G291633


Basic Information

Item Value
gene id G291633
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 7769269 ~ 7769478 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU345529
ggaggttattataacagcaaaaagggactaaatctggaatgggatgttcaacaagcacatatgagtttgatggtcaggtggccACAAACCTTTGTCCATATAATGTACTTTCTGGTTGGATagcacagatacagacagatatAAAGATGACATAGGCTGGAAGTTATTAGACACTATTCATATCACATTTGGAAGTGATAATGCAAAAAC

Function

NR:

description
cytochrome c

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU345529 True 210 lncRNA 0.37 1 7769269 7769478

Neighbor

gene id symbol gene type direction distance location
ppm1ab ppm1a,LOC108258036,LOC108434987 coding downstream 56392 7689203 ~ 7712877 (-)
prkchb LOC108258108,LOC108434990 coding downstream 171480 7569028 ~ 7597789 (-)
hif1ab hif1a,LOC100305068 coding downstream 205225 7547098 ~ 7564044 (-)
snapc1a NA coding downstream 223089 7539918 ~ 7546180 (-)
si:ch211-212g7.6 LOC108257884 coding downstream 231598 7522861 ~ 7537671 (-)
ckbb ckb,LOC108257851,LOC108434982,LOC102782142,LOC100699354,LOC102312842,LOC107560383 coding upstream 63850 7833328 ~ 7837002 (-)
xrcc3 xrcc3 coding upstream 109169 7878647 ~ 7885540 (-)
btbd6b btbd6,btbd6b,LOC107755235,LOC106571711,LOC107718408 coding upstream 133565 7903043 ~ 7906891 (-)
daam1b daam1b,LOC108257948,LOC108412077 coding upstream 532019 8301497 ~ 8349652 (-)
mark3b LOC108258043,LOC108412004 coding upstream 616157 8385635 ~ 8440705 (-)
G291629 NA non-coding downstream 1153 7767842 ~ 7768116 (-)
G291593 NA non-coding downstream 1503 7676537 ~ 7767766 (-)
LOC113545333 NA non-coding downstream 506987 7259917 ~ 7262282 (-)
G291198 NA non-coding downstream 749585 7017034 ~ 7019684 (-)
G291199 NA non-coding downstream 753382 7014734 ~ 7015887 (-)
G291813 jag2 non-coding upstream 354167 8123645 ~ 8125793 (-)
G291951 NA non-coding upstream 527652 8297130 ~ 8297344 (-)
G291949 l3hypdh,LOC107684001 non-coding upstream 528656 8298134 ~ 8298613 (-)
G291969 NA non-coding upstream 650938 8420416 ~ 8425470 (-)
G292009 NA non-coding upstream 697331 8466809 ~ 8467017 (-)
six6b six6b,LOC108257662,LOC107743981,LOC107589092,LOC103035477,LOC107697293,LOC107701490,LOC108434975 other downstream 101483 7665134 ~ 7667786 (-)
ppp2r5ea ppp2r5ea,LOC108434994,LOC103032801,LOC108257929,LOC107697307,LOC107701493,LOC107563687,LOC107707079,LOC107743972 other downstream 248428 7503849 ~ 7520841 (-)
xkr6b xkr6b,LOC108258067,LOC107684793,LOC108435015,LOC107723320,LOC107589046,LOC107746102,LOC107701509,LOC103023855 other downstream 786460 6936128 ~ 6982809 (-)
igfbp3 LOC100305016,LOC108416115 other downstream 1787106 5962339 ~ 5982163 (-)
si:dkeyp-51f12.3 NA other downstream 1933787 5829107 ~ 5835482 (-)
LOC113545183 LOC108258142,LOC108257835 other upstream 417265 8186743 ~ 8294574 (-)
fkbp1b fkbp1b other upstream 814715 8584193 ~ 8598167 (-)
LOC113545281 samd15 other upstream 1718740 9488218 ~ 9491270 (-)
znf410 LOC108258012,LOC108411620,LOC103043020,LOC103375802,LOC107659809 other upstream 1739103 9508581 ~ 9516177 (-)
lrfn2b LOC108257564,LOC106582474 other upstream 1981513 9750991 ~ 9868641 (-)

Expression


Co-expression Network