G67394


Basic Information

Item Value
gene id G67394
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 37307240 ~ 37310186 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU90117
ACTTTAGCTAATTCAATAgcaatcgcaatatctggcGGAAAAATCTCAATTAGATTTTCTCCttaaatcgttcagccctagttcaTATCAACGACGTTGCTCAGTGTTTATAGAGTAGTGGTTCGTAATGTGACTACCCCCTCCCCAGGGGTATGGATgggtttaaaagtaaaatataacaatGTTATTATGTCAGTGCTGTTTAAATTTCAACATAATGCACTCatgttttttacattattacGGCCTTTCTTTACTTCCACAGTGGTGAGTtggcacacagagaacacatgACCAATGTTGCACAGTTTCATAATATTTTATTTGTCAATGCAGCGGATGATGTAATGTGGGTGATAACGAAAGACAAGGTGTCTCGATGTAACACAATAATGGATGAGGTGAAGGTGATGTTTCATCCATTAAgtccattattttattttgacatttcagAGTGTGTTGTTGAACTTATACCATGGCCGCTTACCAAAGGTCAACCCAATTCTCACCCCCAACTagtcaaatactgacgcttggtcagtggttGCTCAGCGacagataccgacgcaaaaggcactagggctgggtattgccAGGGATCGATTTTATTCCCGATTCGACTTTAttccaattcaattttattttcgATTTGATATATTTGATATCAATTAGGTCAGGAACATTTCAGTTACTATACCAATTTAGCTTGGGAATTAAAGAGATTCTACAATTGTACAAGGTTCCCTCTAACCTGCCGCATTATTAAAAGTATCAATGAAAAACTGACCCCAAAGCAGTTACAttaatactttttatttaacataaacGCACAAAGTGCCGCTCTACAGAGTCTACACTCAGTGAGTTTTGAGTGACATTTCATTTAGATATCCTAAAGGTAACAGAGGGACCCCTATGAAAATGGCCATGTTTTCCCTCACCAAAATGTAGCCTATCTTTGGAGGGTTATTAGGTAACCCCCTTTCCGGCACGCTAACATGACATAGTCGGTACCAATGGTCTTTTAGTTTCATGTGATACAGACAAAGATTGGTTCTTGGATTTTATGAAACGATTTTggatcattcaaatgaaaatcgGAATATCGTTATTTTTTAATCCCAGCCCTAAAAGgctcgaccgcggcgctgtaagatgacgtagtatgaaGAGCGATAATGacagcgagtagtatgaaagactgaAAATCTGTGTAAGGAGGcatgttggggtggtggatgggtcaaaacaACACTTACGGGACAGTTAGTCCTAACTgtctgtcccgttcttgtcccgcatgTCCCAACCCACGATATTTTCCTAACCTTAACTTAATGGTTTTCCCCTGCTCCCAAAAAATTCCGCCAAATcggtcccgacccagagcgtcaaaaagtggcACCAACGGTCCTGACAAAACGCGTCGATAAATGAAGCCAAAGGGCGACCGTGAGGGTCAAATATCGCCACAGGTGGGATTACGTTGGGATGAGTTGAAAGCCCCCTACGTCTGactgagacgctaaaggagactttttgacCAAGCATTAGTTTTTGATGCCTGGAAGTGAGACTGTTGCAAAGGTAGAGAGTTTACTGGTAGCATGGAGCAGGAGTGTTATGTATGGCCACCTGCAGTTTGTAATTCTGTACCTTGCGCAGtaattggtaacactttacaataaggtacacaaaaaaataggtagttactgtttttgaaagggtagttaccctttttcagaagggtaacgaatgattagttaccctttttcagaagggtagttacccttttttagaagggtaacgaatgattagttaccaTTTTTCAGAagagtagttacccttttttaGAAGgatagttactgtttttcagaaggatAGTTACCCTTTTTTAGAAGGGTAATGAATGATTAGTTACcatttttcagaagggtagttacccttttttaGAAGgatagttactgtttttcaaaaGGATAGTTACCCTTTTTTAGAAGgatagttactgtttttcagaaggatAGTTACCCTTTTTTAGAAGGGTAACAAatgattagttaccctttttcagaagggtagttacctattttttgtgtaccttattgtaaagtgttacccagtAATTTATAGTAATGGTTAACTGATGAGCGGAATCATGTTTGAGTTGTCCTGATGTAAGATATAAACAGCCAACCAATCGGAAATGAACATGTTCCATAGCCATGGTATACCTTAACATAGACGAAGAGATTAAAGCGAGATAACTATTGTGTGGATGCAGAGTCTAGGCTCAAAAACAGACCGATCAAGACTAAAAACAGACACCAGTATTGTTGAATAtatgaatgcacacagcccTTTGGTTTAGCTCCTATTTTTACGCTGACAAGTCTGTGCCATGACAGTGAAGACAGCCATGCCAGAATCATGACCATGTAATAAGTTAAAAGTTGCTACAGATTCAGTGTATCAAAATAACTTACCAGATAATATACTGTAAAACATTAGTCCATGCTGTCATTTTTGAAACCACAGGCCACATACGCTGTGTCCAAAGGTCAACTGGAATGCATTTCAAACGTGCAGTTCAGGACACTTTGTTGTCACCTAATGTCAAGTGAAGTGCTGTGCTGCCGCAGTCTGTCTCCTGCCCACGGAGACGGTCACAGTGTTCCTGTCCAGACCAAATCAGCTGTTTGTCTTCAGTGGGTCCAGTCATCTCTTTGGGGTTAGCTACATTCAGCCAGGTTTATCAGGGCCGCCGGCTGTGCTTTTCTTCAGCCTGCCCTCCCTGCTGTTTGGTCTCAGCCTCCGCGGGGATCACACTAACGGCTGGGGAGCATAGTTTGCTTCAGTAGCTCGACTTTTCTACAGTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90117 True 2882 lncRNA 0.41 2 37307240 37310186

