ankfy1 (ankfy1,LOC107597410,LOC107664513,LOC107587357)


Basic Information

Item Value
gene id ankfy1
gene name ankfy1,LOC107597410,LOC107664513,LOC107587357
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 8105031 ~ 8122841 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922052.2
GTGTCTCCGTGTTCTCGCGATACTTACCCTGCGGTTTCACCGTGTTCTCGCGAGAACACACAACCAGCCGCGGATCCAACATGGCGGAAGAGGAGGTGCAGAAACTGCAGAAGCACCTGTCCTTGCTGCGGCAGGAGTATGTCAAAATGCAGCAGAAGCTGGTGGAGACGGAGAGGAGGTGCTCCCTGCTGGCGGCGCAGGCCTCCGGTCACGGCTCCTCCTCCTCACAGCCCAGCGACTCCTTCATCAGCCGCCTGCTGGCCATCGTAGCTGAACTTTATCAGCAAGACCAGTACAGTGACCTGAAAGTGAAGATCGGACAGGAGCAGCTGAGTGCCCATAAGTTTGTCCTGGCAGCGCGCAGTGACGTCTGGAGCCTGGCCAACATGGCTTCCACGTCCGAGCTTGACCTGTCAGAGGCCAAGCCGGAGGTTGCCATGGCGATGCTGCGCTGGGCTTACACAGATGAGCTAGAGCTGTGCGAAGACGACACCTTCCTCATTGACCTGATGAAGCTGGCCAACCGCTTTCAGCTTTACCTCCTACGAGAGAGATGTGAGAAAGGAGTAATGTCGTCAGTAAACGTGAGGAACTGCATTCGGTTCTACCAGACGGCCGAGGAGTTGGACGCTACCACACTGATGAACTACTGCGGTGAAATCATCGCCAGCCACTGGGACGACCTGAGGAAAGAGGACTTCAGTACTATGAGTGCTCAGCTGCTGTATAAGATGATCAAATCCAAGACTGAGTTTCCTCTTCACAAAGCCATTAAAGTGGAGAGGGAGGATGTGGTCTTCCTGTATCTTATCGAGATGGATGCTCAGCTGCCAGGGAAGCTGAATGAACTGGACAATAATGGAGATCTGGCTCTGGATCTGGCCTTATCCAGGAAACAGGAGAGCATTGCCACCACCTTGGTCAACAACAAAGCAGACGTGGACATGGTGGATCAGAGTGGCTGGAGCCTCCTGCACAAAGCCATCCAGAGAGGAGATGAGTTTGCTTCCACCTTCCTGATCCGCCACTCAGCCCAGGTGAACGCAGCCACAGTGGGGGCAGTGGAGACGCCGCTGCACCTCGTCTGCTCCTTCAGCCCAAAGAAACACAGCGCCGAGGTGATGAGCGGCATGGCCCGCATTGCAGAGGCCTTGCTCAAAACCGGCGCCAACCCCAACATGCAAAACAGCAGAGGACGAACACCTTTACATGAAGCAGTGCTGTCAGGAAACGAACCTGTGTTCAACCAACTCCTGCAGTGCAAACAACTGGACATGGATCTGAAAGACCATGAGGGGAATACTGCTCTGTGGCTGGCCCTGCAGTACATTACAGTAGCATCTGATCCCTCCATTAACCCCTTCGACGATGACGCCCCTGTAGTTAACGGCACCTCATTTGATGAGAACAGCTTTGCGGCTCGACTTATACAAAGAGGAAGCGATCCCAATGCTCCAGATGCCTCAGGAAACTGCCTCATTCAGAGAGCAGCCCTTGCAGGAAGTGAGGCAGCTGCCATCTTCCTGGCTACCCATGAAGCAAAGGTCAATCATACCAATAAATGGGGAGAAACTCCCCTGCACACAGCGTGTCGTTGCGGattagcagctctgacagctgaGCTTCTGCAGCAGGGAGCCAATCCTAATCTACAAACCCACACTGCCTTGCCTGACGCAGGGGACCGGAGCCATGGTGTCTCCTTACAGAGCCCTCTGCACATGGCCATCGTTCACAACCACCCCGACGTTGTGTCTGTCATACTAGAGCAGAAAGCCAATGCACTCCATGCCACCAACAACCTACAGATCATCCCAGACTTCAGCCTTAAAGATTCCTTGGACCAGACTGTGCTCGGACTTGCTCTCTGGACAGGAATGCACATCATTGCCGCACAGCTCCTGGGGTCAGGGGCAGCCATTAATGATACCATGTCAGATGGCCAGACTCTTCTCCACATGGCCATCAAGAGACAGGACAGCAAGAGTGCCCTCTTCCTGCTAGAGCACCAGGCAGACATCAATGTAAGGACTCAGGAGGGACAGACAGCCCTGCAGCTGGCCATCAGTAACCAGCTCCCCTTGGTGGTGGATGCTATCTGTACACGTGGAGCAGACATGTCAGTGGTGGATGAGAATGGAGATCCTCCACTGTGGCTGGCCTTAAAGAATGGCCTGGAGGATATTGCCTCAACGCTGGTCAGGCATGGCTGTGACGCAACATGCTGGAGTACGGGACCGGGAGGGTGCCAGCAGACGTTGCTGCACAGAGCCATCGATGAGAACAATGAGGTCTCCGCCTGCTTCCTTATACGCAGtggctGTGATGTGAACAGTCCTCGGAGGCCTGGTACTAACGGAGAGGGAGATGAGGAGGCGCGAGATGGTCAGAGCCCTCTGCACCTGGCCTCCTGCTGGGGCCTCGAGGAGGTGGTGCAGTGCCTTCTGGAGTTCGGAGCCAATGTTAATGCACAGGATGCAGAAGGCCGGGCGCCAATCCATGTGGCCATCAGTAACCAGCACAGCGTGATTATCCAGCTTCTCATCTCACACCCAGACATCCGGCTGAACCTGAGAGACCGACTGGGCACGACGCCATTTGCCTGTGCCATGACTCACAAGAACAACAAAGCAGCAGAAGCCATCCTCAAAAGAGAGCCTGGAGCAGCCGAGCAGGTTGACAACAAGGGACGTAACTTCCTTCACATAGCTGTGCAGAACTCTGACATTGAGAGCGTGCTTTTCCTGATCAGCGTGCAGGCTAACGTTAACTCCAGAGTGCAGGATGCAGCCAAACTCACACCACTGCACCTCGCCGTGCAGGCCGGCTCTGAGATCATTGTGCGCAACCTGCTTCTAGCAGGTGCTAAAGTGAACGAGTTGACTAAACACCGTCAGACGGCTCTACATTTGGCGGCGCAGCAAGATCTGGCCACTATTTGCTCTGTGCTGCTCGAAAATGGTGTTGATTTCCCAGCTGTTGATGAGAATGGAAACAATGCTCTACACCTAGCTGTGATGCAGGGACGTCTCAATAATGTGCGAGCTCTTCTCACCGAGTCAAACATTGACGCAGAGGCCTACAATCTCAGGGGCCAGTCTCCAATGCATGTTCTTGGACACTATGGGAAGGAAAATGCGGCAGCCATCTTTGAGCTGTTCTTGGAATGTATGCCAGAATATCCTCTGGATAAACCGGATAGTGAAGGGAATACAGTTCTTCTGTTGGCTTATATGAAAGGAAACGCTAATCTCTGTCGTGCTATTGTGAGGGCTGGAGCTCGTCTGGGTGTCAACAACAATCAGGGCATAAACATCTTCAACTATCAAGTGGCCACTAAGCAGCTCCTCTTCCGCCTCCTAGATATGCTGTCCAAAGAGCCCCCATGGTGTGATGGCTCCAACTGTTACGAATGTGCTGCCAAGTTTGGAGTCACTACAAGAAAGCATCACTGCCGTCACTGTGGCCGCTTGCTCTGCCACAAGTGCTCCATTAAGGAGATCCCCATCATCAAATTCGACCTGAACAAGCCAGTCCGCGTGTGTGATATTTGCTTCGACGTGCTAACTTTGGGTGGAGTTTCCTAACACACTAGCAGGACATGGGCGATGCACACACTAAACTGGACCGTGGTGGTTAAAAaggtggagagggagagaagggagGAAAAAAGCATGGACTAAATGTATGGACCACAGTTTTTACTACTATTGCAGACATCTCTGAACAAAAcaactgtgtatgtatgttctAGTACCAACTAGATCAAGGAAAATTAAAGTAGTGCAGGAGTTCTTAACTCTAATCTTGAGGACCCTGTGTTCTGTGACACCCTTGAGCTAATTATTGAAGGagaaatccaccctgaatgacgtACATATCAATATTTAGAATCAATATGCCATCTTCAGTGGTGCAGATGATTTATTTTAGGATTGACGTTTTTGGGTTGAACTAAAATCATCATGATGGACTATTTTCTCTATGGTTACTGGCTTCCTccgttacccacaatgccatttgaatACCTTCTGATAGTAATGCCAGTGGGAATTCATttctacctttaaaaaaaagagagatgcagcagtgctttagtccttacgtctgtccagctctctcacctcctcatctatacactctgctcaaacagaatTTAACAAAGCTTAATCGTTCACGCTAACACTGCCGTCACAACCATCGTGCTTGTAGATCGCTGAGAAGCCGAGTTAACTTGGCGCAAGTGCATCatgtagctgcattgcattctggaactttgagtccaacgttTGCTGTATCTGCTATTTCTacgtgagtgagaaaagaagctcgtGCTAAGGAGCGAAGAGACGTACCTCACCATTATCCCGTACGTTTGAGAGAGGTAATTCCCCCCTTTTACACGCTACTGTAACCTGGCTAGCAgtgtccccctgtgacatcagagcagctaacttctcacaggtataacgaaaatacagcaccaaaaTCTCTAAGCACATTACAGATTccattataaacacatttaatgtgtttcagggtgaagttttcctttaatgacaATGGTCTGTTGAGAATATGGACTTCAGATTGTGCATGGTATGGGGTCTGCATGACTGGAGTTAAGAACCTCTGAAGTAGCAGAATGCTATTGAAGTAGACCTAGTAGGTGTTGTAGGTGCCAGGCCTGAAGAAAGAAACCGATAATGGGGGAAGCTGTAGAGGGAATGATTATAGACCTGTagaaattaattacaaaatcaaCATCAGTCAtcatagtgtttaaaaaaaaaaaaacacacacacatacatagattTGAAGATTATTTCATTAGCGAGCACTGACTATGAAGAATGATGGAATCTGAAGGAAGAATCTGAATGAAGAATTATCCCTGATCGGATAATTAGCCGTTCCTCTCGAGAGGGTTTAAAGCCTTAATCACGTTGGCCTGAGTGATGCTTTTTGTTTAGTCTAAAACAAGGAGCGTTTATGAACCTTTACTATTTTCTTGCACCTATCAAGGTCTACACAGGGAATTATCACCCTGAAGAcctcaaaataatgaaacacaAGGTTAACTCGACGTCAAGCACATTGCAGTAAACGATATGATTTTTACTTTGTCTTCTATTATTTAATCCTTGTTGTGCATCAGTTCAAGATCATTAATCAGTGAGGAATCTGCATATTAAATGCACTTTTTATTCTtccattaatatttttttaagatattcATGACACGTTCACAGCAAAAGCAAACTGTCATTTTTGTGACCcgaacaaaaagcaaaaaaaaaaactttactatTACCAAGTAAACTGAGGTTTTAGGTGCAGAAGTATGATGAGTTGCCTACTATGCATATGCACGTTTATCATTTTAGCACTGTCCTAATCATTCCAATCACCAAAGCACACATTCCATTAAATCTATGGCATATTACTGAATTTCGGTAAAaggtcatgcttttttttttttttttattattatttttagatctTCAGATTTGCCTGATGTCACATTAAGTTGACcatattatgtttttaaactctTTCTTCTGAAAAGCTAAACAGCTGCACTTTATcatactggatttttttttttttttttcctgatcgTACAAAAGGAGAATGTGACATTCAAGGTTGGAGAGTCCGCAGTCCATTCTAGGTTATGTTAAATTGTACAGCTAATTGTATACTATTTTTGACCACTACAACTGTTTTGTACTTAAACGCAGGTTGTGCTCTTTGCCTCTGTCCGATCTCTTATGCACACTATATTGTATCTGTATGCTCAGATATCTAGCCTGTCACTTCCTCTAGTATCCTTTTCAAGAAAGGGAGGACAACTTTACATTAAGGTCatcagatgattaaaaaaaaaatcaat

