dok3 (dok3)


Basic Information

Item Value
gene id dok3
gene name dok3
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 23285708 ~ 23297814 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026947064.2
GTATCTGACACTTAGCAACAtgtgcatagcaacagataCAGCGCCAGATGGCTACAAAGTGGCCTATATGGCGTGTGCTAAAAGCGTAATTACATGGTACATGTATTTTACAGACTGGCACCTCGATGTATAAATGGTACATTACAAACCATTACTTCTGTATGTTTCCTGTCACTCAGAAGTACGTCTGGCTATGATTAACATCATGCTTATAGACGCTCCTGGTGGTGAATGACGCAACGTGCATGCGGAAATTCACATTAATCTTTTTGGTGGCTGGTTGGTGACACGCTCTTCAGTTCTCCTCAGCTCTAACGCGAGAAGAAGTGCTGAAGGATTTGCACTGAAGCGGCACAATGGATATATTAGTGAAAGAAGGCTCGCTGTTTTTACAGGGAGTCAAATTTGGAAAGAAGATCTGGAGGAAGATTTGGGTGACAGTGTTTAAGCCTAGCCAGGCGGGAATCGGTCGCATTGAGATGTATGACATGAGGGAAGGAGCAGGCATGTCTGCGAAGCTTGCCATGCTAAAGAAAGCTGAGAAGCGGGTGATCCGGCTGGCAGAGTGCCTCAGCGTGACGCCGGCGCTGGGTGAAAGTTGCCCGGCAGGCTGCACAGCCTTTTACCTCAACACAGCTCAGCGCATCTACACTCTGGCAGCGCCGACGCAGGACGAATGGGTAtctgctctctgctctctgGCATTTCAGTGGAACGAGGGAGGTGGCGAGGCCAGGAGAGCGCAGggagatggtggtggtgatgatgcgCCCATGACTGAAAACGACATCTACTCCACCTTGAGTCCAGGTCAGTTccaggtgacggtggcaagctCAGAGGCATCCATTCGTTGCTGCATGTTCGGATCGTACCTGCTGTCCCCTGAGAAAGAGTCCCTGTGCCTGCTGAACATGAAGACAGGCCATGCTGCGTTCTGCTGGCCGTATCGCTTTCTCCGCAGATTTGGCCTGGTCAAGGAAGGAATAACTATCGAGGCAGGCCGTCGTTGCCAAACAGGAGAGGGCCTCTTCATTTTCCTTTCCAAGCAGGGGCCACAGATCTACCGGGCTATCGAGGAGGCCATCATGCATCAAAGCGTGCAAGACCTGCTGTCCAAAGCTACCGCTTTGCCGCAAGAGAATACGCTCCCACCGCCACCGCCACCGCCACCGCAAACAGCCAGTCCGGCATCTCCAAAATCTGGCATCTCTCGAAGAAACCTTGCACTACCTGCACTTCCCGGCACAAAACCCCCCATCAGAAGCCCTCAACCTGAATCTACCTGAAGCACTGTATGCCAAGGTAAAGCCTCTGCCCAAACCAAGAAATGTACCGACACCTCCAGCTTTGCCTGTGCCCAAACTCATGCCTGAGCCAGAGACAAAGCCAAAAGATTTGGACATTAGTGACCAGGAACCTGACTATGAGTCCTGTGACTGGAACCAGAAAACCCAGACGAAGGAGGACAGTTCTGACAGTCAGTTGTACAGCACAGTCAGACCTCTGCTCCATACCAGAAGAAAACCCGATGTAGATACCAACCAAGAGCAGCTTAAAAGCAGCCGACAGTCTCCCGAATTTGGCCACGCCGAAGTCCCGGTCAGCTTCAAACAAATCCTATCCGATGTTCTCTTCAAAGATGTGACCAGGATCGCACCACCTCCTCCACCCAAAACATACAGAGAGAACTCAAATCTCTCAGCTGAACCGGATTACTATGAGATCCAGAAATGAACTAACCACTATTAAAAGAAACCCAACCGTAGTGTGTTCGGAAGGTCTGAAGCAACGTGGATCTGATTTCCCAGCTGTTGTAAAACCTTCGTGCAAAAATGCTTTTTCTATCAGGTCTCAATTTGATTTCTCTGGTACCAAGTGTATGATGGAGCTTGAAATAGTGCAGATTGAAGATTGGTAGAACGCTATCGTGACTGAATTGTCCTGATGCGTCAAAAAGTTCGAAGACATAGTTCGAAGACGTATCAGACTGCGTTCGTGCACCAGTGCATCATTCTCATTGAAATGAATGGTTTGTGAGCGCtacagaatgtatttattgcacTCTGCTTGACAAATTGCCTTTTAAGTGTTGCTgtattaaagtattggcactccTAGCTCTGCTTGGGTTGCTGGCTACTACTTCAGCCGGCCAACCAACTTGCTGTGTTGCTCTTGTACTTAATAGTTCACTCTGTTATGGAGACATCCAACTGAGCCAAGAACATTTTAATGTACAATAAGTTATatgtctattttttaaaatatcatatcaaaGAAAATCAACATTTTGAATAGTTCCATACTAACTGTGCTCATTACTAGTTATCAGCCCACAGCCTCCAGAGAAAAGATTGACAGATCTTGAATAATGTACTTGAATAATGTACTTGAATAATGTACGGATAGTTATGGGTTCGGTACTAAGAATTGGCCGATACTCCGAGCTCCGGGAGCGCTCGTTCCCTAATGAACACGATTAGATCCAGTGCGTTCCTTTGCACTATGCATACAGTAACTGCAATGATATTGAATGTAAGGAAAATTGTTATTTATGGTGAACATGATGAGTGTGTCAGAGGTTacacataatgtaataatatataatataaaacatatttaatcatAACAGAATGTAAATGGTCTATACATTAAAACAGTAAATGCTTTTTTGCCTCTTAAATTATggtttttattaaacagtttgAGTTGGAAAACGATTGCATTACATACATAAATAGCAGTTGGTTCATTGGCAGTGGATTTATGTTACGTGTGGATGTAGATCACAATGCTCAGGTAATAAAGTGcagaaatccaaaaaaaaaa
>XM_026947065.2
AAGGTATCTGACACTTAGCAACAtgtgcatagcaacagataCAGCGCCAGATGGCTACAAAGTGGCCTATATGGCGTGTGCTAAAAGCGTAATTACATGGTACATGTATTTTACAGACTGGCACCTCGATGTATAAATGGTACATTACAAACCATTACTTCTGTATGTTTCCTGTCACTCAGAAGTACGTCTGGCTATGATTAACATCATGCTTATAGACGCTCCTGGTGGTGAATGACGCAACGTGCATGCGGAAATTCACATTAATCTTTTTGGTGGCTGGTTGGTGACACGCTCTTCAGTTCTCCTCAGCTCTAACGCGAGAAGAAGTGCTGAAGGATTTGCACTGAAGCGGCACAATGGATATATTAGTGAAAGAAGGCTCGCTGTTTTTACAGGGAGTCAAATTTGGAAAGATCTGGAGGAAGATTTGGGTGACAGTGTTTAAGCCTAGCCAGGCGGGAATCGGTCGCATTGAGATGTATGACATGAGGGAAGGAGCAGGCATGTCTGCGAAGCTTGCCATGCTAAAGAAAGCTGAGAAGCGGGTGATCCGGCTGGCAGAGTGCCTCAGCGTGACGCCGGCGCTGGGTGAAAGTTGCCCGGCAGGCTGCACAGCCTTTTACCTCAACACAGCTCAGCGCATCTACACTCTGGCAGCGCCGACGCAGGACGAATGGGTAtctgctctctgctctctgGCATTTCAGTGGAACGAGGGAGGTGGCGAGGCCAGGAGAGCGCAGggagatggtggtggtgatgatgcgCCCATGACTGAAAACGACATCTACTCCACCTTGAGTCCAGGTCAGTTccaggtgacggtggcaagctCAGAGGCATCCATTCGTTGCTGCATGTTCGGATCGTACCTGCTGTCCCCTGAGAAAGAGTCCCTGTGCCTGCTGAACATGAAGACAGGCCATGCTGCGTTCTGCTGGCCGTATCGCTTTCTCCGCAGATTTGGCCTGGTCAAGGAAGGAATAACTATCGAGGCAGGCCGTCGTTGCCAAACAGGAGAGGGCCTCTTCATTTTCCTTTCCAAGCAGGGGCCACAGATCTACCGGGCTATCGAGGAGGCCATCATGCATCAAAGCGTGCAAGACCTGCTGTCCAAAGCTACCGCTTTGCCGCAAGAGAATACGCTCCCACCGCCACCGCCACCGCCACCGCAAACAGCCAGTCCGGCATCTCCAAAATCTGGCATCTCTCGAAGAAACCTTGCACTACCTGCACTTCCCGGCACAAAACCCCCCATCAGAAGCCCTCAACCTGAATCTACCTGAAGCACTGTATGCCAAGGTAAAGCCTCTGCCCAAACCAAGAAATGTACCGACACCTCCAGCTTTGCCTGTGCCCAAACTCATGCCTGAGCCAGAGACAAAGCCAAAAGATTTGGACATTAGTGACCAGGAACCTGACTATGAGTCCTGTGACTGGAACCAGAAAACCCAGACGAAGGAGGACAGTTCTGACAGTCAGTTGTACAGCACAGTCAGACCTCTGCTCCATACCAGAAGAAAACCCGATGTAGATACCAACCAAGAGCAGCTTAAAAGCAGCCGACAGTCTCCCGAATTTGGCCACGCCGAAGTCCCGGTCAGCTTCAAACAAATCCTATCCGATGTTCTCTTCAAAGATGTGACCAGGATCGCACCACCTCCTCCACCCAAAACATACAGAGAGAACTCAAATCTCTCAGCTGAACCGGATTACTATGAGATCCAGAAATGAACTAACCACTATTAAAAGAAACCCAACCGTAGTGTGTTCGGAAGGTCTGAAGCAACGTGGATCTGATTTCCCAGCTGTTGTAAAACCTTCGTGCAAAAATGCTTTTTCTATCAGGTCTCAATTTGATTTCTCTGGTACCAAGTGTATGATGGAGCTTGAAATAGTGCAGATTGAAGATTGGTAGAACGCTATCGTGACTGAATTGTCCTGATGCGTCAAAAAGTTCGAAGACATAGTTCGAAGACGTATCAGACTGCGTTCGTGCACCAGTGCATCATTCTCATTGAAATGAATGGTTTGTGAGCGCtacagaatgtatttattgcacTCTGCTTGACAAATTGCCTTTTAAGTGTTGCTgtattaaagtattggcactccTAGCTCTGCTTGGGTTGCTGGCTACTACTTCAGCCGGCCAACCAACTTGCTGTGTTGCTCTTGTACTTAATAGTTCACTCTGTTATGGAGACATCCAACTGAGCCAAGAACATTTTAATGTACAATAAGTTATatgtctattttttaaaatatcatatcaaaGAAAATCAACATTTTGAATAGTTCCATACTAACTGTGCTCATTACTAGTTATCAGCCCACAGCCTCCAGAGAAAAGATTGACAGATCTTGAATAATGTACTTGAATAATGTACTTGAATAATGTACGGATAGTTATGGGTTCGGTACTAAGAATTGGCCGATACTCCGAGCTCCGGGAGCGCTCGTTCCCTAATGAACACGATTAGATCCAGTGCGTTCCTTTGCACTATGCATACAGTAACTGCAATGATATTGAATGTAAGGAAAATTGTTATTTATGGTGAACATGATGAGTGTGTCAGAGGTTacacataatgtaataatatataatataaaacatatttaatcatAACAGAATGTAAATGGTCTATACATTAAAACAGTAAATGCTTTTTTGCCTCTTAAATTATggtttttattaaacagtttgAGTTGGAAAACGATTGCATTACATACATAAATAGCAGTTGGTTCATTGGCAGTGGATTTATGTTACGTGTGGATGTAGATCACAATGCTCAGGTAATAAAGTGcagaaatccaaaaaaaaaa
>XM_026947066.2
TTGTCAATCAAAAATACACCACAACTGTCTTCTTTTTATGCCCAATATAAACAGCAGCTGTGCCAATTGATGTGAACCTGGGATGATTGACAGTTGACAGCATACATGTTCTGACAtactggaagccccgcccccttccacCATCTCACCTTAGTACTCCTTTGGCCCATGCTCTTACCTCTGCTCAATTTTCCCGCTTGAAGGATGCACTGACGTGGCgccctcgctttctgtcaagAAGATCTGGAGGAAGATTTGGGTGACAGTGTTTAAGCCTAGCCAGGCGGGAATCGGTCGCATTGAGATGTATGACATGAGGGAAGGAGCAGGCATGTCTGCGAAGCTTGCCATGCTAAAGAAAGCTGAGAAGCGGGTGATCCGGCTGGCAGAGTGCCTCAGCGTGACGCCGGCGCTGGGTGAAAGTTGCCCGGCAGGCTGCACAGCCTTTTACCTCAACACAGCTCAGCGCATCTACACTCTGGCAGCGCCGACGCAGGACGAATGGGTAtctgctctctgctctctgGCATTTCAGTGGAACGAGGGAGGTGGCGAGGCCAGGAGAGCGCAGggagatggtggtggtgatgatgcgCCCATGACTGAAAACGACATCTACTCCACCTTGAGTCCAGGTCAGTTccaggtgacggtggcaagctCAGAGGCATCCATTCGTTGCTGCATGTTCGGATCGTACCTGCTGTCCCCTGAGAAAGAGTCCCTGTGCCTGCTGAACATGAAGACAGGCCATGCTGCGTTCTGCTGGCCGTATCGCTTTCTCCGCAGATTTGGCCTGGTCAAGGAAGGAATAACTATCGAGGCAGGCCGTCGTTGCCAAACAGGAGAGGGCCTCTTCATTTTCCTTTCCAAGCAGGGGCCACAGATCTACCGGGCTATCGAGGAGGCCATCATGCATCAAAGCGTGCAAGACCTGCTGTCCAAAGCTACCGCTTTGCCGCAAGAGAATACGCTCCCACCGCCACCGCCACCGCCACCGCAAACAGCCAGTCCGGCATCTCCAAAATCTGGCATCTCTCGAAGAAACCTTGCACTACCTGCACTTCCCGGCACAAAACCCCCCATCAGAAGCCCTCAACCTGAATCTACCTGAAGCACTGTATGCCAAGGTAAAGCCTCTGCCCAAACCAAGAAATGTACCGACACCTCCAGCTTTGCCTGTGCCCAAACTCATGCCTGAGCCAGAGACAAAGCCAAAAGATTTGGACATTAGTGACCAGGAACCTGACTATGAGTCCTGTGACTGGAACCAGAAAACCCAGACGAAGGAGGACAGTTCTGACAGTCAGTTGTACAGCACAGTCAGACCTCTGCTCCATACCAGAAGAAAACCCGATGTAGATACCAACCAAGAGCAGCTTAAAAGCAGCCGACAGTCTCCCGAATTTGGCCACGCCGAAGTCCCGGTCAGCTTCAAACAAATCCTATCCGATGTTCTCTTCAAAGATGTGACCAGGATCGCACCACCTCCTCCACCCAAAACATACAGAGAGAACTCAAATCTCTCAGCTGAACCGGATTACTATGAGATCCAGAAATGAACTAACCACTATTAAAAGAAACCCAACCGTAGTGTGTTCGGAAGGTCTGAAGCAACGTGGATCTGATTTCCCAGCTGTTGTAAAACCTTCGTGCAAAAATGCTTTTTCTATCAGGTCTCAATTTGATTTCTCTGGTACCAAGTGTATGATGGAGCTTGAAATAGTGCAGATTGAAGATTGGTAGAACGCTATCGTGACTGAATTGTCCTGATGCGTCAAAAAGTTCGAAGACATAGTTCGAAGACGTATCAGACTGCGTTCGTGCACCAGTGCATCATTCTCATTGAAATGAATGGTTTGTGAGCGCtacagaatgtatttattgcacTCTGCTTGACAAATTGCCTTTTAAGTGTTGCTgtattaaagtattggcactccTAGCTCTGCTTGGGTTGCTGGCTACTACTTCAGCCGGCCAACCAACTTGCTGTGTTGCTCTTGTACTTAATAGTTCACTCTGTTATGGAGACATCCAACTGAGCCAAGAACATTTTAATGTACAATAAGTTATatgtctattttttaaaatatcatatcaaaGAAAATCAACATTTTGAATAGTTCCATACTAACTGTGCTCATTACTAGTTATCAGCCCACAGCCTCCAGAGAAAAGATTGACAGATCTTGAATAATGTACTTGAATAATGTACTTGAATAATGTACGGATAGTTATGGGTTCGGTACTAAGAATTGGCCGATACTCCGAGCTCCGGGAGCGCTCGTTCCCTAATGAACACGATTAGATCCAGTGCGTTCCTTTGCACTATGCATACAGTAACTGCAATGATATTGAATGTAAGGAAAATTGTTATTTATGGTGAACATGATGAGTGTGTCAGAGGTTacacataatgtaataatatataatataaaacatatttaatcatAACAGAATGTAAATGGTCTATACATTAAAACAGTAAATGCTTTTTTGCCTCTTAAATTATggtttttattaaacagtttgAGTTGGAAAACGATTGCATTACATACATAAATAGCAGTTGGTTCATTGGCAGTGGATTTATGTTACGTGTGGATGTAGATCACAATGCTCAGGTAATAAAGTGcagaaatccaaaaaaaaaa