Neighbor

gene id symbol gene type direction distance location
rab11fip1a rab11fip1 coding upstream 47930 37233747 ~ 37259310 (+)
adgra2 adgra2 coding upstream 75425 37160244 ~ 37231815 (+)
pdlim2 pdlim2 coding upstream 155582 37111859 ~ 37151658 (+)
sorbs3 sorbs3,LOC103357659,LOC100702030,LOC102307094 coding upstream 196840 37066417 ~ 37110400 (+)
ttc37 ttc37 coding upstream 244725 37038149 ~ 37062515 (+)
LOC120560422 LOC103357666 coding downstream 78473 37388659 ~ 37421883 (+)
med22 med22,LOC104930648 coding downstream 112270 37422456 ~ 37432110 (+)
nfu1 nfu1,LOC103362311,LOC106520164,LOC100703913,LOC107393744 coding downstream 127696 37437882 ~ 37444341 (+)
LOC120560121 gfpt1,LOC104930651,LOC103362312 coding downstream 136031 37446217 ~ 37471801 (+)
kansl3 kansl3,LOC102793526,LOC106579846 coding downstream 243192 37553378 ~ 37575457 (+)
G67373 NA non-coding upstream 277109 37011838 ~ 37030131 (+)
G67326 NA non-coding upstream 697446 36606597 ~ 36609794 (+)
G67263 NA non-coding upstream 1049327 36257706 ~ 36257913 (+)
G67219 NA non-coding upstream 1178245 36120895 ~ 36128995 (+)
G67216 NA non-coding upstream 1211117 36094815 ~ 36096123 (+)
G67522 NA non-coding downstream 34276 37344462 ~ 37345076 (+)
G67530 NA non-coding downstream 73402 37383588 ~ 37383822 (+)
G67563 NA non-coding downstream 167953 37478139 ~ 37478868 (+)
G67568 NA non-coding downstream 192516 37502702 ~ 37504728 (+)
G67570 NA non-coding downstream 235726 37545912 ~ 37547224 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 814545 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 825929 36477798 ~ 36481311 (+)
G67152 NA other upstream 1283976 35871423 ~ 36023264 (+)
G67145 NA other upstream 1453079 35841534 ~ 35854161 (+)
G67146 NA other upstream 1455184 35840874 ~ 35852056 (+)
LOC120560165 LOC104964460,LOC103362321 other downstream 407717 37717903 ~ 37728705 (+)
si:ch211-214j8.12 NA other downstream 999417 38309603 ~ 38323496 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other downstream 1045417 38355603 ~ 38407523 (+)
G67824 NA other downstream 1285625 38595811 ~ 38601821 (+)
G68023 NA other downstream 2100036 39410222 ~ 39461478 (+)

Expression


Co-expression Network