Gene
RNA
| Item | Value |
|---|---|
| gene id | trnar-acg_15 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 20334723 ~ 20334795 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnar-acg_15 | True | 73 | tRNA | 0.58 | 1 | 20334723 | 20334795 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnah-gug_15 | NA | coding | downstream | 23844 | 20310808 ~ 20310879 (-) |
| trnar-acg_12 | NA | coding | downstream | 25131 | 20309520 ~ 20309592 (-) |
| trnae-uuc_5 | NA | coding | downstream | 25363 | 20309289 ~ 20309360 (-) |
| gtf2a1 | gtf2a1,LOC107721813,LOC107658177 | coding | downstream | 30976 | 20293412 ~ 20303747 (-) |
| nfkbiaa | LOC108258222 | coding | downstream | 54878 | 20276967 ~ 20279845 (-) |
| trnah-gug_19 | NA | coding | upstream | 2249 | 20337044 ~ 20337115 (-) |
| trnae-uuc_9 | NA | coding | upstream | 2918 | 20337713 ~ 20337784 (-) |
| trnar-acg_16 | NA | coding | upstream | 3147 | 20337942 ~ 20338014 (-) |
| trnah-gug_20 | NA | coding | upstream | 3744 | 20338539 ~ 20338610 (-) |
| trnae-uuc_10 | NA | coding | upstream | 8918 | 20343713 ~ 20343784 (-) |
| G298758 | NA | non-coding | downstream | 86808 | 20247235 ~ 20247915 (-) |
| G298757 | LOC108258230 | non-coding | downstream | 88321 | 20243428 ~ 20246402 (-) |
| G298752 | NA | non-coding | downstream | 97489 | 20236928 ~ 20237234 (-) |
| LOC117599709 | NA | non-coding | downstream | 144079 | 20190083 ~ 20190644 (-) |
| LOC117599712 | NA | non-coding | downstream | 151149 | 20183058 ~ 20183574 (-) |
| G298794 | NA | non-coding | upstream | 54289 | 20389084 ~ 20390717 (-) |
| G298801 | NA | non-coding | upstream | 94719 | 20429514 ~ 20430208 (-) |
| G298823 | NA | non-coding | upstream | 157214 | 20492009 ~ 20501140 (-) |
| LOC117599711 | NA | non-coding | upstream | 310594 | 20645389 ~ 20646391 (-) |
| G298878 | NA | non-coding | upstream | 341248 | 20676043 ~ 20677510 (-) |
| G298543 | LOC108261534 | other | downstream | 393724 | 19884160 ~ 19940999 (-) |
| G298475 | NA | other | downstream | 743286 | 19590959 ~ 19591437 (-) |
| LOC113524722 | NA | other | downstream | 860747 | 19472020 ~ 19473976 (-) |
| LOC113524711 | NA | other | downstream | 883119 | 19429191 ~ 19451604 (-) |
| LOC113525604 | LOC108258223 | other | downstream | 924349 | 19374773 ~ 19410374 (-) |
| trnah-gug_23 | NA | other | upstream | 30490 | 20365285 ~ 20365551 (-) |
| trnah-gug_24 | NA | other | upstream | 35413 | 20370208 ~ 20370279 (-) |
| trnae-uuc_13 | NA | other | upstream | 43510 | 20378305 ~ 20378376 (-) |
| trnah-gug_25 | NA | other | upstream | 44039 | 20378834 ~ 20378905 (-) |
| LOC117599698 | NA | other | upstream | 104825 | 20439620 ~ 20442292 (-) |