Function

symbol description
dok3 Orthologous to human DOK3 (docking protein 3).

NR:

description
docking protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026947064.2 False 2832 mRNA 0.46 5 23285708 23294551
XM_026947065.2 True 2832 mRNA 0.46 5 23285708 23294554
XM_026947066.2 False 2657 mRNA 0.46 5 23285708 23297814

Neighbor

gene id symbol gene type direction distance location
unc5a unc5a,LOC107677380 coding downstream 250535 22826944 ~ 23035173 (-)
faf2 faf2,LOC107594931 coding downstream 521837 22755981 ~ 22763871 (-)
cdhr2 NA coding downstream 555855 22706554 ~ 22729853 (-)
LOC113546904 LOC108258503 coding downstream 588885 22678164 ~ 22696823 (-)
LOC113546927 ctnnb1,LOC108256545,LOC108414240,LOC103034575,LOC107710337,LOC107706261,LOC107688361,LOC107654753 coding downstream 608960 22661560 ~ 22676748 (-)
LOC113546952 ddx41,LOC107749764,LOC107750345 coding upstream 135 23297949 ~ 23309411 (-)
abhd18 abhd18,LOC104944271 coding upstream 31955 23329769 ~ 23338185 (-)
nfkb1 nfkb1,LOC106611703,LOC106604768 coding upstream 94291 23392105 ~ 23428221 (-)
ube2d2l ube2d2l,ube2d2,UBE2D2,ube2d3,LOC103039786,LOC106611705,LOC105015883 coding upstream 133395 23431209 ~ 23442597 (-)
polr2b polr2b,LOC102791558,LOC107750329 coding upstream 456741 23754555 ~ 23766898 (-)
G215608 NA non-coding downstream 219907 23065567 ~ 23065801 (-)
G215606 NA non-coding downstream 226887 23058613 ~ 23058821 (-)
G215596 NA non-coding downstream 276398 23009071 ~ 23009310 (-)
G215594 NA non-coding downstream 278911 23006594 ~ 23006797 (-)
G215589 NA non-coding downstream 286242 22999221 ~ 22999466 (-)
G215751 NA non-coding upstream 30530 23328344 ~ 23328571 (-)
G215895 NA non-coding upstream 324562 23622376 ~ 23622605 (-)
G215893 NA non-coding upstream 411738 23709552 ~ 23751577 (-)
G216375 NA non-coding upstream 928738 24226552 ~ 24380193 (-)
G216376 NA non-coding upstream 1008043 24305857 ~ 24361624 (-)
G215624 LOC108277208 other downstream 129042 23134919 ~ 23156666 (-)
cltb cltb,LOC107750349,LOC107677378 other downstream 506640 22769637 ~ 22779068 (-)
smim13 smim13,LOC107559689,LOC107669968,LOC107551766,LOC107734024 other downstream 581225 22656542 ~ 22704483 (-)
LOC117598969 NA other downstream 865798 22399685 ~ 22419910 (-)
LOC117598814 NA other downstream 921443 22326726 ~ 22364265 (-)
fam193b fam193b,LOC107579325 other upstream 15072 23312886 ~ 23327942 (-)
LOC113546965 dgkq,LOC107595737,LOC107749781,LOC107587098 other upstream 58339 23356153 ~ 23389259 (-)
usp7 usp7 other upstream 1242958 24540772 ~ 24588450 (-)
grin2aa grin2a,LOC107690256,LOC107685916,LOC107568390 other upstream 1383423 24681237 ~ 24804340 (-)
dexi dexi,LOC107590611,LOC107733843,LOC107567922 other upstream 1623040 24920854 ~ 24923257 (-)

Expression


Co-expression Network