LOC113524722


Basic Information

Item Value
gene id LOC113524722
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 19472020 ~ 19473976 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>LOC113524722
CAGGCATGAGTCTGGACCTGGTTTTCTACTGAACACACAAGTTCCTTACCTCACTATCACTTTGTCTAAACAGGAACGATGATCACACTCTTTGCCGCTCTTTACTCTCTGCTTTGTCTCTGCACAGCTGCAAAAACTTCTGACATCAAGGAGCTTCACGTGAAAACAGTAAAGCGTGGAGAAAATGTAACTATGGGGTGTAACTTTAACATCAAAAACAAAGATAATTTATTTTGGTACAGACAGAGTTTTGGAAAATTGCCTAAGTTTTTTGCAAAACCATACAGAGGCACTTTGGGCTACACATTTGATGAGGGATTTAATGATAGCCGCTTCAGTATTACTGTAAATGCCCATAAGTTTGATctcaaaattaaagaaataagaGAAGATGATGGAGGAGATTATTTCTGTATAGAAGTTGATGGAAGTTTACTAAAGTTCACATCTGGAACACGTCTGCAATTTGAAGataAAGAGATGAAACTCTGTCCTACACCTGGAACGGTTAACAAGAACACAGATTCTGGTACACTCCAGGGTTCAGACAGCAGCGATGGAAAAGGTTTCCTGCACAATGCCATGCCATGCTTGTAAACAGTGCTGTTCTTTGTTGCATGTCTGTTGgtaccaaaggaaaataataaaaacagcaaatggatGAACATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC113524722 True 671 V_segment 0.39 4 19472020 19473976

Neighbor

gene id symbol gene type direction distance location
LOC117599702 NA coding downstream 26684 19411881 ~ 19445336 (-)
LOC113524709 nitr1,LOC108261534 coding downstream 112170 19357778 ~ 19359850 (-)
LOC113547659 NA coding downstream 150530 19314727 ~ 19321490 (-)
LOC113547703 NA coding downstream 173992 19277991 ~ 19298028 (-)
LOC113547697 NA coding downstream 205011 19265827 ~ 19267009 (-)
LOC113523941 NA coding upstream 9913 19483889 ~ 19520280 (-)
LOC113523951 NA coding upstream 67529 19541505 ~ 19542746 (-)
LOC113523950 NA coding upstream 92966 19566942 ~ 19568441 (-)
LOC117599714 NA coding upstream 237671 19711647 ~ 19712051 (-)
LOC117599694 LOC108261534 coding upstream 390158 19864134 ~ 19865662 (-)
G298449 LOC108257688 non-coding downstream 58086 19409824 ~ 19413934 (-)
G298400 NA non-coding downstream 146313 19325497 ~ 19325707 (-)
G298358 NA non-coding downstream 245335 19226399 ~ 19226685 (-)
G298350 NA non-coding downstream 252339 19219117 ~ 19219681 (-)
G298349 NA non-coding downstream 254781 19216638 ~ 19217239 (-)
LOC117599713 NA non-coding upstream 353017 19826993 ~ 19827924 (-)
G298549 NA non-coding upstream 479968 19953944 ~ 19954298 (-)
LOC117599712 NA non-coding upstream 709082 20183058 ~ 20183574 (-)
LOC117599709 NA non-coding upstream 716107 20190083 ~ 20190644 (-)
G298752 NA non-coding upstream 762952 20236928 ~ 20237234 (-)
LOC113524711 NA other downstream 20416 19429191 ~ 19451604 (-)
LOC113525604 LOC108258223 other downstream 61646 19374773 ~ 19410374 (-)
ubr7 LOC108257828,LOC108411326 other downstream 388509 19070460 ~ 19083511 (-)
dpf3 dpf3,LOC108257599,LOC108424513,LOC107659173,LOC107721322,LOC107668213,LOC107562702,LOC107602065,LOC107756570 other downstream 1366027 18072545 ~ 18105993 (-)
acot20 LOC108257587,LOC108257591 other downstream 1756748 17707286 ~ 17715272 (-)
G298475 NA other upstream 116983 19590959 ~ 19591437 (-)
G298543 LOC108261534 other upstream 410184 19884160 ~ 19940999 (-)
trnah-gug_23 NA other upstream 891309 20365285 ~ 20365551 (-)
trnah-gug_24 NA other upstream 896232 20370208 ~ 20370279 (-)
trnae-uuc_13 NA other upstream 904329 20378305 ~ 20378376 (-)

Expression


Co-expression Network