G298475


Basic Information

Item Value
gene id G298475
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 19590959 ~ 19591437 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU353447
tGATGTcagtccaccttttgcagctattacagcttcaactcttctgggaaggctgtccacaaggttgaggagtgtgtttataggaatttttgaccattcttccaaaagcgcattggtgaggtcacacactgatgttggtcgagaaggcctggctctcagtctccgctctaattcatcccaaaggtgttctatcgggttcaggtcaggactctgtgcaggccagtcaagttcctccacaccaaactctgtcatccatgtctttatggaccttgctttgtgcactggtgcacagtcatgttggaagaggaaggggcccgctccaaactgttcccacaaggttgggagcatggaattgtccaaaatgttttggtatcctgaagcattcaaagttcctttcactggaactaaggggccaagcccaacccctgaaaaacaaccccacaccataattcctcctccaccaaatttcacactcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU353447 True 479 TUCP 0.49 1 19590959 19591437

Neighbor

gene id symbol gene type direction distance location
LOC113523950 NA coding downstream 22518 19566942 ~ 19568441 (-)
LOC113523951 NA coding downstream 48213 19541505 ~ 19542746 (-)
LOC113523941 NA coding downstream 70679 19483889 ~ 19520280 (-)
LOC117599702 NA coding downstream 145623 19411881 ~ 19445336 (-)
LOC113524709 nitr1,LOC108261534 coding downstream 231109 19357778 ~ 19359850 (-)
LOC117599714 NA coding upstream 120210 19711647 ~ 19712051 (-)
LOC117599694 LOC108261534 coding upstream 272697 19864134 ~ 19865662 (-)
LOC117599680 NA coding upstream 284725 19876162 ~ 19877745 (-)
LOC117599719 LOC108261534 coding upstream 333189 19924626 ~ 19931253 (-)
LOC117599697 LOC108261534 coding upstream 514321 20105758 ~ 20107245 (-)
G298436 LOC108261089,LOC108262065 non-coding downstream 23401 19358070 ~ 19567558 (-)
G298444 NA non-coding downstream 48198 19377665 ~ 19542761 (-)
G298449 LOC108257688 non-coding downstream 177025 19409824 ~ 19413934 (-)
G298400 NA non-coding downstream 265252 19325497 ~ 19325707 (-)
G298358 NA non-coding downstream 364274 19226399 ~ 19226685 (-)
LOC117599713 NA non-coding upstream 235556 19826993 ~ 19827924 (-)
G298549 NA non-coding upstream 362507 19953944 ~ 19954298 (-)
LOC117599712 NA non-coding upstream 591621 20183058 ~ 20183574 (-)
LOC117599709 NA non-coding upstream 598646 20190083 ~ 20190644 (-)
G298752 NA non-coding upstream 645491 20236928 ~ 20237234 (-)
LOC113524722 NA other downstream 116983 19472020 ~ 19473976 (-)
LOC113524711 NA other downstream 139355 19429191 ~ 19451604 (-)
LOC113525604 LOC108258223 other downstream 180585 19374773 ~ 19410374 (-)
ubr7 LOC108257828,LOC108411326 other downstream 507448 19070460 ~ 19083511 (-)
dpf3 dpf3,LOC108257599,LOC108424513,LOC107659173,LOC107721322,LOC107668213,LOC107562702,LOC107602065,LOC107756570 other downstream 1484966 18072545 ~ 18105993 (-)
G298543 LOC108261534 other upstream 292723 19884160 ~ 19940999 (-)
trnah-gug_23 NA other upstream 773848 20365285 ~ 20365551 (-)
trnah-gug_24 NA other upstream 778771 20370208 ~ 20370279 (-)
trnae-uuc_13 NA other upstream 786868 20378305 ~ 20378376 (-)
trnah-gug_25 NA other upstream 787397 20378834 ~ 20378905 (-)

Expression


Co-expression Network