATGCACCGGTTCCACATCTGTGAGGGCAACATCACCTACAGCAGCAGATTCCTGCGAAGTGACTCATACATCAGCAACTCAGAGAAGAACCGCATCGTGGTGTCAGAGTTCGGGACATTAGCCATGCCTGATCCCTGCAAGAACATCTTTGCGCGCTTCTTTTCACGCTTTCAGGTTCCGAAGGCCACAGATAACGCCAGTGTGAACTTTGTCAAGTACAAGGGGGACTATTATGTCAGCACCGAAACCAACTACATGAGACGAGTGGATCCACAGAGCCTGGAGACAAAGGAGAAGGTGGACTGGAGTCAATACATTGCTGTCAACTCGGCTACGGCTCACCCACACTATGACCGTGAGGGAGCCACATACAACATGGGCAACTCCTACGGAAAAAGCGGCTTCTTCTACAACATCATTCGTGTGCCTCCTCCTGGGGAGAAAGCAACGGAGGACTCCGCAGACCTGGATGGAGCCAAAGTGATCTGCTCCATCCGTGCAGCTGAACCCAGGAAGCCTTCCTATTTCCACAGCTTTGTCATGTCGGAGAACTACATTGTGTTCATCGAGCAGCCGATCAAGCTGGACCTGCTCAAGTTCATGCTGTACAGAATCCAGGGAAAGAGCTTTCATAAAGTCATGACCTGGGAGCCTCAGTATGAAACCATCTTCCACTTGGTCGACCGCCACACTGGCAAGCAGAGTGAGGTGAAGTACCGTGCAGCACCCATGTTCACACTGCATCAGATCAATGCTTTTGAAGAGGACGGGTTCTTGGTCATGGACATGTGCTGTGGGGACGATGGTGAGGTCATTGGAGACTTCACATTGGAGAATCTCCGCAGAGGACCGGGAGAAGAAATGGACAAGTTTTACAACTCGTTGTGCAGAAACCTCCCAAGGAGATATGTCTTGCCCCTGACTGTGGACGAACAAACTCGTTTGGACCAAAACCTTGTCACTCTGCATAAATATACAGCCACAGCAAAGAAGACCAACCCGAGAGAGGTTTACATGACCCACGAGGAACTTCACGATGACGAGCTGCTGCAATACGGCGGCCTTGAGTTCCCTCAGATCAACTATAACCAGTACAATGGCAGACCGTACCGCTACTTCTACTCCTGTGGCTTTGGACACGTCTTCGCTGATTCCCTGCTCAAAATGGATGTCCACACAAAGGAGCTTAAGGTGTGGCGTTATCCCGGCTTGTACCCGTCTGAGCCTGTCTTTGTTGCATCGCCCAAAGCTACCGAGGAAGATGATGGAGTGGTCTTGTCAGTCATCGTCACACCCAGAGAAGAGAAAAGTACTTTCCTACTCGTTCTGGATGCCAAGACCTTCACTGAGCTGGGAAGAGCAGAGGTCCCTGTCACTATCCCGTTCGGGACCCACGGCGTGTTTAACGAGATGGGCTAGCTGCGCCACGGTTTGCAGCTCTGCAGATAATTGATGAAATTGAACCAGTAACCAGCCACTTTATCTACAGTATAGAATATCTCTGTTGATGTCATTGCCTGTAAAATTCCTTTAACTGTGAAAGAAATAAAGAGCTGGGAAAAAAACGGCA

Function

NR:

description
PREDICTED: beta,beta-carotene 9',10'-oxygenase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802109.1 True 1854 mRNA 0.51 12 36508463 36522038

Neighbor

gene id symbol gene type direction distance location
LOC120560019 NA coding upstream 30969 36469678 ~ 36477494 (+)
klf9 LOC103362104 coding upstream 62696 36441132 ~ 36445767 (+)
cemip2 tmem2 coding upstream 290845 36178229 ~ 36217618 (+)
trnaf-gaa_4 NA coding upstream 331912 36176479 ~ 36176551 (+)
trnai-aau_2 NA coding upstream 346992 36161398 ~ 36161471 (+)
LOC120561138 LOC103362151 coding downstream 4680 36526718 ~ 36606316 (+)
lzts1 lzts1 coding downstream 110589 36632627 ~ 36661390 (+)
smn1 LOC106520439 coding downstream 153361 36675399 ~ 36685936 (+)
LOC120560592 rtkn coding downstream 169792 36691830 ~ 36770811 (+)
LOC120561092 NA coding downstream 248955 36770993 ~ 36782372 (+)
G67263 NA non-coding upstream 250550 36257706 ~ 36257913 (+)
G67219 NA non-coding upstream 379468 36120895 ~ 36128995 (+)
G67216 NA non-coding upstream 412340 36094815 ~ 36096123 (+)
G67202 NA non-coding upstream 448977 36055684 ~ 36059486 (+)
LOC120560688 NA non-coding upstream 610280 35895151 ~ 35898183 (+)
G67326 NA non-coding downstream 84559 36606597 ~ 36609794 (+)
G67373 NA non-coding downstream 489800 37011838 ~ 37030131 (+)
G67394 NA non-coding downstream 785202 37307240 ~ 37310186 (+)
G67522 NA non-coding downstream 822424 37344462 ~ 37345076 (+)
G67530 NA non-coding downstream 861550 37383588 ~ 37383822 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 15768 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 27152 36477798 ~ 36481311 (+)
G67152 NA other upstream 485199 35871423 ~ 36023264 (+)
G67145 NA other upstream 654302 35841534 ~ 35854161 (+)
G67146 NA other upstream 656407 35840874 ~ 35852056 (+)
LOC120560165 LOC104964460,LOC103362321 other downstream 1195865 37717903 ~ 37728705 (+)
si:ch211-214j8.12 NA other downstream 1787565 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 1833565 38355603 ~ 38407523 (+)
G67824 NA other downstream 2073773 38595811 ~ 38601821 (+)
G68023 NA other downstream 2888184 39410222 ~ 39461478 (+)

Expression


Co-expression Network