Gene
RNA
| Item | Value |
|---|---|
| gene id | trnah-gug_23 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 20365285 ~ 20365551 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU353886 | True | 212 | lncRNA | 0.49 | 1 | 20365285 | 20365496 |
| trnah-gug_23 | False | 72 | tRNA | 0.57 | 1 | 20365480 | 20365551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnar-acg_18 | NA | coding | downstream | 527 | 20364686 ~ 20364758 (-) |
| trnae-uuc_12 | NA | coding | downstream | 759 | 20364455 ~ 20364526 (-) |
| trnah-gug_22 | NA | coding | downstream | 6958 | 20358256 ~ 20358327 (-) |
| trnar-acg_17 | NA | coding | downstream | 10387 | 20354826 ~ 20354898 (-) |
| trnae-uuc_11 | NA | coding | downstream | 10617 | 20354597 ~ 20354668 (-) |
| LOC113524770 | calm1,LOC102778633,LOC102293206,LOC107396020,LOC105896953 | coding | upstream | 27089 | 20392640 ~ 20403559 (-) |
| trnae-uuc_14 | NA | coding | upstream | 53739 | 20419290 ~ 20419361 (-) |
| trnae-uuc_15 | NA | coding | upstream | 56304 | 20421855 ~ 20421926 (-) |
| trnae-uuc_16 | NA | coding | upstream | 57960 | 20423511 ~ 20423582 (-) |
| LOC113524747 | LOC108258215 | coding | upstream | 59734 | 20425285 ~ 20437474 (-) |
| G298758 | NA | non-coding | downstream | 117370 | 20247235 ~ 20247915 (-) |
| G298757 | LOC108258230 | non-coding | downstream | 118883 | 20243428 ~ 20246402 (-) |
| G298752 | NA | non-coding | downstream | 128051 | 20236928 ~ 20237234 (-) |
| LOC117599709 | NA | non-coding | downstream | 174641 | 20190083 ~ 20190644 (-) |
| LOC117599712 | NA | non-coding | downstream | 181711 | 20183058 ~ 20183574 (-) |
| G298794 | NA | non-coding | upstream | 23533 | 20389084 ~ 20390717 (-) |
| G298801 | NA | non-coding | upstream | 63963 | 20429514 ~ 20430208 (-) |
| G298823 | NA | non-coding | upstream | 126458 | 20492009 ~ 20501140 (-) |
| LOC117599711 | NA | non-coding | upstream | 279838 | 20645389 ~ 20646391 (-) |
| G298878 | NA | non-coding | upstream | 310492 | 20676043 ~ 20677510 (-) |
| G298543 | LOC108261534 | other | downstream | 424286 | 19884160 ~ 19940999 (-) |
| G298475 | NA | other | downstream | 773848 | 19590959 ~ 19591437 (-) |
| LOC113524722 | NA | other | downstream | 891309 | 19472020 ~ 19473976 (-) |
| LOC113524711 | NA | other | downstream | 913681 | 19429191 ~ 19451604 (-) |
| LOC113525604 | LOC108258223 | other | downstream | 954911 | 19374773 ~ 19410374 (-) |
| trnah-gug_24 | NA | other | upstream | 4657 | 20370208 ~ 20370279 (-) |
| trnae-uuc_13 | NA | other | upstream | 12754 | 20378305 ~ 20378376 (-) |
| trnah-gug_25 | NA | other | upstream | 13283 | 20378834 ~ 20378905 (-) |
| LOC117599698 | NA | other | upstream | 74069 | 20439620 ~ 20442292 (-) |
| G298875 | NA | other | upstream | 290448 | 20655999 ~ 20664540 (-) |
