mcl1b (LOC108268142,LOC100304882)


Basic Information

Item Value
gene id mcl1b
gene name LOC108268142,LOC100304882
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 18691583 ~ 18693788 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026926549.2
aaaaaaaacacagactgcGCAGAAGCACTTCCGCCTTCGCGTATTGAAAGCCCGTGTGAAACACGGTAGTTTGAGAACTCGTAAGACAAAATGTAACGATTATTGGTTTCTCAGACTTCTTCTCAAGCTTCAGCTCAATTTCTGcgtattcatttttaaacaggaaCCTCGCTATGATGTTTAGTCCAAAGGATTTGTCTGTAACCGTGCCTAACGTTCCCTCAGGGTGCAAAGAAAAGCCGTTTGCGGTCGTCGCTCCTATTCCGAGACCCACACTGAATTTAGGAATTTCCCCAGAAAACCAGCGCGGTTTGCCCGATGGCTCTTTACCGACTTCCCCCGAGTCTGACTGCGACGAAGTGCCAGGCGTCGGCTGCTTCCTGGAGCACGACACGCGAGAGCTTATCGTCGAGTTATTTTTGCTCTTGACCTCTTCTTCTCGCCGTTGTGGACGACATAATAAGGTTTTACACACCATGAAGCGCGTTGTTGACAGCCTGCTGGTCAAGCACGAGCTTGTATATAAAGGGATGCTTGTAAAGCTGGGTTTGGACGAGAGAGGAGATGACATGAGTGTGATTAGCTCAGTGGCCAAGGAGCTCTTCAGTGACGGCATCACAAACTGGGGTCGCATTGCCAGCCTGCTCGCCTTTGGGGCAGTTGTGTCTCAGTATGAGAAGCAGTCTGGACGAGGGCACTGTGTAAGCCTTGTAGCAGAAGAGATCTCTTCCTATCTTCTGTACAATCAAAAGGAGTGGCTTCTGAAAAATAACTCATGGGAGGGCTTTGTGGAATTTTTTCACGTTCCTGATCCCGAATCTTCAGTGAGGACCGCATTAACGACCTTTGTTACTGTGGCAGGTATTGGGGCTGTTCTTGCCTATTTGACAAGATAAGTGCCACTGGACCTTCTGACTGACTTTGGACTTTGCTGTAAAGTGATAAAAGAATATGAGCAGTCTGCTTTCAAGAACTCCATTCTAAAACTAGTCTGGACTATATAAAATTTGATGAGGCTTAAATAGCTCcattattgtgcattttattcatgaagagtttattttttttattaaaatgtttcttaaaaCACTAtctcacaaaatgtttttttttgtccagaaaCCAAGATTGTTTTTGTGTTGATTGATTGTTGACTTTCAAAAGAAGCTCAAAACATTTGCAAGACATCATATATTACTTACAGATATGTTTAAGAGCACAATGATGTGGTACTGTGACTATATGGAGCTGTTGTCTCAGGCCTTAGTTACTGTTTATCCTGAGGAATAAGCTGAAGGTGCTTACTACATATAACTGTACAATCTAAGGATCTTTGCCATAGATAGAAAATTTCACTTTGTACAAACATTTTGgtgccatttttttgttttgaatttggtTTTTGGACAGGCTTGTGGTTGAGGAAGTTCTGACCCTTCAGCACGTTCATCCAGTTCCTTTCTGTTTTCACACTGAAATGGTTTTGTAGAGAAGAGAGATCATGTAATAAAACTGATTgcttcatgta

Function

NR:

description
PREDICTED: induced myeloid leukemia cell differentiation protein Mcl-1-like

GO: NA

KEGG:

id description
K02539 MCL1; myeloid leukemia cell differntiation protein MCL-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026926549.2 True 1528 mRNA 0.42 3 18691583 18693788

Neighbor

gene id symbol gene type direction distance location
tmod4 tmod4,LOC107663362,LOC107689841 coding downstream 27952 18654139 ~ 18663631 (-)
lysmd1 lysmd1 coding downstream 42721 18645148 ~ 18648862 (-)
kcnj14 kcnj14,LOC107749008,LOC107685531,LOC107596661,LOC103364940 coding downstream 351314 18324900 ~ 18340269 (-)
myh14 LOC108272574,LOC108429041 coding downstream 367959 18287082 ~ 18323624 (-)
si:ch211-120k19.1 LOC108268252 coding downstream 411221 18276347 ~ 18280362 (-)
LOC113533916 ctss coding upstream 48255 18742043 ~ 18751460 (-)
ctsk catk,ctsk,LOC108441922 coding upstream 62400 18756188 ~ 18760227 (-)
hapln2 hapln2 coding upstream 163760 18857548 ~ 18860680 (-)
nes nes coding upstream 290990 18984778 ~ 18991821 (-)
gpatch4 gpatch4 coding upstream 304543 18998331 ~ 19002364 (-)
G10166 NA non-coding downstream 277175 18413706 ~ 18414408 (-)
G10124 NA non-coding downstream 330553 18360807 ~ 18361030 (-)
G10121 si:dkey-27n14.1,LOC108263335,LOC108428912,LOC107749301,LOC107685608,LOC107596760 non-coding downstream 335631 18354911 ~ 18355952 (-)
G10083 NA non-coding downstream 493237 18198127 ~ 18198346 (-)
G10082 NA non-coding downstream 493550 18197318 ~ 18198033 (-)
G10275 NA non-coding upstream 89229 18783017 ~ 18783447 (-)
G10314 NA non-coding upstream 146018 18839806 ~ 18840038 (-)
G10461 NA non-coding upstream 161737 18855525 ~ 18980359 (-)
G10460 NA non-coding upstream 205634 18899422 ~ 18908394 (-)
G10486 NA non-coding upstream 302955 18996743 ~ 18998015 (-)
sema6e sema6c,sema6e,LOC108429044,LOC107587820 other downstream 184060 18383588 ~ 18507523 (-)
G10064 NA other downstream 494822 18188563 ~ 18196761 (-)
G10068 nop2,LOC107685519,LOC107749104,LOC107699935,LOC104957145 other downstream 517017 18172187 ~ 18174566 (-)
gask1a fam198a other downstream 1294610 17377902 ~ 17396973 (-)
id4 id4 other downstream 1943999 16744702 ~ 16747584 (-)
ensab ensab,LOC108268136,LOC108441925,LOC103045558,LOC107741750,LOC107587831,LOC107663348,LOC107597988,LOC107732479 other upstream 1248 18695036 ~ 18701005 (-)
rrnad1 rrnad1 other upstream 131593 18825381 ~ 18832204 (-)
ccn4b wisp1,wisp1b,LOC107714595,LOC107724778,LOC107587903,LOC107552812 other upstream 848571 19542359 ~ 19547501 (-)
trnaq-cug_4 NA other upstream 992720 19686508 ~ 19686867 (-)
trnaq-cug_5 NA other upstream 996205 19689993 ~ 19690064 (-)

Expression


Co-expression Network