Function

symbol description
ankfy1 Predicted to enable metal ion binding activity. Orthologous to human ANKFY1 (ankyrin repeat and FYVE domain containing 1).

NR:

description
rabankyrin-5 isoform X2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K20129 ANKFY1; rabankyrin-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922052.2 True 5897 mRNA 0.47 25 8105031 8122841

Neighbor

gene id symbol gene type direction distance location
zzef1 zzef1,LOC107664510,LOC107598082 coding downstream 7889 8022985 ~ 8097142 (-)
si:dkey-220k22.1 LOC108260280 coding downstream 346812 7663108 ~ 7758219 (-)
slc25a25b slc25a25,LOC107587368 coding downstream 618407 7455590 ~ 7486624 (-)
uap1l1 LOC108260439,LOC108429733 coding downstream 654490 7442211 ~ 7450541 (-)
zdhhc12b zdhhc12,zdhhc12b,LOC103035983,LOC108429732,LOC107712389,LOC107737479,LOC107681847 coding downstream 663037 7434015 ~ 7441994 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432 coding upstream 3426 8126267 ~ 8138398 (-)
ruvbl2 ruvbl2,LOC105888489,LOC107664527,LOC107722783 coding upstream 165727 8288568 ~ 8303964 (-)
ftr83 LOC108260410,LOC108429748,LOC107712363,LOC107587475,LOC107677412,LOC107664511,LOC107722782 coding upstream 183533 8306374 ~ 8312415 (-)
atp5l atp5l,LOC107664523,LOC107597515,LOC108233819,LOC107098727,LOC107587353,LOC107387014 coding upstream 209591 8332432 ~ 8336247 (-)
abcg4a abcg4,abcg4a,LOC108261268,LOC108429752,LOC107717882,LOC107722792,LOC107677424,LOC107587350 coding upstream 229559 8352400 ~ 8379442 (-)
G383328 NA non-coding downstream 149618 7955171 ~ 7955413 (-)
G382930 NA non-coding downstream 458549 7646122 ~ 7646482 (-)
G382879 NA non-coding downstream 568065 7532291 ~ 7536966 (-)
G382880 NA non-coding downstream 577455 7521896 ~ 7527576 (-)
G382855 NA non-coding downstream 658520 7445793 ~ 7446511 (-)
G383343 NA non-coding upstream 601 8123442 ~ 8123670 (-)
G383356 NA non-coding upstream 22548 8145389 ~ 8145593 (-)
G383359 NA non-coding upstream 25036 8147877 ~ 8148356 (-)
G383362 NA non-coding upstream 28577 8151418 ~ 8154007 (-)
G383366 NA non-coding upstream 39941 8162782 ~ 8163165 (-)
atp2a3 atp2a3,LOC107587360,LOC107597397,LOC107712375,LOC107664518,LOC107748501 other downstream 118298 7889060 ~ 7986733 (-)
camkk1a camkk1,LOC107664416,LOC107587369,LOC107664519 other downstream 209302 7799638 ~ 7895729 (-)
si:dkey-220k22.3 NA other downstream 448907 7649293 ~ 7656124 (-)
G382719 cit other downstream 745060 7275671 ~ 7359971 (-)
LOC113531451 LOC108260064 other downstream 1280587 6809425 ~ 6824444 (-)
pdzd3b LOC108260234 other upstream 215667 8338508 ~ 8348269 (-)
hinfp hinfp,LOC107677425,LOC107662995 other upstream 259854 8382695 ~ 8398355 (-)
G383467 h2afx,LOC106516344,LOC107677420,LOC104950138,LOC100693699,LOC108260105,LOC106527800 other upstream 343518 8466359 ~ 8467012 (-)
timm8b timm8b,LOC107598437,LOC107717885 other upstream 714837 8837678 ~ 8839764 (-)
LOC113531288 NA other upstream 796569 8919410 ~ 9008686 (-)

Expression


Co-expression Network